RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 ARHGAP5Q13017 1502 aa28.25■■■□□ 2.11
DDR1-252ENST00000504152 GPATCH8Q9UKJ3 1502 aaKnown RBP28.25■■■□□ 2.11
DDR1-252ENST00000504152 CFDP1Q9UEE9 299 aaPredicted RBP28.25■■■□□ 2.11
DDR1-252ENST00000504152 AKNAQ7Z591 1439 aa28.24■■■□□ 2.11
DDR1-252ENST00000504152 CFAP74Q9C0B2 1584 aa28.24■■■□□ 2.11
DDR1-252ENST00000504152 CDC42BPAQ5VT25 1732 aa28.23■■■□□ 2.11
DDR1-252ENST00000504152 CDC42BPBQ9Y5S2 1711 aa28.22■■■□□ 2.11
DDR1-252ENST00000504152 ZNF777Q9ULD5 760 aaPredicted RBP28.21■■■□□ 2.11
DDR1-252ENST00000504152 PREX2Q70Z35 1606 aa28.21■■■□□ 2.11
DDR1-252ENST00000504152 PPARGC1BQ86YN6 1023 aaKnown RBP28.16■■■□□ 2.1
DDR1-252ENST00000504152 COL17A1Q9UMD9 1497 aaPredicted RBP28.15■■■□□ 2.1
DDR1-252ENST00000504152 ITSN2Q9NZM3 1697 aa28.15■■■□□ 2.1
DDR1-252ENST00000504152 SCAPERQ9BY12 1400 aa28.13■■■□□ 2.09
DDR1-252ENST00000504152 ADGRL1O94910 1474 aa28.13■■■□□ 2.09
DDR1-252ENST00000504152 RAPGEF3O95398 923 aa28.12■■■□□ 2.09
DDR1-252ENST00000504152 DENND4BO75064 1496 aaPredicted RBP28.11■■■□□ 2.09
DDR1-252ENST00000504152 KDM4FA0A1W2PPD8 638 aa28.09■■■□□ 2.09
DDR1-252ENST00000504152 MYOM3Q5VTT5 1437 aa28.09■■■□□ 2.09
DDR1-252ENST00000504152 ZNF644Q9H582 1327 aaPredicted RBP28.06■■■□□ 2.08
DDR1-252ENST00000504152 HNRNPMP52272 730 aaKnown RBP eCLIP28.05■■■□□ 2.08
DDR1-252ENST00000504152 PLEKHH2Q8IVE3 1493 aa28.05■■■□□ 2.08
DDR1-252ENST00000504152 MIA2Q96PC5 1412 aa28.05■■■□□ 2.08
DDR1-252ENST00000504152 SAMD9LQ8IVG5 1584 aa28.03■■■□□ 2.08
DDR1-252ENST00000504152 KIAA1107Q9UPP5 1409 aa28.03■■■□□ 2.08
DDR1-252ENST00000504152 AFAP1Q8N556 730 aa28.01■■■□□ 2.07
DDR1-252ENST00000504152 ABCC1P33527 1531 aa28■■■□□ 2.07
DDR1-252ENST00000504152 RSPH4AQ5TD94 716 aa27.99■■■□□ 2.07
DDR1-252ENST00000504152 ARHGEF12Q9NZN5 1544 aa27.98■■■□□ 2.07
DDR1-252ENST00000504152 POGZQ7Z3K3 1410 aa27.98■■■□□ 2.07
DDR1-252ENST00000504152 RICTORQ6R327 1708 aa27.98■■■□□ 2.07
DDR1-252ENST00000504152 ZNF518AQ6AHZ1 1483 aa27.97■■■□□ 2.07
DDR1-252ENST00000504152 MYT1LQ9UL68 1186 aa27.97■■■□□ 2.07
DDR1-252ENST00000504152 CAMSAP2Q08AD1 1489 aa27.95■■■□□ 2.07
DDR1-252ENST00000504152 FGD6Q6ZV73 1430 aa27.95■■■□□ 2.07
DDR1-252ENST00000504152 TRAPPC8Q9Y2L5 1435 aa27.95■■■□□ 2.07
DDR1-252ENST00000504152 SYCP2Q9BX26 1530 aa27.94■■■□□ 2.06
DDR1-252ENST00000504152 FRMPD1Q5SYB0 1578 aa27.93■■■□□ 2.06
DDR1-252ENST00000504152 MBD5Q9P267 1494 aa27.9■■■□□ 2.06
DDR1-252ENST00000504152 PTPN23Q9H3S7 1636 aa27.9■■■□□ 2.06
DDR1-252ENST00000504152 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.06
DDR1-252ENST00000504152 TSPY4P0CV99 314 aa27.89■■■□□ 2.06
DDR1-252ENST00000504152 TSPY10P0CW01 314 aa27.89■■■□□ 2.06
DDR1-252ENST00000504152 SPAG9O60271 1321 aaKnown RBP27.89■■■□□ 2.05
DDR1-252ENST00000504152 FAM50AQ14320 339 aaKnown RBP27.88■■■□□ 2.05
DDR1-252ENST00000504152 ZMYM4Q5VZL5 1548 aa27.87■■■□□ 2.05
DDR1-252ENST00000504152 KDM5CP41229 1560 aa27.86■■■□□ 2.05
DDR1-252ENST00000504152 TCOF1Q13428 1488 aaKnown RBP27.85■■■□□ 2.05
DDR1-252ENST00000504152 MLH3Q9UHC1 1453 aa27.84■■■□□ 2.05
DDR1-252ENST00000504152 CCDC141Q6ZP82 1450 aa27.83■■■□□ 2.04
DDR1-252ENST00000504152 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
DDR1-252ENST00000504152 ZFYVE16Q7Z3T8 1539 aa27.81■■■□□ 2.04
DDR1-252ENST00000504152 HECW2Q9P2P5 1572 aa27.79■■■□□ 2.04
DDR1-252ENST00000504152 YEATS2Q9ULM3 1422 aa27.79■■■□□ 2.04
DDR1-252ENST00000504152 ILDR1Q86SU0 546 aaPredicted RBP27.77■■■□□ 2.04
DDR1-252ENST00000504152 RTEL1-TNFRSF6BF6WH68 1400 aa27.76■■■□□ 2.04
DDR1-252ENST00000504152 ATP10AO60312 1499 aa27.75■■■□□ 2.03
DDR1-252ENST00000504152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.74■■■□□ 2.03
DDR1-252ENST00000504152 KIDINS220Q9ULH0 1771 aa27.74■■■□□ 2.03
DDR1-252ENST00000504152 ABCC5O15440 1437 aa27.73■■■□□ 2.03
DDR1-252ENST00000504152 ATP7AQ04656 1500 aa27.72■■■□□ 2.03
DDR1-252ENST00000504152 ARHGEF40Q8TER5 1519 aa27.72■■■□□ 2.03
DDR1-252ENST00000504152 DAPK1P53355 1430 aa27.72■■■□□ 2.03
DDR1-252ENST00000504152 RRBP1Q9P2E9 1410 aaKnown RBP27.72■■■□□ 2.03
DDR1-252ENST00000504152 ARID4BQ4LE39 1312 aaPredicted RBP27.71■■■□□ 2.03
DDR1-252ENST00000504152 DNMT1P26358 1616 aaKnown RBP27.7■■■□□ 2.02
DDR1-252ENST00000504152 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
DDR1-252ENST00000504152 C9orf84Q5VXU9 1444 aa27.68■■■□□ 2.02
DDR1-252ENST00000504152 ITGAEP38570 1179 aa27.67■■■□□ 2.02
DDR1-252ENST00000504152 CHIC2Q9UKJ5 165 aa27.67■■■□□ 2.02
DDR1-252ENST00000504152 DIP2CQ9Y2E4 1556 aa27.66■■■□□ 2.02
DDR1-252ENST00000504152 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
DDR1-252ENST00000504152 ABCA6Q8N139 1617 aa27.66■■■□□ 2.02
DDR1-252ENST00000504152 SHANK2Q9UPX8 1470 aa27.64■■■□□ 2.01
DDR1-252ENST00000504152 CROCC2H7BZ55 1655 aa27.62■■■□□ 2.01
DDR1-252ENST00000504152 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
DDR1-252ENST00000504152 ANKRD30AQ9BXX3 1397 aa27.6■■■□□ 2.01
DDR1-252ENST00000504152 A2MP01023 1474 aa27.6■■■□□ 2.01
DDR1-252ENST00000504152 DHX29Q7Z478 1369 aaKnown RBP27.6■■■□□ 2.01
DDR1-252ENST00000504152 ADGBQ8N7X0 1667 aa27.59■■■□□ 2.01
DDR1-252ENST00000504152 REREQ9P2R6 1566 aa27.59■■■□□ 2.01
DDR1-252ENST00000504152 MLECQ14165 292 aa27.55■■■□□ 2
DDR1-252ENST00000504152 PTPRKQ15262 1439 aa27.55■■■□□ 2
DDR1-252ENST00000504152 NCOA1Q15788 1441 aa27.55■■■□□ 2
DDR1-252ENST00000504152 PLXNC1O60486 1568 aa27.53■■■□□ 2
DDR1-252ENST00000504152 AGLP35573 1532 aa27.53■■■□□ 2
DDR1-252ENST00000504152 KIF15Q9NS87 1388 aa27.53■■■□□ 2
DDR1-252ENST00000504152 ADGRL2O95490 1459 aa27.51■■■□□ 2
DDR1-252ENST00000504152 SIGLEC1Q9BZZ2 1709 aa27.5■■□□□ 1.99
DDR1-252ENST00000504152 KIF3BO15066 747 aa27.5■■□□□ 1.99
DDR1-252ENST00000504152 ROCK1Q13464 1354 aa27.49■■□□□ 1.99
DDR1-252ENST00000504152 DUOX2Q9NRD8 1548 aa27.49■■□□□ 1.99
DDR1-252ENST00000504152 GGT6Q6P531 493 aa27.47■■□□□ 1.99
DDR1-252ENST00000504152 BCORL1Q5H9F3 1711 aa27.47■■□□□ 1.99
DDR1-252ENST00000504152 ESF1Q9H501 851 aaKnown RBP27.45■■□□□ 1.98
DDR1-252ENST00000504152 ADAMTSL3P82987 1691 aa27.44■■□□□ 1.98
DDR1-252ENST00000504152 PPP6R1Q9UPN7 881 aa27.42■■□□□ 1.98
DDR1-252ENST00000504152 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
DDR1-252ENST00000504152 ANKRD50Q9ULJ7 1429 aa27.38■■□□□ 1.97
DDR1-252ENST00000504152 MADDQ8WXG6 1647 aa27.37■■□□□ 1.97
DDR1-252ENST00000504152 EIF2AK4Q9P2K8 1649 aaKnown RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms