RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
SCLT1-206ENST00000503565 TPRNQ4KMQ1 711 aa10.5□□□□□ -0.73
SCLT1-206ENST00000503565 SCUBE2Q9NQ36 999 aa10.49□□□□□ -0.73
SCLT1-206ENST00000503565 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.46□□□□□ -0.73
SCLT1-206ENST00000503565 SLAIN1Q8ND83 568 aa10.45□□□□□ -0.74
SCLT1-206ENST00000503565 C3orf67Q6ZVT6 689 aa10.44□□□□□ -0.74
SCLT1-206ENST00000503565 RYDENQ9NUL5 291 aaKnown RBP10.43□□□□□ -0.74
SCLT1-206ENST00000503565 G3V3G9 751 aa10.42□□□□□ -0.74
SCLT1-206ENST00000503565 KIF3CO14782 793 aa10.4□□□□□ -0.74
SCLT1-206ENST00000503565 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
SCLT1-206ENST00000503565 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
SCLT1-206ENST00000503565 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
SCLT1-206ENST00000503565 NCKAP5LQ9HCH0 1330 aa10.34□□□□□ -0.75
SCLT1-206ENST00000503565 CRISPLD2Q9H0B8 497 aa10.33□□□□□ -0.76
SCLT1-206ENST00000503565 HOXB3P14651 431 aaPredicted RBP10.32□□□□□ -0.76
SCLT1-206ENST00000503565 GPHNQ9NQX3 736 aaPredicted RBP10.3□□□□□ -0.76
SCLT1-206ENST00000503565 DSG2Q14126 1118 aa10.27□□□□□ -0.77
SCLT1-206ENST00000503565 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
SCLT1-206ENST00000503565 FAM163AQ96GL9 167 aaPredicted RBP10.26□□□□□ -0.77
SCLT1-206ENST00000503565 FOXK1P85037 733 aa10.25□□□□□ -0.77
SCLT1-206ENST00000503565 NBR1Q14596 966 aa10.25□□□□□ -0.77
SCLT1-206ENST00000503565 ST18O60284 1047 aa10.24□□□□□ -0.77
SCLT1-206ENST00000503565 MFSD10Q14728 455 aa10.23□□□□□ -0.77
SCLT1-206ENST00000503565 PDE4AP27815 886 aa10.22□□□□□ -0.77
SCLT1-206ENST00000503565 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
SCLT1-206ENST00000503565 LARP6Q9BRS8 491 aaKnown RBP10.22□□□□□ -0.77
SCLT1-206ENST00000503565 SNPHO15079 494 aa10.2□□□□□ -0.78
SCLT1-206ENST00000503565 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
SCLT1-206ENST00000503565 SLC34A2O95436 690 aa10.17□□□□□ -0.78
SCLT1-206ENST00000503565 DOK7Q18PE1 504 aa10.17□□□□□ -0.78
SCLT1-206ENST00000503565 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
SCLT1-206ENST00000503565 KHSRPQ92945 711 aaKnown RBP eCLIP10.16□□□□□ -0.78
SCLT1-206ENST00000503565 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
SCLT1-206ENST00000503565 HOXB1P14653 301 aaPredicted RBP10.13□□□□□ -0.79
SCLT1-206ENST00000503565 ARSIQ5FYB1 569 aa10.13□□□□□ -0.79
SCLT1-206ENST00000503565 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
SCLT1-206ENST00000503565 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
SCLT1-206ENST00000503565 PTCD2Q8WV60 388 aaKnown RBP10.12□□□□□ -0.79
SCLT1-206ENST00000503565 MARVELD3Q96A59 401 aa10.12□□□□□ -0.79
SCLT1-206ENST00000503565 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
SCLT1-206ENST00000503565 ZSWIM6Q9HCJ5 1215 aa10.11□□□□□ -0.79
SCLT1-206ENST00000503565 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
SCLT1-206ENST00000503565 POTEB3A0JP26 581 aa10.1□□□□□ -0.79
SCLT1-206ENST00000503565 POTEBQ6S5H4 581 aa10.1□□□□□ -0.79
SCLT1-206ENST00000503565 ZNF710Q8N1W2 664 aa10.1□□□□□ -0.79
SCLT1-206ENST00000503565 OXER1Q8TDS5 423 aa10.1□□□□□ -0.79
SCLT1-206ENST00000503565 POTEMA6NI47 508 aa10.08□□□□□ -0.8
SCLT1-206ENST00000503565 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
SCLT1-206ENST00000503565 UPF1Q92900 1129 aaKnown RBP eCLIP10.07□□□□□ -0.8
SCLT1-206ENST00000503565 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
SCLT1-206ENST00000503565 NUDT7P0C024 238 aa10.05□□□□□ -0.8
SCLT1-206ENST00000503565 EMP3P54852 163 aa10.03□□□□□ -0.8
SCLT1-206ENST00000503565 FAM205CA6NFA0 338 aa10□□□□□ -0.81
SCLT1-206ENST00000503565 E2F4Q16254 413 aa10□□□□□ -0.81
SCLT1-206ENST00000503565 LHX6Q9UPM6 363 aa10□□□□□ -0.81
SCLT1-206ENST00000503565 HS3ST6Q96QI5 342 aa9.99□□□□□ -0.81
SCLT1-206ENST00000503565 ANO8Q9HCE9 1232 aaPredicted RBP9.99□□□□□ -0.81
SCLT1-206ENST00000503565 WDR70Q9NW82 654 aa9.99□□□□□ -0.81
SCLT1-206ENST00000503565 ZNF316A6NFI3 1004 aaPredicted RBP9.98□□□□□ -0.81
SCLT1-206ENST00000503565 DPYSL4O14531 572 aa9.98□□□□□ -0.81
SCLT1-206ENST00000503565 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
SCLT1-206ENST00000503565 TBC1D12O60347 775 aa9.96□□□□□ -0.82
SCLT1-206ENST00000503565 EVI5O60447 810 aa9.96□□□□□ -0.82
SCLT1-206ENST00000503565 MAP3K9P80192 1104 aa9.96□□□□□ -0.82
SCLT1-206ENST00000503565 KCNV2Q8TDN2 545 aa9.96□□□□□ -0.82
SCLT1-206ENST00000503565 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
SCLT1-206ENST00000503565 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
SCLT1-206ENST00000503565 ERBB3P21860 1342 aa9.95□□□□□ -0.82
SCLT1-206ENST00000503565 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
SCLT1-206ENST00000503565 POTEEQ6S8J3 1075 aa9.92□□□□□ -0.82
SCLT1-206ENST00000503565 CDAN1Q8IWY9 1227 aa9.92□□□□□ -0.82
SCLT1-206ENST00000503565 P3H3Q8IVL6 736 aa9.91□□□□□ -0.82
SCLT1-206ENST00000503565 PDIA6Q15084 440 aa9.9□□□□□ -0.82
SCLT1-206ENST00000503565 GTF3C3Q9Y5Q9 886 aa9.9□□□□□ -0.82
SCLT1-206ENST00000503565 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
SCLT1-206ENST00000503565 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
SCLT1-206ENST00000503565 ZNF687Q8N1G0 1237 aa9.88□□□□□ -0.83
SCLT1-206ENST00000503565 FOSBP53539 338 aa9.87□□□□□ -0.83
SCLT1-206ENST00000503565 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
SCLT1-206ENST00000503565 PTGER2P43116 358 aa9.86□□□□□ -0.83
SCLT1-206ENST00000503565 PCDHGA10Q9Y5H3 936 aa9.85□□□□□ -0.83
SCLT1-206ENST00000503565 SPDYE16A6NNV3 312 aaPredicted RBP9.84□□□□□ -0.83
SCLT1-206ENST00000503565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.84□□□□□ -0.83
SCLT1-206ENST00000503565 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
SCLT1-206ENST00000503565 TMEM132AQ24JP5 1023 aa9.83□□□□□ -0.84
SCLT1-206ENST00000503565 LMOD2Q6P5Q4 547 aa9.83□□□□□ -0.84
SCLT1-206ENST00000503565 ZNF454Q8N9F8 522 aa9.83□□□□□ -0.84
SCLT1-206ENST00000503565 JPH4Q96JJ6 628 aa9.83□□□□□ -0.84
SCLT1-206ENST00000503565 DDX12PQ92771 950 aa9.82□□□□□ -0.84
SCLT1-206ENST00000503565 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
SCLT1-206ENST00000503565 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
SCLT1-206ENST00000503565 PCDH10Q9P2E7 1040 aa9.81□□□□□ -0.84
SCLT1-206ENST00000503565 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
SCLT1-206ENST00000503565 ADAM33Q9BZ11 813 aa9.8□□□□□ -0.84
SCLT1-206ENST00000503565 PHF14O94880 888 aa9.79□□□□□ -0.84
SCLT1-206ENST00000503565 MLLT3P42568 568 aaPredicted RBP9.79□□□□□ -0.84
SCLT1-206ENST00000503565 PSEN2P49810 448 aa9.78□□□□□ -0.84
SCLT1-206ENST00000503565 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
SCLT1-206ENST00000503565 SEMA3EO15041 775 aa9.77□□□□□ -0.85
SCLT1-206ENST00000503565 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms