RNA–Protein interactions for RNA: ENST00000503299.1

AC109349.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC109349.1, Length 758 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109349.1-201ENST00000503299 SOX12O15370 315 aa14.16□□□□□ -0.14
AC109349.1-201ENST00000503299 LSM11P83369 360 aaKnown RBP eCLIP14.16□□□□□ -0.14
AC109349.1-201ENST00000503299 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
AC109349.1-201ENST00000503299 MS4A4AQ96JQ5 239 aa14.12□□□□□ -0.15
AC109349.1-201ENST00000503299 KHSRPQ92945 711 aaKnown RBP eCLIP14.11□□□□□ -0.15
AC109349.1-201ENST00000503299 PLA2G2EQ9NZK7 142 aa14.07□□□□□ -0.16
AC109349.1-201ENST00000503299 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
AC109349.1-201ENST00000503299 PBX2P40425 430 aa14.04□□□□□ -0.16
AC109349.1-201ENST00000503299 HCSTQ9UBK5 93 aa14.01□□□□□ -0.17
AC109349.1-201ENST00000503299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.96□□□□□ -0.17
AC109349.1-201ENST00000503299 RIOK3O14730 519 aaKnown RBP13.96□□□□□ -0.17
AC109349.1-201ENST00000503299 POTEEQ6S8J3 1075 aa13.96□□□□□ -0.17
AC109349.1-201ENST00000503299 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.17
AC109349.1-201ENST00000503299 NUDT7P0C024 238 aa13.94□□□□□ -0.18
AC109349.1-201ENST00000503299 AXIN2Q9Y2T1 843 aa13.94□□□□□ -0.18
AC109349.1-201ENST00000503299 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
AC109349.1-201ENST00000503299 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
AC109349.1-201ENST00000503299 NLRP6P59044 892 aa13.9□□□□□ -0.18
AC109349.1-201ENST00000503299 RNF25Q96BH1 459 aaPredicted RBP13.9□□□□□ -0.18
AC109349.1-201ENST00000503299 KIF3CO14782 793 aa13.89□□□□□ -0.19
AC109349.1-201ENST00000503299 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
AC109349.1-201ENST00000503299 C2orf72A6NCS6 295 aa13.85□□□□□ -0.19
AC109349.1-201ENST00000503299 ADGRD1Q6QNK2 874 aa13.85□□□□□ -0.19
AC109349.1-201ENST00000503299 SLC34A2O95436 690 aa13.84□□□□□ -0.19
AC109349.1-201ENST00000503299 PCDHGA4Q9Y5G9 962 aa13.84□□□□□ -0.19
AC109349.1-201ENST00000503299 ARHGAP33O14559 1287 aa13.82□□□□□ -0.2
AC109349.1-201ENST00000503299 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
AC109349.1-201ENST00000503299 TK2O00142 265 aa13.76□□□□□ -0.21
AC109349.1-201ENST00000503299 HRO43593 1189 aa13.74□□□□□ -0.21
AC109349.1-201ENST00000503299 MFRPQ9BY79 579 aa13.73□□□□□ -0.21
AC109349.1-201ENST00000503299 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
AC109349.1-201ENST00000503299 DMRTA1Q5VZB9 504 aa13.68□□□□□ -0.22
AC109349.1-201ENST00000503299 TMC2Q8TDI7 906 aa13.68□□□□□ -0.22
AC109349.1-201ENST00000503299 KCTD12Q96CX2 325 aaKnown RBP13.68□□□□□ -0.22
AC109349.1-201ENST00000503299 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
AC109349.1-201ENST00000503299 STK24Q9Y6E0 443 aa13.67□□□□□ -0.22
AC109349.1-201ENST00000503299 PSEN2P49810 448 aa13.66□□□□□ -0.22
AC109349.1-201ENST00000503299 KDM4FA0A1W2PPD8 638 aa13.65□□□□□ -0.22
AC109349.1-201ENST00000503299 RGS20O76081 388 aa13.65□□□□□ -0.22
AC109349.1-201ENST00000503299 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
AC109349.1-201ENST00000503299 PTCD2Q8WV60 388 aaKnown RBP13.58□□□□□ -0.24
AC109349.1-201ENST00000503299 IRX2Q9BZI1 471 aaPredicted RBP13.57□□□□□ -0.24
AC109349.1-201ENST00000503299 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
AC109349.1-201ENST00000503299 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
AC109349.1-201ENST00000503299 STK25O00506 426 aa13.54□□□□□ -0.24
AC109349.1-201ENST00000503299 PTPN5P54829 565 aa13.53□□□□□ -0.24
AC109349.1-201ENST00000503299 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
AC109349.1-201ENST00000503299 KCNK17Q96T54 332 aa13.47□□□□□ -0.25
AC109349.1-201ENST00000503299 VPS9D1Q9Y2B5 631 aa13.47□□□□□ -0.25
AC109349.1-201ENST00000503299 A0A0G2JS52 829 aa13.45□□□□□ -0.26
AC109349.1-201ENST00000503299 TBC1D12O60347 775 aa13.44□□□□□ -0.26
AC109349.1-201ENST00000503299 PPP1R37O75864 691 aa13.43□□□□□ -0.26
AC109349.1-201ENST00000503299 FOXK1P85037 733 aa13.43□□□□□ -0.26
AC109349.1-201ENST00000503299 PLPP6Q8IY26 295 aa13.43□□□□□ -0.26
AC109349.1-201ENST00000503299 THSD4Q6ZMP0 1018 aa13.4□□□□□ -0.26
AC109349.1-201ENST00000503299 SLC4A5Q9BY07 1137 aa13.4□□□□□ -0.26
AC109349.1-201ENST00000503299 BHMG1C9JSJ3 638 aaPredicted RBP13.36□□□□□ -0.27
AC109349.1-201ENST00000503299 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
AC109349.1-201ENST00000503299 GOLGA8CPA6NN73 597 aa13.32□□□□□ -0.28
AC109349.1-201ENST00000503299 DSG2Q14126 1118 aa13.32□□□□□ -0.28
AC109349.1-201ENST00000503299 WNT2BQ93097 391 aa13.31□□□□□ -0.28
AC109349.1-201ENST00000503299 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
AC109349.1-201ENST00000503299 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
AC109349.1-201ENST00000503299 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
AC109349.1-201ENST00000503299 ZNF454Q8N9F8 522 aa13.28□□□□□ -0.28
AC109349.1-201ENST00000503299 OXER1Q8TDS5 423 aa13.25□□□□□ -0.29
AC109349.1-201ENST00000503299 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
AC109349.1-201ENST00000503299 PTPREP23469 700 aa13.24□□□□□ -0.29
AC109349.1-201ENST00000503299 Q6ZNB5 142 aa13.23□□□□□ -0.29
AC109349.1-201ENST00000503299 RGL2O15211 777 aa13.21□□□□□ -0.29
AC109349.1-201ENST00000503299 FOSBP53539 338 aa13.2□□□□□ -0.3
AC109349.1-201ENST00000503299 NBPF3Q9H094 633 aa13.19□□□□□ -0.3
AC109349.1-201ENST00000503299 ITGBL1O95965 494 aaPredicted RBP13.18□□□□□ -0.3
AC109349.1-201ENST00000503299 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.3
AC109349.1-201ENST00000503299 JPH4Q96JJ6 628 aa13.11□□□□□ -0.31
AC109349.1-201ENST00000503299 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
AC109349.1-201ENST00000503299 PKD2Q13563 968 aa13.1□□□□□ -0.31
AC109349.1-201ENST00000503299 ZDHHC16Q969W1 377 aa13.09□□□□□ -0.31
AC109349.1-201ENST00000503299 ANKK1Q8NFD2 765 aa13.08□□□□□ -0.32
AC109349.1-201ENST00000503299 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.32
AC109349.1-201ENST00000503299 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
AC109349.1-201ENST00000503299 RABGEF1Q9UJ41 708 aa13.04□□□□□ -0.32
AC109349.1-201ENST00000503299 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
AC109349.1-201ENST00000503299 PPP1R15BQ5SWA1 713 aa13.02□□□□□ -0.33
AC109349.1-201ENST00000503299 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
AC109349.1-201ENST00000503299 EVI5O60447 810 aa13.01□□□□□ -0.33
AC109349.1-201ENST00000503299 BCAMP50895 628 aa13.01□□□□□ -0.33
AC109349.1-201ENST00000503299 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
AC109349.1-201ENST00000503299 KCNC4Q03721 635 aa13□□□□□ -0.33
AC109349.1-201ENST00000503299 PPP1R3GB7ZBB8 358 aa12.99□□□□□ -0.33
AC109349.1-201ENST00000503299 LCE2BO14633 110 aa12.99□□□□□ -0.33
AC109349.1-201ENST00000503299 TRAF7Q6Q0C0 670 aa12.99□□□□□ -0.33
AC109349.1-201ENST00000503299 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
AC109349.1-201ENST00000503299 LAPTM4BQ86VI4 370 aa12.97□□□□□ -0.33
AC109349.1-201ENST00000503299 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
AC109349.1-201ENST00000503299 GFRA3O60609 400 aa12.94□□□□□ -0.34
AC109349.1-201ENST00000503299 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
AC109349.1-201ENST00000503299 ZFRQ96KR1 1074 aaKnown RBP12.92□□□□□ -0.34
AC109349.1-201ENST00000503299 COL9A1P20849 921 aa12.91□□□□□ -0.34
AC109349.1-201ENST00000503299 PDE4AP27815 886 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms