RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 ITSN2Q9NZM3 1697 aa14.05□□□□□ -0.16
RNF4-203ENST00000503123 VPS8Q8N3P4 1428 aa14.05□□□□□ -0.16
RNF4-203ENST00000503123 ARHGEF40Q8TER5 1519 aa14.05□□□□□ -0.16
RNF4-203ENST00000503123 TIAM1Q13009 1591 aa14.04□□□□□ -0.16
RNF4-203ENST00000503123 EFCAB2Q5VUJ9 269 aa14.03□□□□□ -0.16
RNF4-203ENST00000503123 SUPT6HQ7KZ85 1726 aaKnown RBP14.02□□□□□ -0.16
RNF4-203ENST00000503123 MAGI2Q86UL8 1455 aa14.02□□□□□ -0.16
RNF4-203ENST00000503123 POGZQ7Z3K3 1410 aa14.02□□□□□ -0.16
RNF4-203ENST00000503123 KDM5CP41229 1560 aa14.01□□□□□ -0.17
RNF4-203ENST00000503123 ABCC1P33527 1531 aa14.01□□□□□ -0.17
RNF4-203ENST00000503123 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
RNF4-203ENST00000503123 MTUS2Q5JR59 1369 aa14.01□□□□□ -0.17
RNF4-203ENST00000503123 RAPGEF3O95398 923 aa14.01□□□□□ -0.17
RNF4-203ENST00000503123 ZNF518AQ6AHZ1 1483 aa14□□□□□ -0.17
RNF4-203ENST00000503123 SCAPERQ9BY12 1400 aa14□□□□□ -0.17
RNF4-203ENST00000503123 AEBP2Q6ZN18 517 aaPredicted RBP13.99□□□□□ -0.17
RNF4-203ENST00000503123 ZFYVE16Q7Z3T8 1539 aa13.99□□□□□ -0.17
RNF4-203ENST00000503123 SAMD9LQ8IVG5 1584 aa13.98□□□□□ -0.17
RNF4-203ENST00000503123 HECW2Q9P2P5 1572 aa13.98□□□□□ -0.17
RNF4-203ENST00000503123 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
RNF4-203ENST00000503123 BCORL1Q5H9F3 1711 aa13.98□□□□□ -0.17
RNF4-203ENST00000503123 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
RNF4-203ENST00000503123 ADAMTSL3P82987 1691 aa13.97□□□□□ -0.17
RNF4-203ENST00000503123 PLEKHH2Q8IVE3 1493 aa13.94□□□□□ -0.18
RNF4-203ENST00000503123 SIGLEC1Q9BZZ2 1709 aa13.94□□□□□ -0.18
RNF4-203ENST00000503123 CCNB3Q8WWL7 1395 aa13.94□□□□□ -0.18
RNF4-203ENST00000503123 KIDINS220Q9ULH0 1771 aa13.94□□□□□ -0.18
RNF4-203ENST00000503123 LRRC9Q6ZRR7 1453 aa13.93□□□□□ -0.18
RNF4-203ENST00000503123 REREQ9P2R6 1566 aa13.93□□□□□ -0.18
RNF4-203ENST00000503123 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
RNF4-203ENST00000503123 SYCP2Q9BX26 1530 aa13.92□□□□□ -0.18
RNF4-203ENST00000503123 ARHGEF12Q9NZN5 1544 aa13.92□□□□□ -0.18
RNF4-203ENST00000503123 NCOA2Q15596 1464 aa13.92□□□□□ -0.18
RNF4-203ENST00000503123 YEATS2Q9ULM3 1422 aa13.91□□□□□ -0.18
RNF4-203ENST00000503123 KIAA1107Q9UPP5 1409 aa13.91□□□□□ -0.18
RNF4-203ENST00000503123 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
RNF4-203ENST00000503123 DIP2CQ9Y2E4 1556 aa13.91□□□□□ -0.18
RNF4-203ENST00000503123 ATP10AO60312 1499 aa13.9□□□□□ -0.18
RNF4-203ENST00000503123 FER1L4A9Z1Z3 1794 aa13.9□□□□□ -0.18
RNF4-203ENST00000503123 INO80Q9ULG1 1556 aaPredicted RBP13.89□□□□□ -0.19
RNF4-203ENST00000503123 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
RNF4-203ENST00000503123 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
RNF4-203ENST00000503123 CFDP1Q9UEE9 299 aaPredicted RBP13.88□□□□□ -0.19
RNF4-203ENST00000503123 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
RNF4-203ENST00000503123 ADGBQ8N7X0 1667 aa13.87□□□□□ -0.19
RNF4-203ENST00000503123 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
RNF4-203ENST00000503123 AFAP1Q8N556 730 aa13.86□□□□□ -0.19
RNF4-203ENST00000503123 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
RNF4-203ENST00000503123 ARHGEF5Q12774 1597 aa13.84□□□□□ -0.19
RNF4-203ENST00000503123 CAMSAP2Q08AD1 1489 aa13.84□□□□□ -0.19
RNF4-203ENST00000503123 AGLP35573 1532 aa13.84□□□□□ -0.19
RNF4-203ENST00000503123 MBD5Q9P267 1494 aa13.83□□□□□ -0.2
RNF4-203ENST00000503123 ZNF777Q9ULD5 760 aaPredicted RBP13.83□□□□□ -0.2
RNF4-203ENST00000503123 SETD1BQ9UPS6 1966 aaKnown RBP13.83□□□□□ -0.2
RNF4-203ENST00000503123 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
RNF4-203ENST00000503123 PTPRMP28827 1452 aa13.81□□□□□ -0.2
RNF4-203ENST00000503123 PLXNC1O60486 1568 aa13.81□□□□□ -0.2
RNF4-203ENST00000503123 APLP2Q06481 763 aa13.81□□□□□ -0.2
RNF4-203ENST00000503123 MYOM3Q5VTT5 1437 aa13.81□□□□□ -0.2
RNF4-203ENST00000503123 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
RNF4-203ENST00000503123 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
RNF4-203ENST00000503123 RTEL1-TNFRSF6BF6WH68 1400 aa13.8□□□□□ -0.2
RNF4-203ENST00000503123 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
RNF4-203ENST00000503123 HNRNPMP52272 730 aaKnown RBP eCLIP13.79□□□□□ -0.2
RNF4-203ENST00000503123 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
RNF4-203ENST00000503123 SPAG9O60271 1321 aaKnown RBP13.79□□□□□ -0.2
RNF4-203ENST00000503123 CROCC2H7BZ55 1655 aa13.79□□□□□ -0.2
RNF4-203ENST00000503123 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
RNF4-203ENST00000503123 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
RNF4-203ENST00000503123 MROH2AA6NES4 1674 aa13.77□□□□□ -0.21
RNF4-203ENST00000503123 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
RNF4-203ENST00000503123 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
RNF4-203ENST00000503123 A2MP01023 1474 aa13.74□□□□□ -0.21
RNF4-203ENST00000503123 C3P01024 1663 aa13.74□□□□□ -0.21
RNF4-203ENST00000503123 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
RNF4-203ENST00000503123 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
RNF4-203ENST00000503123 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
RNF4-203ENST00000503123 FGD6Q6ZV73 1430 aa13.72□□□□□ -0.21
RNF4-203ENST00000503123 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
RNF4-203ENST00000503123 CLTCQ00610 1675 aaKnown RBP13.7□□□□□ -0.22
RNF4-203ENST00000503123 SHANK2Q9UPX8 1470 aa13.7□□□□□ -0.22
RNF4-203ENST00000503123 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
RNF4-203ENST00000503123 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
RNF4-203ENST00000503123 MLECQ14165 292 aa13.69□□□□□ -0.22
RNF4-203ENST00000503123 DHX29Q7Z478 1369 aaKnown RBP13.68□□□□□ -0.22
RNF4-203ENST00000503123 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
RNF4-203ENST00000503123 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
RNF4-203ENST00000503123 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
RNF4-203ENST00000503123 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
RNF4-203ENST00000503123 PPP6R1Q9UPN7 881 aa13.65□□□□□ -0.22
RNF4-203ENST00000503123 ZC3H13Q5T200 1668 aaKnown RBP13.65□□□□□ -0.22
RNF4-203ENST00000503123 DUOX2Q9NRD8 1548 aa13.64□□□□□ -0.23
RNF4-203ENST00000503123 DAPK1P53355 1430 aa13.64□□□□□ -0.23
RNF4-203ENST00000503123 ESF1Q9H501 851 aaKnown RBP13.63□□□□□ -0.23
RNF4-203ENST00000503123 ABCC5O15440 1437 aa13.63□□□□□ -0.23
RNF4-203ENST00000503123 KDM5DQ9BY66 1539 aa13.61□□□□□ -0.23
RNF4-203ENST00000503123 ZNF142P52746 1687 aaPredicted RBP13.61□□□□□ -0.23
RNF4-203ENST00000503123 NPATQ14207 1427 aa13.61□□□□□ -0.23
RNF4-203ENST00000503123 DEPDC5O75140 1603 aa13.61□□□□□ -0.23
RNF4-203ENST00000503123 CFAP65Q6ZU64 1925 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms