RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 FAM163AQ96GL9 167 aaPredicted RBP10.96□□□□□ -0.65
RFC1-205ENST00000502991 C2orf72A6NCS6 295 aa10.95□□□□□ -0.66
RFC1-205ENST00000502991 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
RFC1-205ENST00000502991 KIF3CO14782 793 aa10.91□□□□□ -0.66
RFC1-205ENST00000502991 LCE2DQ5TA82 110 aaPredicted RBP10.91□□□□□ -0.66
RFC1-205ENST00000502991 TMC2Q8TDI7 906 aa10.91□□□□□ -0.66
RFC1-205ENST00000502991 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
RFC1-205ENST00000502991 ST18O60284 1047 aa10.87□□□□□ -0.67
RFC1-205ENST00000502991 NCKAP5LQ9HCH0 1330 aa10.86□□□□□ -0.67
RFC1-205ENST00000502991 SNPHO15079 494 aa10.85□□□□□ -0.67
RFC1-205ENST00000502991 DSG2Q14126 1118 aa10.84□□□□□ -0.67
RFC1-205ENST00000502991 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
RFC1-205ENST00000502991 GPHNQ9NQX3 736 aaPredicted RBP10.84□□□□□ -0.67
RFC1-205ENST00000502991 PLPP6Q8IY26 295 aa10.81□□□□□ -0.68
RFC1-205ENST00000502991 LARP6Q9BRS8 491 aaKnown RBP10.81□□□□□ -0.68
RFC1-205ENST00000502991 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
RFC1-205ENST00000502991 MARVELD3Q96A59 401 aa10.8□□□□□ -0.68
RFC1-205ENST00000502991 PDE4AP27815 886 aa10.79□□□□□ -0.68
RFC1-205ENST00000502991 FOXK1P85037 733 aa10.79□□□□□ -0.68
RFC1-205ENST00000502991 DOK7Q18PE1 504 aa10.79□□□□□ -0.68
RFC1-205ENST00000502991 ZNF710Q8N1W2 664 aa10.79□□□□□ -0.68
RFC1-205ENST00000502991 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
RFC1-205ENST00000502991 KHSRPQ92945 711 aaKnown RBP eCLIP10.77□□□□□ -0.69
RFC1-205ENST00000502991 PPP1R15BQ5SWA1 713 aa10.76□□□□□ -0.69
RFC1-205ENST00000502991 POTEMA6NI47 508 aa10.75□□□□□ -0.69
RFC1-205ENST00000502991 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
RFC1-205ENST00000502991 ARSIQ5FYB1 569 aa10.75□□□□□ -0.69
RFC1-205ENST00000502991 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
RFC1-205ENST00000502991 DDX27Q96GQ7 796 aaKnown RBP10.74□□□□□ -0.69
RFC1-205ENST00000502991 RIMBP2O15034 1052 aa10.73□□□□□ -0.69
RFC1-205ENST00000502991 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
RFC1-205ENST00000502991 UPF1Q92900 1129 aaKnown RBP eCLIP10.72□□□□□ -0.69
RFC1-205ENST00000502991 MFSD10Q14728 455 aa10.71□□□□□ -0.69
RFC1-205ENST00000502991 HOXB1P14653 301 aaPredicted RBP10.7□□□□□ -0.7
RFC1-205ENST00000502991 EMP3P54852 163 aa10.7□□□□□ -0.7
RFC1-205ENST00000502991 PCDHGA4Q9Y5G9 962 aa10.69□□□□□ -0.7
RFC1-205ENST00000502991 SLC34A2O95436 690 aa10.68□□□□□ -0.7
RFC1-205ENST00000502991 POTEB3A0JP26 581 aa10.67□□□□□ -0.7
RFC1-205ENST00000502991 NUDT7P0C024 238 aa10.67□□□□□ -0.7
RFC1-205ENST00000502991 POTEBQ6S5H4 581 aa10.67□□□□□ -0.7
RFC1-205ENST00000502991 ZSWIM6Q9HCJ5 1215 aa10.67□□□□□ -0.7
RFC1-205ENST00000502991 FAM205CA6NFA0 338 aa10.66□□□□□ -0.7
RFC1-205ENST00000502991 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
RFC1-205ENST00000502991 EMILIN3Q9NT22 766 aa10.65□□□□□ -0.7
RFC1-205ENST00000502991 OXER1Q8TDS5 423 aa10.64□□□□□ -0.71
RFC1-205ENST00000502991 PTCD2Q8WV60 388 aaKnown RBP10.64□□□□□ -0.71
RFC1-205ENST00000502991 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
RFC1-205ENST00000502991 HS3ST6Q96QI5 342 aa10.61□□□□□ -0.71
RFC1-205ENST00000502991 ERBB3P21860 1342 aa10.6□□□□□ -0.71
RFC1-205ENST00000502991 WDR70Q9NW82 654 aa10.6□□□□□ -0.71
RFC1-205ENST00000502991 VARS2Q5ST30 1063 aaKnown RBP10.59□□□□□ -0.71
RFC1-205ENST00000502991 CAMK2BQ13554 666 aa10.58□□□□□ -0.72
RFC1-205ENST00000502991 LHX6Q9UPM6 363 aa10.58□□□□□ -0.72
RFC1-205ENST00000502991 KDM4FA0A1W2PPD8 638 aa10.57□□□□□ -0.72
RFC1-205ENST00000502991 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
RFC1-205ENST00000502991 DPYSL4O14531 572 aa10.57□□□□□ -0.72
RFC1-205ENST00000502991 TBC1D12O60347 775 aa10.57□□□□□ -0.72
RFC1-205ENST00000502991 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
RFC1-205ENST00000502991 CDAN1Q8IWY9 1227 aa10.56□□□□□ -0.72
RFC1-205ENST00000502991 E2F4Q16254 413 aa10.55□□□□□ -0.72
RFC1-205ENST00000502991 EVI5O60447 810 aa10.53□□□□□ -0.72
RFC1-205ENST00000502991 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
RFC1-205ENST00000502991 KCNV2Q8TDN2 545 aa10.48□□□□□ -0.73
RFC1-205ENST00000502991 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
RFC1-205ENST00000502991 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
RFC1-205ENST00000502991 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.73
RFC1-205ENST00000502991 ZNF687Q8N1G0 1237 aa10.45□□□□□ -0.74
RFC1-205ENST00000502991 ZNF454Q8N9F8 522 aa10.45□□□□□ -0.74
RFC1-205ENST00000502991 AXIN2Q9Y2T1 843 aa10.45□□□□□ -0.74
RFC1-205ENST00000502991 POTEEQ6S8J3 1075 aa10.43□□□□□ -0.74
RFC1-205ENST00000502991 DDX12PQ92771 950 aa10.43□□□□□ -0.74
RFC1-205ENST00000502991 FOSBP53539 338 aa10.42□□□□□ -0.74
RFC1-205ENST00000502991 PDIA6Q15084 440 aa10.4□□□□□ -0.74
RFC1-205ENST00000502991 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
RFC1-205ENST00000502991 ARIH1Q9Y4X5 557 aaPredicted RBP10.39□□□□□ -0.75
RFC1-205ENST00000502991 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
RFC1-205ENST00000502991 PSDA5PKW4 1024 aaPredicted RBP10.38□□□□□ -0.75
RFC1-205ENST00000502991 PSEN2P49810 448 aa10.38□□□□□ -0.75
RFC1-205ENST00000502991 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
RFC1-205ENST00000502991 JPH4Q96JJ6 628 aa10.38□□□□□ -0.75
RFC1-205ENST00000502991 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
RFC1-205ENST00000502991 SPDYE16A6NNV3 312 aaPredicted RBP10.36□□□□□ -0.75
RFC1-205ENST00000502991 ARHGEF1Q92888 912 aaKnown RBP10.36□□□□□ -0.75
RFC1-205ENST00000502991 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
RFC1-205ENST00000502991 ZDHHC16Q969W1 377 aa10.35□□□□□ -0.75
RFC1-205ENST00000502991 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
RFC1-205ENST00000502991 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
RFC1-205ENST00000502991 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
RFC1-205ENST00000502991 PHF14O94880 888 aa10.33□□□□□ -0.76
RFC1-205ENST00000502991 ANKRD13DQ6ZTN6 518 aa10.33□□□□□ -0.76
RFC1-205ENST00000502991 P3H3Q8IVL6 736 aa10.33□□□□□ -0.76
RFC1-205ENST00000502991 ARHGAP33O14559 1287 aa10.32□□□□□ -0.76
RFC1-205ENST00000502991 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
RFC1-205ENST00000502991 PTGER2P43116 358 aa10.32□□□□□ -0.76
RFC1-205ENST00000502991 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
RFC1-205ENST00000502991 NBR1Q14596 966 aa10.32□□□□□ -0.76
RFC1-205ENST00000502991 PBX2P40425 430 aa10.31□□□□□ -0.76
RFC1-205ENST00000502991 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
RFC1-205ENST00000502991 TYW1BQ6NUM6 668 aa10.31□□□□□ -0.76
RFC1-205ENST00000502991 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms