RNA–Protein interactions for RNA: ENST00000503585.5

PACRGL-208, Transcript of parkin coregulated like, human

APPRIS P1 TSL 2 BASIC

Gene PACRGL, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-208	ENST00000503585	MTUS2	Q5JR59	1369 aa		33.66	■■■□□ 2.98
PACRGL-208	ENST00000503585	EHBP1L1	Q8N3D4	1523 aa		33.66	■■■□□ 2.98
PACRGL-208	ENST00000503585	EFCAB2	Q5VUJ9	269 aa		33.64	■■■□□ 2.98
PACRGL-208	ENST00000503585	SCAPER	Q9BY12	1400 aa		33.63	■■■□□ 2.97
PACRGL-208	ENST00000503585	TIAM1	Q13009	1591 aa		33.62	■■■□□ 2.97
PACRGL-208	ENST00000503585	ZMYM4	Q5VZL5	1548 aa		33.62	■■■□□ 2.97
PACRGL-208	ENST00000503585	POGZ	Q7Z3K3	1410 aa		33.61	■■■□□ 2.97
PACRGL-208	ENST00000503585	KDM4F	A0A1W2PPD8	638 aa		33.6	■■■□□ 2.97
PACRGL-208	ENST00000503585	ARHGEF40	Q8TER5	1519 aa		33.59	■■■□□ 2.97
PACRGL-208	ENST00000503585	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.59	■■■□□ 2.97
PACRGL-208	ENST00000503585	ABCC1	P33527	1531 aa		33.55	■■■□□ 2.96
PACRGL-208	ENST00000503585	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.55	■■■□□ 2.96
PACRGL-208	ENST00000503585	ITSN2	Q9NZM3	1697 aa		33.53	■■■□□ 2.96
PACRGL-208	ENST00000503585	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.5	■■■□□ 2.95
PACRGL-208	ENST00000503585	SAMD9L	Q8IVG5	1584 aa		33.5	■■■□□ 2.95
PACRGL-208	ENST00000503585	ZFYVE16	Q7Z3T8	1539 aa		33.5	■■■□□ 2.95
PACRGL-208	ENST00000503585	ZNF518A	Q6AHZ1	1483 aa		33.48	■■■□□ 2.95
PACRGL-208	ENST00000503585	KDM5C	P41229	1560 aa		33.48	■■■□□ 2.95
PACRGL-208	ENST00000503585	CCNB3	Q8WWL7	1395 aa		33.48	■■■□□ 2.95
PACRGL-208	ENST00000503585	ARHGEF12	Q9NZN5	1544 aa		33.48	■■■□□ 2.95
PACRGL-208	ENST00000503585	YEATS2	Q9ULM3	1422 aa		33.47	■■■□□ 2.95
PACRGL-208	ENST00000503585	MAGI2	Q86UL8	1455 aa		33.46	■■■□□ 2.95
PACRGL-208	ENST00000503585	MAP3K1	Q13233	1512 aa		33.45	■■■□□ 2.95
PACRGL-208	ENST00000503585	LRRC9	Q6ZRR7	1453 aa		33.44	■■■□□ 2.94
PACRGL-208	ENST00000503585	NCOA2	Q15596	1464 aa		33.42	■■■□□ 2.94
PACRGL-208	ENST00000503585	SIGLEC1	Q9BZZ2	1709 aa		33.41	■■■□□ 2.94
PACRGL-208	ENST00000503585	SYCP2	Q9BX26	1530 aa		33.41	■■■□□ 2.94
PACRGL-208	ENST00000503585	HECW2	Q9P2P5	1572 aa		33.4	■■■□□ 2.94
PACRGL-208	ENST00000503585	TRAPPC8	Q9Y2L5	1435 aa		33.4	■■■□□ 2.94
PACRGL-208	ENST00000503585	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.39	■■■□□ 2.94
PACRGL-208	ENST00000503585	AFAP1	Q8N556	730 aa		33.38	■■■□□ 2.93
PACRGL-208	ENST00000503585	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.37	■■■□□ 2.93
PACRGL-208	ENST00000503585	BCORL1	Q5H9F3	1711 aa		33.36	■■■□□ 2.93
PACRGL-208	ENST00000503585	ADAMTSL3	P82987	1691 aa		33.32	■■■□□ 2.93
PACRGL-208	ENST00000503585	KANK4	Q5T7N3	995 aa	Predicted RBP	33.32	■■■□□ 2.92
PACRGL-208	ENST00000503585	ABCA6	Q8N139	1617 aa		33.31	■■■□□ 2.92
PACRGL-208	ENST00000503585	PLEKHH2	Q8IVE3	1493 aa		33.31	■■■□□ 2.92
PACRGL-208	ENST00000503585	DIP2C	Q9Y2E4	1556 aa		33.3	■■■□□ 2.92
PACRGL-208	ENST00000503585	MLH3	Q9UHC1	1453 aa		33.29	■■■□□ 2.92
PACRGL-208	ENST00000503585	KIDINS220	Q9ULH0	1771 aa		33.29	■■■□□ 2.92
PACRGL-208	ENST00000503585	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.29	■■■□□ 2.92
PACRGL-208	ENST00000503585	KIAA1107	Q9UPP5	1409 aa		33.28	■■■□□ 2.92
PACRGL-208	ENST00000503585	ATP10A	O60312	1499 aa		33.28	■■■□□ 2.92
PACRGL-208	ENST00000503585	C9orf84	Q5VXU9	1444 aa		33.26	■■■□□ 2.91
PACRGL-208	ENST00000503585	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.26	■■■□□ 2.91
PACRGL-208	ENST00000503585	ZNF644	Q9H582	1327 aa	Predicted RBP	33.25	■■■□□ 2.91
PACRGL-208	ENST00000503585	MADD	Q8WXG6	1647 aa		33.24	■■■□□ 2.91
PACRGL-208	ENST00000503585	MYT1L	Q9UL68	1186 aa		33.22	■■■□□ 2.91
PACRGL-208	ENST00000503585	CAMSAP2	Q08AD1	1489 aa		33.21	■■■□□ 2.91
PACRGL-208	ENST00000503585	APLP2	Q06481	763 aa		33.21	■■■□□ 2.91
PACRGL-208	ENST00000503585	INO80	Q9ULG1	1556 aa	Predicted RBP	33.2	■■■□□ 2.91
PACRGL-208	ENST00000503585	RERE	Q9P2R6	1566 aa		33.19	■■■□□ 2.9
PACRGL-208	ENST00000503585	MBD5	Q9P267	1494 aa		33.18	■■■□□ 2.9
PACRGL-208	ENST00000503585	ATP7A	Q04656	1500 aa		33.16	■■■□□ 2.9
PACRGL-208	ENST00000503585	RIMS1	Q86UR5	1692 aa	Known RBP	33.15	■■■□□ 2.9
PACRGL-208	ENST00000503585	SPAG9	O60271	1321 aa	Known RBP	33.14	■■■□□ 2.9
PACRGL-208	ENST00000503585	MYOM3	Q5VTT5	1437 aa		33.12	■■■□□ 2.89
PACRGL-208	ENST00000503585	FER1L4	A9Z1Z3	1794 aa		33.12	■■■□□ 2.89
PACRGL-208	ENST00000503585	PTPRM	P28827	1452 aa		33.11	■■■□□ 2.89
PACRGL-208	ENST00000503585	CCDC141	Q6ZP82	1450 aa		33.08	■■■□□ 2.89
PACRGL-208	ENST00000503585	MLEC	Q14165	292 aa		33.08	■■■□□ 2.89
PACRGL-208	ENST00000503585	ARHGEF5	Q12774	1597 aa		33.06	■■■□□ 2.88
PACRGL-208	ENST00000503585	AGL	P35573	1532 aa		33.06	■■■□□ 2.88
PACRGL-208	ENST00000503585	MIA2	Q96PC5	1412 aa		33.05	■■■□□ 2.88
PACRGL-208	ENST00000503585	ADGB	Q8N7X0	1667 aa		33.02	■■■□□ 2.88
PACRGL-208	ENST00000503585	PLXNC1	O60486	1568 aa		33.01	■■■□□ 2.87
PACRGL-208	ENST00000503585	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.98	■■■□□ 2.87
PACRGL-208	ENST00000503585	PTPN23	Q9H3S7	1636 aa		32.97	■■■□□ 2.87
PACRGL-208	ENST00000503585	A2M	P01023	1474 aa		32.96	■■■□□ 2.87
PACRGL-208	ENST00000503585	RSPH4A	Q5TD94	716 aa		32.92	■■■□□ 2.86
PACRGL-208	ENST00000503585	FGD6	Q6ZV73	1430 aa		32.92	■■■□□ 2.86
PACRGL-208	ENST00000503585	MAST1	Q9Y2H9	1570 aa		32.9	■■■□□ 2.86
PACRGL-208	ENST00000503585	CROCC2	H7BZ55	1655 aa		32.88	■■■□□ 2.85
PACRGL-208	ENST00000503585	TCOF1	Q13428	1488 aa	Known RBP	32.86	■■■□□ 2.85
PACRGL-208	ENST00000503585	PLPPR3	Q6T4P5	718 aa		32.83	■■■□□ 2.85
PACRGL-208	ENST00000503585	TSPY4	P0CV99	314 aa		32.83	■■■□□ 2.85
PACRGL-208	ENST00000503585	TSPY10	P0CW01	314 aa		32.83	■■■□□ 2.85
PACRGL-208	ENST00000503585	DNMT1	P26358	1616 aa	Known RBP	32.82	■■■□□ 2.84
PACRGL-208	ENST00000503585	DHX29	Q7Z478	1369 aa	Known RBP	32.8	■■■□□ 2.84
PACRGL-208	ENST00000503585	C3	P01024	1663 aa		32.8	■■■□□ 2.84
PACRGL-208	ENST00000503585	ABCC5	O15440	1437 aa		32.77	■■■□□ 2.84
PACRGL-208	ENST00000503585	SHANK2	Q9UPX8	1470 aa		32.76	■■■□□ 2.84
PACRGL-208	ENST00000503585	MROH2A	A6NES4	1674 aa		32.75	■■■□□ 2.83
PACRGL-208	ENST00000503585	CLTC	Q00610	1675 aa	Known RBP	32.75	■■■□□ 2.83
PACRGL-208	ENST00000503585	DAPK1	P53355	1430 aa		32.75	■■■□□ 2.83
PACRGL-208	ENST00000503585	CNTLN	Q9NXG0	1405 aa		32.73	■■■□□ 2.83
PACRGL-208	ENST00000503585	CEBPA	P49715	358 aa	Predicted RBP	32.73	■■■□□ 2.83
PACRGL-208	ENST00000503585	ESF1	Q9H501	851 aa	Known RBP	32.72	■■■□□ 2.83
PACRGL-208	ENST00000503585	LMTK3	Q96Q04	1460 aa		32.72	■■■□□ 2.83
PACRGL-208	ENST00000503585	GGT6	Q6P531	493 aa		32.7	■■■□□ 2.82
PACRGL-208	ENST00000503585	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.7	■■■□□ 2.82
PACRGL-208	ENST00000503585	PREX1	Q8TCU6	1659 aa		32.68	■■■□□ 2.82
PACRGL-208	ENST00000503585	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.66	■■■□□ 2.82
PACRGL-208	ENST00000503585	KIF3B	O15066	747 aa		32.65	■■■□□ 2.82
PACRGL-208	ENST00000503585	DUOX2	Q9NRD8	1548 aa		32.63	■■■□□ 2.81
PACRGL-208	ENST00000503585	RNF17	Q9BXT8	1623 aa	Known RBP	32.63	■■■□□ 2.81
PACRGL-208	ENST00000503585	FAM50A	Q14320	339 aa	Known RBP	32.62	■■■□□ 2.81
PACRGL-208	ENST00000503585	SETD1B	Q9UPS6	1966 aa	Known RBP	32.62	■■■□□ 2.81
PACRGL-208	ENST00000503585	KIF15	Q9NS87	1388 aa		32.6	■■■□□ 2.81
PACRGL-208	ENST00000503585	ZMYM3	Q14202	1370 aa		32.58	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms