RNA–Protein interactions for RNA: ENST00000502755.5

PRDM9-202, Transcript of PR/SET domain 9, humanhuman

TSL 4

Gene PRDM9, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-202ENST00000502755 EFCAB2Q5VUJ9 269 aa18.21■□□□□ 0.51
PRDM9-202ENST00000502755 GPATCH8Q9UKJ3 1502 aaKnown RBP18.21■□□□□ 0.51
PRDM9-202ENST00000502755 ITSN2Q9NZM3 1697 aa18.21■□□□□ 0.51
PRDM9-202ENST00000502755 FANCAO15360 1455 aa18.2■□□□□ 0.5
PRDM9-202ENST00000502755 NEO1Q92859 1461 aa18.2■□□□□ 0.5
PRDM9-202ENST00000502755 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
PRDM9-202ENST00000502755 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
PRDM9-202ENST00000502755 AKNAQ7Z591 1439 aa18.16■□□□□ 0.5
PRDM9-202ENST00000502755 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
PRDM9-202ENST00000502755 KDM6BO15054 1643 aa18.15■□□□□ 0.5
PRDM9-202ENST00000502755 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
PRDM9-202ENST00000502755 MYOM3Q5VTT5 1437 aa18.13■□□□□ 0.49
PRDM9-202ENST00000502755 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
PRDM9-202ENST00000502755 SAMD9LQ8IVG5 1584 aa18.09■□□□□ 0.49
PRDM9-202ENST00000502755 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
PRDM9-202ENST00000502755 SCAPERQ9BY12 1400 aa18.09■□□□□ 0.49
PRDM9-202ENST00000502755 DENND4BO75064 1496 aaPredicted RBP18.08■□□□□ 0.49
PRDM9-202ENST00000502755 PLEKHH2Q8IVE3 1493 aa18.08■□□□□ 0.49
PRDM9-202ENST00000502755 COL17A1Q9UMD9 1497 aaPredicted RBP18.08■□□□□ 0.49
PRDM9-202ENST00000502755 ABCC1P33527 1531 aa18.07■□□□□ 0.48
PRDM9-202ENST00000502755 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
PRDM9-202ENST00000502755 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
PRDM9-202ENST00000502755 RICTORQ6R327 1708 aa18.05■□□□□ 0.48
PRDM9-202ENST00000502755 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
PRDM9-202ENST00000502755 RAPGEF3O95398 923 aa18.04■□□□□ 0.48
PRDM9-202ENST00000502755 FGD6Q6ZV73 1430 aa18.04■□□□□ 0.48
PRDM9-202ENST00000502755 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
PRDM9-202ENST00000502755 HNRNPMP52272 730 aaKnown RBP eCLIP18.03■□□□□ 0.48
PRDM9-202ENST00000502755 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
PRDM9-202ENST00000502755 ARHGEF12Q9NZN5 1544 aa18.03■□□□□ 0.48
PRDM9-202ENST00000502755 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
PRDM9-202ENST00000502755 ZNF518AQ6AHZ1 1483 aa18.01■□□□□ 0.47
PRDM9-202ENST00000502755 FRMPD1Q5SYB0 1578 aa18.01■□□□□ 0.47
PRDM9-202ENST00000502755 RSPH4AQ5TD94 716 aa18■□□□□ 0.47
PRDM9-202ENST00000502755 TRAPPC8Q9Y2L5 1435 aa17.99■□□□□ 0.47
PRDM9-202ENST00000502755 AFAP1Q8N556 730 aa17.99■□□□□ 0.47
PRDM9-202ENST00000502755 TCOF1Q13428 1488 aaKnown RBP17.99■□□□□ 0.47
PRDM9-202ENST00000502755 MBD5Q9P267 1494 aa17.98■□□□□ 0.47
PRDM9-202ENST00000502755 KDM5CP41229 1560 aa17.97■□□□□ 0.47
PRDM9-202ENST00000502755 ARHGEF5Q12774 1597 aa17.97■□□□□ 0.47
PRDM9-202ENST00000502755 ZMYM4Q5VZL5 1548 aa17.97■□□□□ 0.47
PRDM9-202ENST00000502755 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.47
PRDM9-202ENST00000502755 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
PRDM9-202ENST00000502755 CCDC141Q6ZP82 1450 aa17.95■□□□□ 0.46
PRDM9-202ENST00000502755 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
PRDM9-202ENST00000502755 SPAG9O60271 1321 aaKnown RBP17.94■□□□□ 0.46
PRDM9-202ENST00000502755 HECW2Q9P2P5 1572 aa17.93■□□□□ 0.46
PRDM9-202ENST00000502755 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
PRDM9-202ENST00000502755 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
PRDM9-202ENST00000502755 MLH3Q9UHC1 1453 aa17.93■□□□□ 0.46
PRDM9-202ENST00000502755 RRBP1Q9P2E9 1410 aaKnown RBP17.91■□□□□ 0.46
PRDM9-202ENST00000502755 ZFYVE16Q7Z3T8 1539 aa17.91■□□□□ 0.46
PRDM9-202ENST00000502755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRDM9-202ENST00000502755 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
PRDM9-202ENST00000502755 KIDINS220Q9ULH0 1771 aa17.9■□□□□ 0.46
PRDM9-202ENST00000502755 CROCC2H7BZ55 1655 aa17.89■□□□□ 0.45
PRDM9-202ENST00000502755 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.45
PRDM9-202ENST00000502755 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
PRDM9-202ENST00000502755 ARHGEF40Q8TER5 1519 aa17.88■□□□□ 0.45
PRDM9-202ENST00000502755 INO80Q9ULG1 1556 aaPredicted RBP17.88■□□□□ 0.45
PRDM9-202ENST00000502755 ABCC5O15440 1437 aa17.88■□□□□ 0.45
PRDM9-202ENST00000502755 DAPK1P53355 1430 aa17.88■□□□□ 0.45
PRDM9-202ENST00000502755 YEATS2Q9ULM3 1422 aa17.87■□□□□ 0.45
PRDM9-202ENST00000502755 MAST1Q9Y2H9 1570 aa17.87■□□□□ 0.45
PRDM9-202ENST00000502755 ATP10AO60312 1499 aa17.85■□□□□ 0.45
PRDM9-202ENST00000502755 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
PRDM9-202ENST00000502755 SHANK2Q9UPX8 1470 aa17.85■□□□□ 0.45
PRDM9-202ENST00000502755 ABCA6Q8N139 1617 aa17.84■□□□□ 0.45
PRDM9-202ENST00000502755 DIP2CQ9Y2E4 1556 aa17.84■□□□□ 0.45
PRDM9-202ENST00000502755 ADGBQ8N7X0 1667 aa17.83■□□□□ 0.44
PRDM9-202ENST00000502755 ITGAEP38570 1179 aa17.81■□□□□ 0.44
PRDM9-202ENST00000502755 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
PRDM9-202ENST00000502755 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
PRDM9-202ENST00000502755 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
PRDM9-202ENST00000502755 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
PRDM9-202ENST00000502755 ARID4BQ4LE39 1312 aaPredicted RBP17.77■□□□□ 0.44
PRDM9-202ENST00000502755 A2MP01023 1474 aa17.77■□□□□ 0.44
PRDM9-202ENST00000502755 PTPRKQ15262 1439 aa17.77■□□□□ 0.44
PRDM9-202ENST00000502755 ADGRL2O95490 1459 aa17.76■□□□□ 0.43
PRDM9-202ENST00000502755 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
PRDM9-202ENST00000502755 NCOA1Q15788 1441 aa17.75■□□□□ 0.43
PRDM9-202ENST00000502755 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
PRDM9-202ENST00000502755 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
PRDM9-202ENST00000502755 ROCK1Q13464 1354 aa17.74■□□□□ 0.43
PRDM9-202ENST00000502755 KIF15Q9NS87 1388 aa17.74■□□□□ 0.43
PRDM9-202ENST00000502755 AGLP35573 1532 aa17.73■□□□□ 0.43
PRDM9-202ENST00000502755 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
PRDM9-202ENST00000502755 BCORL1Q5H9F3 1711 aa17.69■□□□□ 0.42
PRDM9-202ENST00000502755 EIF2AK4Q9P2K8 1649 aaKnown RBP17.69■□□□□ 0.42
PRDM9-202ENST00000502755 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
PRDM9-202ENST00000502755 KIF3BO15066 747 aa17.67■□□□□ 0.42
PRDM9-202ENST00000502755 MLECQ14165 292 aa17.67■□□□□ 0.42
PRDM9-202ENST00000502755 ANKRD50Q9ULJ7 1429 aa17.64■□□□□ 0.42
PRDM9-202ENST00000502755 GGT6Q6P531 493 aa17.64■□□□□ 0.41
PRDM9-202ENST00000502755 ADAMTSL3P82987 1691 aa17.64■□□□□ 0.41
PRDM9-202ENST00000502755 GCC2Q8IWJ2 1684 aa17.63■□□□□ 0.41
PRDM9-202ENST00000502755 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
PRDM9-202ENST00000502755 HFM1A2PYH4 1435 aa17.62■□□□□ 0.41
PRDM9-202ENST00000502755 RNF17Q9BXT8 1623 aaKnown RBP17.61■□□□□ 0.41
PRDM9-202ENST00000502755 FER1L4A9Z1Z3 1794 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms