RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.54□□□□□ -0.72
TOPBP1-203ENST00000503464 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
TOPBP1-203ENST00000503464 MIA2Q96PC5 1412 aa10.53□□□□□ -0.72
TOPBP1-203ENST00000503464 MYO5CQ9NQX4 1742 aa10.53□□□□□ -0.72
TOPBP1-203ENST00000503464 PLEKHD1A6NEE1 506 aa10.52□□□□□ -0.73
TOPBP1-203ENST00000503464 PTPRKQ15262 1439 aa10.51□□□□□ -0.73
TOPBP1-203ENST00000503464 WDR7Q9Y4E6 1490 aa10.51□□□□□ -0.73
TOPBP1-203ENST00000503464 DNMT1P26358 1616 aaKnown RBP10.51□□□□□ -0.73
TOPBP1-203ENST00000503464 CROCC2H7BZ55 1655 aa10.5□□□□□ -0.73
TOPBP1-203ENST00000503464 CAMSAP2Q08AD1 1489 aa10.5□□□□□ -0.73
TOPBP1-203ENST00000503464 SAMD9LQ8IVG5 1584 aa10.49□□□□□ -0.73
TOPBP1-203ENST00000503464 ABCA9Q8IUA7 1624 aa10.49□□□□□ -0.73
TOPBP1-203ENST00000503464 ASXL2Q76L83 1435 aa10.49□□□□□ -0.73
TOPBP1-203ENST00000503464 DCAF8L1A6NGE4 600 aa10.48□□□□□ -0.73
TOPBP1-203ENST00000503464 FAM50AQ14320 339 aaKnown RBP10.48□□□□□ -0.73
TOPBP1-203ENST00000503464 ZNF644Q9H582 1327 aaPredicted RBP10.47□□□□□ -0.73
TOPBP1-203ENST00000503464 MAPKBP1O60336 1514 aa10.46□□□□□ -0.74
TOPBP1-203ENST00000503464 GCC2Q8IWJ2 1684 aa10.46□□□□□ -0.74
TOPBP1-203ENST00000503464 DAPK1P53355 1430 aa10.45□□□□□ -0.74
TOPBP1-203ENST00000503464 ITGAEP38570 1179 aa10.45□□□□□ -0.74
TOPBP1-203ENST00000503464 ADGBQ8N7X0 1667 aa10.44□□□□□ -0.74
TOPBP1-203ENST00000503464 ARAP3Q8WWN8 1544 aa10.44□□□□□ -0.74
TOPBP1-203ENST00000503464 ABCC5O15440 1437 aa10.44□□□□□ -0.74
TOPBP1-203ENST00000503464 ARHGEF5Q12774 1597 aa10.43□□□□□ -0.74
TOPBP1-203ENST00000503464 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
TOPBP1-203ENST00000503464 CYB5RLQ6IPT4 315 aa10.43□□□□□ -0.74
TOPBP1-203ENST00000503464 CFDP1Q9UEE9 299 aaPredicted RBP10.43□□□□□ -0.74
TOPBP1-203ENST00000503464 KDM6BO15054 1643 aa10.43□□□□□ -0.74
TOPBP1-203ENST00000503464 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
TOPBP1-203ENST00000503464 PLCH2O75038 1416 aa10.42□□□□□ -0.74
TOPBP1-203ENST00000503464 KCNH8Q96L42 1107 aa10.42□□□□□ -0.74
TOPBP1-203ENST00000503464 ABCC1P33527 1531 aa10.42□□□□□ -0.74
TOPBP1-203ENST00000503464 SYCP2Q9BX26 1530 aa10.42□□□□□ -0.74
TOPBP1-203ENST00000503464 HFM1A2PYH4 1435 aa10.41□□□□□ -0.74
TOPBP1-203ENST00000503464 AKNAQ7Z591 1439 aa10.41□□□□□ -0.74
TOPBP1-203ENST00000503464 ARHGEF12Q9NZN5 1544 aa10.41□□□□□ -0.74
TOPBP1-203ENST00000503464 NAIPQ13075 1403 aa10.41□□□□□ -0.74
TOPBP1-203ENST00000503464 RAB3GAP2Q9H2M9 1393 aa10.4□□□□□ -0.74
TOPBP1-203ENST00000503464 MAP3K4Q9Y6R4 1608 aa10.4□□□□□ -0.74
TOPBP1-203ENST00000503464 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
TOPBP1-203ENST00000503464 POTEHQ6S545 545 aa10.4□□□□□ -0.74
TOPBP1-203ENST00000503464 SHANK2Q9UPX8 1470 aa10.4□□□□□ -0.74
TOPBP1-203ENST00000503464 SETD5Q9C0A6 1442 aa10.4□□□□□ -0.75
TOPBP1-203ENST00000503464 DIP2BQ9P265 1576 aa10.39□□□□□ -0.75
TOPBP1-203ENST00000503464 ADGRL2O95490 1459 aa10.39□□□□□ -0.75
TOPBP1-203ENST00000503464 GLI2P10070 1586 aa10.39□□□□□ -0.75
TOPBP1-203ENST00000503464 HRCP23327 699 aa10.38□□□□□ -0.75
TOPBP1-203ENST00000503464 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
TOPBP1-203ENST00000503464 MAST1Q9Y2H9 1570 aa10.38□□□□□ -0.75
TOPBP1-203ENST00000503464 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
TOPBP1-203ENST00000503464 KIF13AQ9H1H9 1805 aa10.37□□□□□ -0.75
TOPBP1-203ENST00000503464 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
TOPBP1-203ENST00000503464 NPM1P06748 294 aaKnown RBP eCLIP10.37□□□□□ -0.75
TOPBP1-203ENST00000503464 PPRC1Q5VV67 1664 aaKnown RBP10.37□□□□□ -0.75
TOPBP1-203ENST00000503464 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
TOPBP1-203ENST00000503464 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
TOPBP1-203ENST00000503464 FANCAO15360 1455 aa10.36□□□□□ -0.75
TOPBP1-203ENST00000503464 PLEKHH2Q8IVE3 1493 aa10.36□□□□□ -0.75
TOPBP1-203ENST00000503464 C9orf84Q5VXU9 1444 aa10.35□□□□□ -0.75
TOPBP1-203ENST00000503464 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
TOPBP1-203ENST00000503464 CFAP74Q9C0B2 1584 aa10.35□□□□□ -0.75
TOPBP1-203ENST00000503464 NCOA1Q15788 1441 aa10.34□□□□□ -0.75
TOPBP1-203ENST00000503464 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
TOPBP1-203ENST00000503464 PLXNC1O60486 1568 aa10.34□□□□□ -0.75
TOPBP1-203ENST00000503464 TRAPPC8Q9Y2L5 1435 aa10.33□□□□□ -0.76
TOPBP1-203ENST00000503464 RRP7BPQ9NSQ0 103 aa10.33□□□□□ -0.76
TOPBP1-203ENST00000503464 INO80Q9ULG1 1556 aaPredicted RBP10.33□□□□□ -0.76
TOPBP1-203ENST00000503464 CD109Q6YHK3 1445 aa10.33□□□□□ -0.76
TOPBP1-203ENST00000503464 ZFYVE16Q7Z3T8 1539 aa10.32□□□□□ -0.76
TOPBP1-203ENST00000503464 DENND4BO75064 1496 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-203ENST00000503464 ADGRL1O94910 1474 aa10.31□□□□□ -0.76
TOPBP1-203ENST00000503464 EFCAB2Q5VUJ9 269 aa10.31□□□□□ -0.76
TOPBP1-203ENST00000503464 CCER1Q8TC90 406 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-203ENST00000503464 TSPOAP1O95153 1857 aa10.31□□□□□ -0.76
TOPBP1-203ENST00000503464 KDM5CP41229 1560 aa10.3□□□□□ -0.76
TOPBP1-203ENST00000503464 RICTORQ6R327 1708 aa10.3□□□□□ -0.76
TOPBP1-203ENST00000503464 KIDINS220Q9ULH0 1771 aa10.29□□□□□ -0.76
TOPBP1-203ENST00000503464 FRMPD1Q5SYB0 1578 aa10.29□□□□□ -0.76
TOPBP1-203ENST00000503464 NEO1Q92859 1461 aa10.29□□□□□ -0.76
TOPBP1-203ENST00000503464 ANKRD30AQ9BXX3 1397 aa10.28□□□□□ -0.76
TOPBP1-203ENST00000503464 SCAPERQ9BY12 1400 aa10.28□□□□□ -0.76
TOPBP1-203ENST00000503464 ATP7AQ04656 1500 aa10.28□□□□□ -0.76
TOPBP1-203ENST00000503464 POGZQ7Z3K3 1410 aa10.27□□□□□ -0.77
TOPBP1-203ENST00000503464 KIF15Q9NS87 1388 aa10.26□□□□□ -0.77
TOPBP1-203ENST00000503464 UNC13BO14795 1591 aa10.26□□□□□ -0.77
TOPBP1-203ENST00000503464 RSPH4AQ5TD94 716 aa10.26□□□□□ -0.77
TOPBP1-203ENST00000503464 RTEL1-TNFRSF6BF6WH68 1400 aa10.25□□□□□ -0.77
TOPBP1-203ENST00000503464 ANKRD50Q9ULJ7 1429 aa10.25□□□□□ -0.77
TOPBP1-203ENST00000503464 PZPP20742 1482 aa10.25□□□□□ -0.77
TOPBP1-203ENST00000503464 KDM5DQ9BY66 1539 aa10.25□□□□□ -0.77
TOPBP1-203ENST00000503464 DUOX2Q9NRD8 1548 aa10.25□□□□□ -0.77
TOPBP1-203ENST00000503464 AFAP1Q8N556 730 aa10.25□□□□□ -0.77
TOPBP1-203ENST00000503464 HECW2Q9P2P5 1572 aa10.25□□□□□ -0.77
TOPBP1-203ENST00000503464 ABCA6Q8N139 1617 aa10.25□□□□□ -0.77
TOPBP1-203ENST00000503464 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
TOPBP1-203ENST00000503464 TSPY4P0CV99 314 aa10.24□□□□□ -0.77
TOPBP1-203ENST00000503464 TSPY10P0CW01 314 aa10.24□□□□□ -0.77
TOPBP1-203ENST00000503464 FAM69CQ0P6D2 419 aa10.24□□□□□ -0.77
TOPBP1-203ENST00000503464 DNAJC5Q9H3Z4 198 aa10.24□□□□□ -0.77
TOPBP1-203ENST00000503464 MAGI2Q86UL8 1455 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms