RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 CFDP1Q9UEE9 299 aaPredicted RBP22.78■■□□□ 1.24
SGCA-204ENST00000504073 GPATCH8Q9UKJ3 1502 aaKnown RBP22.75■■□□□ 1.23
SGCA-204ENST00000504073 PTPN23Q9H3S7 1636 aa22.75■■□□□ 1.23
SGCA-204ENST00000504073 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
SGCA-204ENST00000504073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.73■■□□□ 1.23
SGCA-204ENST00000504073 PPRC1Q5VV67 1664 aaKnown RBP22.72■■□□□ 1.23
SGCA-204ENST00000504073 TCOF1Q13428 1488 aaKnown RBP22.72■■□□□ 1.23
SGCA-204ENST00000504073 CDC42BPAQ5VT25 1732 aa22.71■■□□□ 1.23
SGCA-204ENST00000504073 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
SGCA-204ENST00000504073 ABCA9Q8IUA7 1624 aa22.69■■□□□ 1.22
SGCA-204ENST00000504073 TTC37Q6PGP7 1564 aa22.69■■□□□ 1.22
SGCA-204ENST00000504073 ARHGAP5Q13017 1502 aa22.68■■□□□ 1.22
SGCA-204ENST00000504073 ARAP3Q8WWN8 1544 aa22.68■■□□□ 1.22
SGCA-204ENST00000504073 PLEKHH2Q8IVE3 1493 aa22.66■■□□□ 1.22
SGCA-204ENST00000504073 PLCH2O75038 1416 aa22.66■■□□□ 1.22
SGCA-204ENST00000504073 EFCAB2Q5VUJ9 269 aa22.66■■□□□ 1.22
SGCA-204ENST00000504073 ZNF777Q9ULD5 760 aaPredicted RBP22.66■■□□□ 1.22
SGCA-204ENST00000504073 COL17A1Q9UMD9 1497 aaPredicted RBP22.65■■□□□ 1.22
SGCA-204ENST00000504073 CAMSAP2Q08AD1 1489 aa22.63■■□□□ 1.21
SGCA-204ENST00000504073 ITGAEP38570 1179 aa22.63■■□□□ 1.21
SGCA-204ENST00000504073 RSPH4AQ5TD94 716 aa22.62■■□□□ 1.21
SGCA-204ENST00000504073 CDC42BPBQ9Y5S2 1711 aa22.62■■□□□ 1.21
SGCA-204ENST00000504073 GLI2P10070 1586 aa22.61■■□□□ 1.21
SGCA-204ENST00000504073 FBXO41Q8TF61 875 aa22.6■■□□□ 1.21
SGCA-204ENST00000504073 CFAP74Q9C0B2 1584 aa22.59■■□□□ 1.21
SGCA-204ENST00000504073 CD109Q6YHK3 1445 aa22.58■■□□□ 1.21
SGCA-204ENST00000504073 DNMT1P26358 1616 aaKnown RBP22.56■■□□□ 1.2
SGCA-204ENST00000504073 KIAA1107Q9UPP5 1409 aa22.55■■□□□ 1.2
SGCA-204ENST00000504073 FANCAO15360 1455 aa22.54■■□□□ 1.2
SGCA-204ENST00000504073 DAPK1P53355 1430 aa22.53■■□□□ 1.2
SGCA-204ENST00000504073 ARHGEF5Q12774 1597 aa22.53■■□□□ 1.2
SGCA-204ENST00000504073 ZNF644Q9H582 1327 aaPredicted RBP22.53■■□□□ 1.2
SGCA-204ENST00000504073 SAMD9LQ8IVG5 1584 aa22.52■■□□□ 1.2
SGCA-204ENST00000504073 TSPY4P0CV99 314 aa22.52■■□□□ 1.2
SGCA-204ENST00000504073 TSPY10P0CW01 314 aa22.52■■□□□ 1.2
SGCA-204ENST00000504073 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
SGCA-204ENST00000504073 CCDC141Q6ZP82 1450 aa22.49■■□□□ 1.19
SGCA-204ENST00000504073 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
SGCA-204ENST00000504073 SHANK2Q9UPX8 1470 aa22.48■■□□□ 1.19
SGCA-204ENST00000504073 ABCC5O15440 1437 aa22.48■■□□□ 1.19
SGCA-204ENST00000504073 AKNAQ7Z591 1439 aa22.48■■□□□ 1.19
SGCA-204ENST00000504073 TEX14Q8IWB6 1497 aa22.47■■□□□ 1.19
SGCA-204ENST00000504073 NEO1Q92859 1461 aa22.47■■□□□ 1.19
SGCA-204ENST00000504073 ROCK1Q13464 1354 aa22.47■■□□□ 1.19
SGCA-204ENST00000504073 ABCC1P33527 1531 aa22.47■■□□□ 1.19
SGCA-204ENST00000504073 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
SGCA-204ENST00000504073 CROCC2H7BZ55 1655 aa22.46■■□□□ 1.19
SGCA-204ENST00000504073 HNRNPMP52272 730 aaKnown RBP eCLIP22.45■■□□□ 1.18
SGCA-204ENST00000504073 ANKRD30AQ9BXX3 1397 aa22.44■■□□□ 1.18
SGCA-204ENST00000504073 SETD5Q9C0A6 1442 aa22.44■■□□□ 1.18
SGCA-204ENST00000504073 ADGBQ8N7X0 1667 aa22.43■■□□□ 1.18
SGCA-204ENST00000504073 MBD5Q9P267 1494 aa22.42■■□□□ 1.18
SGCA-204ENST00000504073 HFM1A2PYH4 1435 aa22.41■■□□□ 1.18
SGCA-204ENST00000504073 C9orf84Q5VXU9 1444 aa22.41■■□□□ 1.18
SGCA-204ENST00000504073 CHIC2Q9UKJ5 165 aa22.41■■□□□ 1.18
SGCA-204ENST00000504073 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
SGCA-204ENST00000504073 HRCP23327 699 aa22.39■■□□□ 1.17
SGCA-204ENST00000504073 ADGRL2O95490 1459 aa22.39■■□□□ 1.17
SGCA-204ENST00000504073 PTPRKQ15262 1439 aa22.39■■□□□ 1.17
SGCA-204ENST00000504073 MAST1Q9Y2H9 1570 aa22.38■■□□□ 1.17
SGCA-204ENST00000504073 GCC2Q8IWJ2 1684 aa22.36■■□□□ 1.17
SGCA-204ENST00000504073 ZNF518AQ6AHZ1 1483 aa22.35■■□□□ 1.17
SGCA-204ENST00000504073 SPAG9O60271 1321 aaKnown RBP22.34■■□□□ 1.17
SGCA-204ENST00000504073 RRP7BPQ9NSQ0 103 aa22.34■■□□□ 1.17
SGCA-204ENST00000504073 RTEL1-TNFRSF6BF6WH68 1400 aa22.33■■□□□ 1.17
SGCA-204ENST00000504073 NCOA1Q15788 1441 aa22.33■■□□□ 1.17
SGCA-204ENST00000504073 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
SGCA-204ENST00000504073 RAB3GAP2Q9H2M9 1393 aa22.33■■□□□ 1.17
SGCA-204ENST00000504073 DENND4BO75064 1496 aaPredicted RBP22.33■■□□□ 1.16
SGCA-204ENST00000504073 NAIPQ13075 1403 aa22.32■■□□□ 1.16
SGCA-204ENST00000504073 ARHGEF12Q9NZN5 1544 aa22.32■■□□□ 1.16
SGCA-204ENST00000504073 TRAPPC8Q9Y2L5 1435 aa22.31■■□□□ 1.16
SGCA-204ENST00000504073 LMTK3Q96Q04 1460 aa22.29■■□□□ 1.16
SGCA-204ENST00000504073 POGZQ7Z3K3 1410 aa22.29■■□□□ 1.16
SGCA-204ENST00000504073 PLXNC1O60486 1568 aa22.29■■□□□ 1.16
SGCA-204ENST00000504073 CCER1Q8TC90 406 aaPredicted RBP22.28■■□□□ 1.16
SGCA-204ENST00000504073 KIF15Q9NS87 1388 aa22.27■■□□□ 1.16
SGCA-204ENST00000504073 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
SGCA-204ENST00000504073 ATP7AQ04656 1500 aa22.25■■□□□ 1.15
SGCA-204ENST00000504073 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
SGCA-204ENST00000504073 DUOX2Q9NRD8 1548 aa22.23■■□□□ 1.15
SGCA-204ENST00000504073 KDM5CP41229 1560 aa22.23■■□□□ 1.15
SGCA-204ENST00000504073 ZFYVE16Q7Z3T8 1539 aa22.22■■□□□ 1.15
SGCA-204ENST00000504073 INO80Q9ULG1 1556 aaPredicted RBP22.22■■□□□ 1.15
SGCA-204ENST00000504073 MLH3Q9UHC1 1453 aa22.22■■□□□ 1.15
SGCA-204ENST00000504073 ERBINQ96RT1 1412 aa22.19■■□□□ 1.14
SGCA-204ENST00000504073 PTPRMP28827 1452 aa22.19■■□□□ 1.14
SGCA-204ENST00000504073 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
SGCA-204ENST00000504073 RICTORQ6R327 1708 aa22.17■■□□□ 1.14
SGCA-204ENST00000504073 CLSPNQ9HAW4 1339 aa22.17■■□□□ 1.14
SGCA-204ENST00000504073 ZEB1P37275 1124 aaPredicted RBP22.17■■□□□ 1.14
SGCA-204ENST00000504073 MAGI2Q86UL8 1455 aa22.16■■□□□ 1.14
SGCA-204ENST00000504073 RAPGEF3O95398 923 aa22.15■■□□□ 1.14
SGCA-204ENST00000504073 ZMYM4Q5VZL5 1548 aa22.15■■□□□ 1.14
SGCA-204ENST00000504073 ADAMTSL3P82987 1691 aa22.14■■□□□ 1.13
SGCA-204ENST00000504073 KIDINS220Q9ULH0 1771 aa22.13■■□□□ 1.13
SGCA-204ENST00000504073 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
SGCA-204ENST00000504073 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
SGCA-204ENST00000504073 ILDR2Q71H61 639 aa22.1■■□□□ 1.13
SGCA-204ENST00000504073 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms