RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
PRDM2-213ENST00000503842 MYCNP04198 464 aaPredicted RBP20.59■□□□□ 0.89
PRDM2-213ENST00000503842 KIF14Q15058 1648 aa20.58■□□□□ 0.89
PRDM2-213ENST00000503842 U3KPZ7 1027 aaPredicted RBP20.58■□□□□ 0.89
PRDM2-213ENST00000503842 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
PRDM2-213ENST00000503842 PHLDB1Q86UU1 1377 aa20.55■□□□□ 0.88
PRDM2-213ENST00000503842 ABCC10Q5T3U5 1492 aa20.55■□□□□ 0.88
PRDM2-213ENST00000503842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRDM2-213ENST00000503842 KCNH8Q96L42 1107 aa20.5■□□□□ 0.87
PRDM2-213ENST00000503842 MYOM3Q5VTT5 1437 aa20.49■□□□□ 0.87
PRDM2-213ENST00000503842 TTC37Q6PGP7 1564 aa20.48■□□□□ 0.87
PRDM2-213ENST00000503842 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
PRDM2-213ENST00000503842 GPATCH8Q9UKJ3 1502 aaKnown RBP20.47■□□□□ 0.87
PRDM2-213ENST00000503842 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
PRDM2-213ENST00000503842 ABCA9Q8IUA7 1624 aa20.45■□□□□ 0.87
PRDM2-213ENST00000503842 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
PRDM2-213ENST00000503842 FGD6Q6ZV73 1430 aa20.44■□□□□ 0.86
PRDM2-213ENST00000503842 MIA2Q96PC5 1412 aa20.43■□□□□ 0.86
PRDM2-213ENST00000503842 GLI2P10070 1586 aa20.42■□□□□ 0.86
PRDM2-213ENST00000503842 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
PRDM2-213ENST00000503842 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
PRDM2-213ENST00000503842 PREX2Q70Z35 1606 aa20.4■□□□□ 0.86
PRDM2-213ENST00000503842 DIP2BQ9P265 1576 aa20.4■□□□□ 0.86
PRDM2-213ENST00000503842 MYO5CQ9NQX4 1742 aa20.39■□□□□ 0.86
PRDM2-213ENST00000503842 ARAP3Q8WWN8 1544 aa20.38■□□□□ 0.85
PRDM2-213ENST00000503842 PLCH2O75038 1416 aa20.38■□□□□ 0.85
PRDM2-213ENST00000503842 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
PRDM2-213ENST00000503842 CDC42BPBQ9Y5S2 1711 aa20.37■□□□□ 0.85
PRDM2-213ENST00000503842 SAMD1Q6SPF0 538 aaPredicted RBP20.37■□□□□ 0.85
PRDM2-213ENST00000503842 PTPN23Q9H3S7 1636 aa20.37■□□□□ 0.85
PRDM2-213ENST00000503842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.36■□□□□ 0.85
PRDM2-213ENST00000503842 C1QBPQ07021 282 aaKnown RBP20.36■□□□□ 0.85
PRDM2-213ENST00000503842 CFDP1Q9UEE9 299 aaPredicted RBP20.36■□□□□ 0.85
PRDM2-213ENST00000503842 CD109Q6YHK3 1445 aa20.34■□□□□ 0.85
PRDM2-213ENST00000503842 MAP3K4Q9Y6R4 1608 aa20.34■□□□□ 0.85
PRDM2-213ENST00000503842 FAM69CQ0P6D2 419 aa20.33■□□□□ 0.85
PRDM2-213ENST00000503842 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
PRDM2-213ENST00000503842 KIF13AQ9H1H9 1805 aa20.31■□□□□ 0.84
PRDM2-213ENST00000503842 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
PRDM2-213ENST00000503842 SAMD9LQ8IVG5 1584 aa20.29■□□□□ 0.84
PRDM2-213ENST00000503842 ZNF644Q9H582 1327 aaPredicted RBP20.29■□□□□ 0.84
PRDM2-213ENST00000503842 FAM50AQ14320 339 aaKnown RBP20.29■□□□□ 0.84
PRDM2-213ENST00000503842 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
PRDM2-213ENST00000503842 FANCAO15360 1455 aa20.26■□□□□ 0.83
PRDM2-213ENST00000503842 ZNF777Q9ULD5 760 aaPredicted RBP20.26■□□□□ 0.83
PRDM2-213ENST00000503842 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
PRDM2-213ENST00000503842 KIAA1107Q9UPP5 1409 aa20.24■□□□□ 0.83
PRDM2-213ENST00000503842 ABCC1P33527 1531 aa20.23■□□□□ 0.83
PRDM2-213ENST00000503842 CFAP74Q9C0B2 1584 aa20.23■□□□□ 0.83
PRDM2-213ENST00000503842 PPRC1Q5VV67 1664 aaKnown RBP20.22■□□□□ 0.83
PRDM2-213ENST00000503842 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
PRDM2-213ENST00000503842 NEO1Q92859 1461 aa20.22■□□□□ 0.83
PRDM2-213ENST00000503842 MBD5Q9P267 1494 aa20.22■□□□□ 0.83
PRDM2-213ENST00000503842 ARHGEF5Q12774 1597 aa20.21■□□□□ 0.83
PRDM2-213ENST00000503842 DNMT1P26358 1616 aaKnown RBP20.2■□□□□ 0.82
PRDM2-213ENST00000503842 AKNAQ7Z591 1439 aa20.2■□□□□ 0.82
PRDM2-213ENST00000503842 SYCP2Q9BX26 1530 aa20.2■□□□□ 0.82
PRDM2-213ENST00000503842 ARHGEF12Q9NZN5 1544 aa20.2■□□□□ 0.82
PRDM2-213ENST00000503842 ABCC5O15440 1437 aa20.19■□□□□ 0.82
PRDM2-213ENST00000503842 DAPK1P53355 1430 aa20.19■□□□□ 0.82
PRDM2-213ENST00000503842 PTPRKQ15262 1439 aa20.19■□□□□ 0.82
PRDM2-213ENST00000503842 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
PRDM2-213ENST00000503842 TSPOAP1O95153 1857 aa20.18■□□□□ 0.82
PRDM2-213ENST00000503842 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
PRDM2-213ENST00000503842 HNRNPMP52272 730 aaKnown RBP eCLIP20.17■□□□□ 0.82
PRDM2-213ENST00000503842 CCDC141Q6ZP82 1450 aa20.16■□□□□ 0.82
PRDM2-213ENST00000503842 ITGAEP38570 1179 aa20.15■□□□□ 0.82
PRDM2-213ENST00000503842 RSPH4AQ5TD94 716 aa20.15■□□□□ 0.82
PRDM2-213ENST00000503842 CROCC2H7BZ55 1655 aa20.14■□□□□ 0.81
PRDM2-213ENST00000503842 SHANK2Q9UPX8 1470 aa20.14■□□□□ 0.81
PRDM2-213ENST00000503842 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
PRDM2-213ENST00000503842 CACNB1Q02641 598 aaPredicted RBP20.14■□□□□ 0.81
PRDM2-213ENST00000503842 TRAPPC8Q9Y2L5 1435 aa20.13■□□□□ 0.81
PRDM2-213ENST00000503842 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
PRDM2-213ENST00000503842 ATXN8OSP0DMR3 200 aa20.11■□□□□ 0.81
PRDM2-213ENST00000503842 POGZQ7Z3K3 1410 aa20.1■□□□□ 0.81
PRDM2-213ENST00000503842 C9orf84Q5VXU9 1444 aa20.09■□□□□ 0.81
PRDM2-213ENST00000503842 MAST1Q9Y2H9 1570 aa20.08■□□□□ 0.81
PRDM2-213ENST00000503842 DENND4BO75064 1496 aaPredicted RBP20.08■□□□□ 0.81
PRDM2-213ENST00000503842 ADGRL2O95490 1459 aa20.08■□□□□ 0.81
PRDM2-213ENST00000503842 ROCK1Q13464 1354 aa20.08■□□□□ 0.8
PRDM2-213ENST00000503842 CAPN15O75808 1086 aa20.07■□□□□ 0.8
PRDM2-213ENST00000503842 ZNF518AQ6AHZ1 1483 aa20.06■□□□□ 0.8
PRDM2-213ENST00000503842 TSPY4P0CV99 314 aa20.06■□□□□ 0.8
PRDM2-213ENST00000503842 TSPY10P0CW01 314 aa20.06■□□□□ 0.8
PRDM2-213ENST00000503842 AFAP1Q8N556 730 aa20.06■□□□□ 0.8
PRDM2-213ENST00000503842 KDM5CP41229 1560 aa20.05■□□□□ 0.8
PRDM2-213ENST00000503842 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
PRDM2-213ENST00000503842 ADGBQ8N7X0 1667 aa20.05■□□□□ 0.8
PRDM2-213ENST00000503842 HFM1A2PYH4 1435 aa20.03■□□□□ 0.8
PRDM2-213ENST00000503842 NCOA1Q15788 1441 aa20.03■□□□□ 0.8
PRDM2-213ENST00000503842 RICTORQ6R327 1708 aa20.03■□□□□ 0.8
PRDM2-213ENST00000503842 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
PRDM2-213ENST00000503842 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
PRDM2-213ENST00000503842 FRMPD1Q5SYB0 1578 aa20.02■□□□□ 0.8
PRDM2-213ENST00000503842 ZFYVE16Q7Z3T8 1539 aa20.02■□□□□ 0.79
PRDM2-213ENST00000503842 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.79
PRDM2-213ENST00000503842 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
PRDM2-213ENST00000503842 COL17A1Q9UMD9 1497 aaPredicted RBP20.01■□□□□ 0.79
PRDM2-213ENST00000503842 ANKRD30AQ9BXX3 1397 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms