RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 GPR153Q6NV75 609 aa12.38□□□□□ -0.43
RFC1-204ENST00000502706 PTGER2P43116 358 aa12.36□□□□□ -0.43
RFC1-204ENST00000502706 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
RFC1-204ENST00000502706 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
RFC1-204ENST00000502706 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
RFC1-204ENST00000502706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
RFC1-204ENST00000502706 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
RFC1-204ENST00000502706 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
RFC1-204ENST00000502706 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
RFC1-204ENST00000502706 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
RFC1-204ENST00000502706 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
RFC1-204ENST00000502706 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
RFC1-204ENST00000502706 ZNF316A6NFI3 1004 aaPredicted RBP12.23□□□□□ -0.45
RFC1-204ENST00000502706 NLRP6P59044 892 aa12.19□□□□□ -0.46
RFC1-204ENST00000502706 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.46
RFC1-204ENST00000502706 BCANQ96GW7 911 aa12.19□□□□□ -0.46
RFC1-204ENST00000502706 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.46
RFC1-204ENST00000502706 FBXO22Q8NEZ5 403 aa12.14□□□□□ -0.47
RFC1-204ENST00000502706 PBX2P40425 430 aa12.13□□□□□ -0.47
RFC1-204ENST00000502706 PRKCSHP14314 528 aaPredicted RBP12.12□□□□□ -0.47
RFC1-204ENST00000502706 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
RFC1-204ENST00000502706 KIF3CO14782 793 aa12.1□□□□□ -0.47
RFC1-204ENST00000502706 HAP1P54257 671 aaPredicted RBP12.1□□□□□ -0.47
RFC1-204ENST00000502706 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
RFC1-204ENST00000502706 NUDT7P0C024 238 aa12.08□□□□□ -0.48
RFC1-204ENST00000502706 C2orf72A6NCS6 295 aa12.06□□□□□ -0.48
RFC1-204ENST00000502706 SLC34A2O95436 690 aa12.05□□□□□ -0.48
RFC1-204ENST00000502706 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
RFC1-204ENST00000502706 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
RFC1-204ENST00000502706 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
RFC1-204ENST00000502706 POTEEQ6S8J3 1075 aa12.03□□□□□ -0.48
RFC1-204ENST00000502706 PCDHGA4Q9Y5G9 962 aa12.03□□□□□ -0.48
RFC1-204ENST00000502706 PLA2G2EQ9NZK7 142 aa12.02□□□□□ -0.49
RFC1-204ENST00000502706 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
RFC1-204ENST00000502706 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
RFC1-204ENST00000502706 TMC2Q8TDI7 906 aa11.97□□□□□ -0.49
RFC1-204ENST00000502706 STK25O00506 426 aa11.96□□□□□ -0.49
RFC1-204ENST00000502706 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
RFC1-204ENST00000502706 ARHGAP33O14559 1287 aa11.95□□□□□ -0.5
RFC1-204ENST00000502706 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
RFC1-204ENST00000502706 VSIG10Q8N0Z9 540 aa11.95□□□□□ -0.5
RFC1-204ENST00000502706 NISCHQ9Y2I1 1504 aa11.9□□□□□ -0.5
RFC1-204ENST00000502706 TK2O00142 265 aa11.89□□□□□ -0.51
RFC1-204ENST00000502706 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
RFC1-204ENST00000502706 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
RFC1-204ENST00000502706 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
RFC1-204ENST00000502706 HRO43593 1189 aa11.84□□□□□ -0.51
RFC1-204ENST00000502706 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
RFC1-204ENST00000502706 ECM2O94769 699 aaPredicted RBP11.82□□□□□ -0.52
RFC1-204ENST00000502706 DMRTA1Q5VZB9 504 aa11.82□□□□□ -0.52
RFC1-204ENST00000502706 PSEN2P49810 448 aa11.8□□□□□ -0.52
RFC1-204ENST00000502706 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
RFC1-204ENST00000502706 PPP1R37O75864 691 aa11.78□□□□□ -0.52
RFC1-204ENST00000502706 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.53
RFC1-204ENST00000502706 STAC3Q96MF2 364 aa11.77□□□□□ -0.53
RFC1-204ENST00000502706 FOXK1P85037 733 aa11.76□□□□□ -0.53
RFC1-204ENST00000502706 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
RFC1-204ENST00000502706 RGL2O15211 777 aa11.73□□□□□ -0.53
RFC1-204ENST00000502706 TBC1D12O60347 775 aa11.73□□□□□ -0.53
RFC1-204ENST00000502706 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
RFC1-204ENST00000502706 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.53
RFC1-204ENST00000502706 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
RFC1-204ENST00000502706 PKD2Q13563 968 aa11.68□□□□□ -0.54
RFC1-204ENST00000502706 RGS20O76081 388 aa11.66□□□□□ -0.54
RFC1-204ENST00000502706 DSG2Q14126 1118 aa11.66□□□□□ -0.54
RFC1-204ENST00000502706 VPS9D1Q9Y2B5 631 aa11.66□□□□□ -0.54
RFC1-204ENST00000502706 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
RFC1-204ENST00000502706 PTPN5P54829 565 aa11.64□□□□□ -0.55
RFC1-204ENST00000502706 IFFO2Q5TF58 517 aa11.64□□□□□ -0.55
RFC1-204ENST00000502706 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
RFC1-204ENST00000502706 KDM2AQ9Y2K7 1162 aa11.64□□□□□ -0.55
RFC1-204ENST00000502706 SLC4A5Q9BY07 1137 aa11.62□□□□□ -0.55
RFC1-204ENST00000502706 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
RFC1-204ENST00000502706 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
RFC1-204ENST00000502706 THSD4Q6ZMP0 1018 aa11.57□□□□□ -0.56
RFC1-204ENST00000502706 ZNF454Q8N9F8 522 aa11.57□□□□□ -0.56
RFC1-204ENST00000502706 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
RFC1-204ENST00000502706 ARXQ96QS3 562 aa11.57□□□□□ -0.56
RFC1-204ENST00000502706 TIMELESSQ9UNS1 1208 aa11.57□□□□□ -0.56
RFC1-204ENST00000502706 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
RFC1-204ENST00000502706 BHMG1C9JSJ3 638 aaPredicted RBP11.55□□□□□ -0.56
RFC1-204ENST00000502706 A0A0G2JS52 829 aa11.54□□□□□ -0.56
RFC1-204ENST00000502706 HS6ST3Q8IZP7 471 aa11.54□□□□□ -0.56
RFC1-204ENST00000502706 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
RFC1-204ENST00000502706 TULP1O00294 542 aaPredicted RBP11.53□□□□□ -0.56
RFC1-204ENST00000502706 PTPREP23469 700 aa11.53□□□□□ -0.56
RFC1-204ENST00000502706 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
RFC1-204ENST00000502706 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
RFC1-204ENST00000502706 FOSBP53539 338 aa11.51□□□□□ -0.57
RFC1-204ENST00000502706 WNT2BQ93097 391 aa11.51□□□□□ -0.57
RFC1-204ENST00000502706 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
RFC1-204ENST00000502706 MRPL50Q8N5N7 158 aaKnown RBP11.5□□□□□ -0.57
RFC1-204ENST00000502706 ZBED2Q9BTP6 218 aa11.5□□□□□ -0.57
RFC1-204ENST00000502706 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
RFC1-204ENST00000502706 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
RFC1-204ENST00000502706 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
RFC1-204ENST00000502706 JPH4Q96JJ6 628 aa11.46□□□□□ -0.57
RFC1-204ENST00000502706 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
RFC1-204ENST00000502706 ANO8Q9HCE9 1232 aaPredicted RBP11.44□□□□□ -0.58
RFC1-204ENST00000502706 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms