RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ZFYVE16Q7Z3T8 1539 aa35.61■■■■□ 3.29
LSM6-203ENST00000503982 FYCO1Q9BQS8 1478 aa35.6■■■■□ 3.29
LSM6-203ENST00000503982 ADAMTSL3P82987 1691 aa35.59■■■■□ 3.29
LSM6-203ENST00000503982 ZMYM4Q5VZL5 1548 aa35.59■■■■□ 3.29
LSM6-203ENST00000503982 HECW2Q9P2P5 1572 aa35.59■■■■□ 3.29
LSM6-203ENST00000503982 POGZQ7Z3K3 1410 aa35.57■■■■□ 3.28
LSM6-203ENST00000503982 MYT1LQ9UL68 1186 aa35.53■■■■□ 3.28
LSM6-203ENST00000503982 MADDQ8WXG6 1647 aa35.53■■■■□ 3.28
LSM6-203ENST00000503982 CDC42BPBQ9Y5S2 1711 aa35.52■■■■□ 3.28
LSM6-203ENST00000503982 YEATS2Q9ULM3 1422 aa35.52■■■■□ 3.28
LSM6-203ENST00000503982 MAGI2Q86UL8 1455 aa35.52■■■■□ 3.28
LSM6-203ENST00000503982 PTPRMP28827 1452 aa35.49■■■■□ 3.27
LSM6-203ENST00000503982 PREX2Q70Z35 1606 aa35.47■■■■□ 3.27
LSM6-203ENST00000503982 RIMS1Q86UR5 1692 aaKnown RBP35.46■■■■□ 3.27
LSM6-203ENST00000503982 ZNF518AQ6AHZ1 1483 aa35.43■■■■□ 3.26
LSM6-203ENST00000503982 MLECQ14165 292 aa35.43■■■■□ 3.26
LSM6-203ENST00000503982 CDC42BPAQ5VT25 1732 aa35.42■■■■□ 3.26
LSM6-203ENST00000503982 PLPPR3Q6T4P5 718 aa35.41■■■■□ 3.26
LSM6-203ENST00000503982 SIGLEC1Q9BZZ2 1709 aa35.4■■■■□ 3.26
LSM6-203ENST00000503982 AFAP1Q8N556 730 aa35.38■■■■□ 3.25
LSM6-203ENST00000503982 CEP162Q5TB80 1403 aa35.38■■■■□ 3.25
LSM6-203ENST00000503982 ATP10AO60312 1499 aa35.36■■■■□ 3.25
LSM6-203ENST00000503982 C9orf84Q5VXU9 1444 aa35.35■■■■□ 3.25
LSM6-203ENST00000503982 ZNF777Q9ULD5 760 aaPredicted RBP35.35■■■■□ 3.25
LSM6-203ENST00000503982 ITSN2Q9NZM3 1697 aa35.34■■■■□ 3.25
LSM6-203ENST00000503982 FER1L4A9Z1Z3 1794 aa35.33■■■■□ 3.25
LSM6-203ENST00000503982 ABCC1P33527 1531 aa35.32■■■■□ 3.25
LSM6-203ENST00000503982 MTUS2Q5JR59 1369 aa35.32■■■■□ 3.24
LSM6-203ENST00000503982 KDM5CP41229 1560 aa35.32■■■■□ 3.24
LSM6-203ENST00000503982 TRAPPC8Q9Y2L5 1435 aa35.24■■■■□ 3.23
LSM6-203ENST00000503982 ARHGEF12Q9NZN5 1544 aa35.24■■■■□ 3.23
LSM6-203ENST00000503982 CCNB3Q8WWL7 1395 aa35.24■■■■□ 3.23
LSM6-203ENST00000503982 DIP2CQ9Y2E4 1556 aa35.22■■■■□ 3.23
LSM6-203ENST00000503982 GPATCH8Q9UKJ3 1502 aaKnown RBP35.21■■■■□ 3.23
LSM6-203ENST00000503982 ABCA6Q8N139 1617 aa35.21■■■■□ 3.23
LSM6-203ENST00000503982 SAMD9LQ8IVG5 1584 aa35.2■■■■□ 3.23
LSM6-203ENST00000503982 LOC105371045A0A1W2PR82 267 aa35.19■■■■□ 3.22
LSM6-203ENST00000503982 CFDP1Q9UEE9 299 aaPredicted RBP35.19■■■■□ 3.22
LSM6-203ENST00000503982 MLH3Q9UHC1 1453 aa35.18■■■■□ 3.22
LSM6-203ENST00000503982 EHBP1L1Q8N3D4 1523 aa35.17■■■■□ 3.22
LSM6-203ENST00000503982 SYCP2Q9BX26 1530 aa35.17■■■■□ 3.22
LSM6-203ENST00000503982 HNRNPMP52272 730 aaKnown RBP eCLIP35.13■■■■□ 3.21
LSM6-203ENST00000503982 KIDINS220Q9ULH0 1771 aa35.13■■■■□ 3.21
LSM6-203ENST00000503982 REREQ9P2R6 1566 aa35.09■■■■□ 3.21
LSM6-203ENST00000503982 PLEKHH2Q8IVE3 1493 aa35.09■■■■□ 3.21
LSM6-203ENST00000503982 LMTK3Q96Q04 1460 aa35.08■■■■□ 3.21
LSM6-203ENST00000503982 SPAG9O60271 1321 aaKnown RBP35.07■■■■□ 3.21
LSM6-203ENST00000503982 ESF1Q9H501 851 aaKnown RBP35.07■■■■□ 3.2
LSM6-203ENST00000503982 TIAM1Q13009 1591 aa35.07■■■■□ 3.2
LSM6-203ENST00000503982 SUPT6HQ7KZ85 1726 aaKnown RBP35.03■■■■□ 3.2
LSM6-203ENST00000503982 CEBPAP49715 358 aaPredicted RBP35.01■■■■□ 3.2
LSM6-203ENST00000503982 KIAA1107Q9UPP5 1409 aa35■■■■□ 3.19
LSM6-203ENST00000503982 HSPA2P54652 639 aa34.99■■■■□ 3.19
LSM6-203ENST00000503982 AGLP35573 1532 aa34.99■■■■□ 3.19
LSM6-203ENST00000503982 ATP7AQ04656 1500 aa34.98■■■■□ 3.19
LSM6-203ENST00000503982 VPS8Q8N3P4 1428 aa34.98■■■■□ 3.19
LSM6-203ENST00000503982 ILDR1Q86SU0 546 aaPredicted RBP34.95■■■■□ 3.19
LSM6-203ENST00000503982 PREX1Q8TCU6 1659 aa34.95■■■■□ 3.18
LSM6-203ENST00000503982 ZNF644Q9H582 1327 aaPredicted RBP34.94■■■■□ 3.18
LSM6-203ENST00000503982 INO80Q9ULG1 1556 aaPredicted RBP34.92■■■■□ 3.18
LSM6-203ENST00000503982 NCOA2Q15596 1464 aa34.92■■■■□ 3.18
LSM6-203ENST00000503982 C3P01024 1663 aa34.89■■■■□ 3.18
LSM6-203ENST00000503982 A2MP01023 1474 aa34.84■■■■□ 3.17
LSM6-203ENST00000503982 SETD1BQ9UPS6 1966 aaKnown RBP34.84■■■■□ 3.17
LSM6-203ENST00000503982 ADGBQ8N7X0 1667 aa34.84■■■■□ 3.17
LSM6-203ENST00000503982 UHRF1BP1Q6BDS2 1440 aa34.81■■■■□ 3.16
LSM6-203ENST00000503982 CNTLNQ9NXG0 1405 aa34.81■■■■□ 3.16
LSM6-203ENST00000503982 CAMSAP2Q08AD1 1489 aa34.81■■■■□ 3.16
LSM6-203ENST00000503982 LRRC9Q6ZRR7 1453 aa34.81■■■■□ 3.16
LSM6-203ENST00000503982 MBD5Q9P267 1494 aa34.79■■■■□ 3.16
LSM6-203ENST00000503982 GGT6Q6P531 493 aa34.77■■■■□ 3.16
LSM6-203ENST00000503982 PLXNC1O60486 1568 aa34.76■■■■□ 3.16
LSM6-203ENST00000503982 CCDC141Q6ZP82 1450 aa34.75■■■■□ 3.15
LSM6-203ENST00000503982 CLTCQ00610 1675 aaKnown RBP34.75■■■■□ 3.15
LSM6-203ENST00000503982 MROH2AA6NES4 1674 aa34.74■■■■□ 3.15
LSM6-203ENST00000503982 APLP2Q06481 763 aa34.73■■■■□ 3.15
LSM6-203ENST00000503982 RTEL1-TNFRSF6BF6WH68 1400 aa34.71■■■■□ 3.15
LSM6-203ENST00000503982 KANK4Q5T7N3 995 aaPredicted RBP34.69■■■■□ 3.14
LSM6-203ENST00000503982 RSPH4AQ5TD94 716 aa34.69■■■■□ 3.14
LSM6-203ENST00000503982 MAP3K1Q13233 1512 aa34.69■■■■□ 3.14
LSM6-203ENST00000503982 TSPY4P0CV99 314 aa34.66■■■■□ 3.14
LSM6-203ENST00000503982 TSPY10P0CW01 314 aa34.66■■■■□ 3.14
LSM6-203ENST00000503982 ZMYM3Q14202 1370 aa34.65■■■■□ 3.14
LSM6-203ENST00000503982 ARHGEF5Q12774 1597 aa34.62■■■■□ 3.13
LSM6-203ENST00000503982 DHX29Q7Z478 1369 aaKnown RBP34.62■■■■□ 3.13
LSM6-203ENST00000503982 STRCQ7RTU9 1775 aa34.59■■■■□ 3.13
LSM6-203ENST00000503982 KIF3BO15066 747 aa34.58■■■■□ 3.13
LSM6-203ENST00000503982 FBXO41Q8TF61 875 aa34.58■■■■□ 3.13
LSM6-203ENST00000503982 NPATQ14207 1427 aa34.56■■■■□ 3.12
LSM6-203ENST00000503982 MYOM3Q5VTT5 1437 aa34.56■■■■□ 3.12
LSM6-203ENST00000503982 DMRT2Q9Y5R5 561 aa34.56■■■■□ 3.12
LSM6-203ENST00000503982 PPP6R1Q9UPN7 881 aa34.55■■■■□ 3.12
LSM6-203ENST00000503982 MIA2Q96PC5 1412 aa34.51■■■■□ 3.12
LSM6-203ENST00000503982 MYO3AQ8NEV4 1616 aa34.48■■■■□ 3.11
LSM6-203ENST00000503982 PTPRKQ15262 1439 aa34.46■■■■□ 3.11
LSM6-203ENST00000503982 MAST1Q9Y2H9 1570 aa34.45■■■■□ 3.11
LSM6-203ENST00000503982 CAMSAP1Q5T5Y3 1602 aa34.44■■■■□ 3.1
LSM6-203ENST00000503982 WASHC2CQ9Y4E1 1318 aa34.43■■■■□ 3.1
LSM6-203ENST00000503982 KDM5DQ9BY66 1539 aa34.42■■■■□ 3.1
LSM6-203ENST00000503982 CERKQ8TCT0 537 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms