RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 POGZQ7Z3K3 1410 aa28.09■■■□□ 2.09
UBE2D3-213ENST00000502690 ARID4BQ4LE39 1312 aaPredicted RBP28.09■■■□□ 2.09
UBE2D3-213ENST00000502690 TROQ12816 1431 aaPredicted RBP28.08■■■□□ 2.09
UBE2D3-213ENST00000502690 SCAPERQ9BY12 1400 aa28.08■■■□□ 2.09
UBE2D3-213ENST00000502690 CDC42BPBQ9Y5S2 1711 aa28.04■■■□□ 2.08
UBE2D3-213ENST00000502690 ILDR1Q86SU0 546 aaPredicted RBP28.03■■■□□ 2.08
UBE2D3-213ENST00000502690 MAGI2Q86UL8 1455 aa28.02■■■□□ 2.08
UBE2D3-213ENST00000502690 ARHGAP5Q13017 1502 aa27.99■■■□□ 2.07
UBE2D3-213ENST00000502690 CASKIN1Q8WXD9 1431 aa27.99■■■□□ 2.07
UBE2D3-213ENST00000502690 CDK11AQ9UQ88 783 aaPredicted RBP27.98■■■□□ 2.07
UBE2D3-213ENST00000502690 FER1L4A9Z1Z3 1794 aa27.98■■■□□ 2.07
UBE2D3-213ENST00000502690 PREX2Q70Z35 1606 aa27.96■■■□□ 2.07
UBE2D3-213ENST00000502690 CLIP1P30622 1438 aa27.96■■■□□ 2.07
UBE2D3-213ENST00000502690 LMTK3Q96Q04 1460 aa27.95■■■□□ 2.07
UBE2D3-213ENST00000502690 EFCAB2Q5VUJ9 269 aa27.95■■■□□ 2.06
UBE2D3-213ENST00000502690 KDM5CP41229 1560 aa27.94■■■□□ 2.06
UBE2D3-213ENST00000502690 CCDC18Q5T9S5 1454 aa27.94■■■□□ 2.06
UBE2D3-213ENST00000502690 CDC42BPAQ5VT25 1732 aa27.93■■■□□ 2.06
UBE2D3-213ENST00000502690 ATP10AO60312 1499 aa27.89■■■□□ 2.06
UBE2D3-213ENST00000502690 ZNF518AQ6AHZ1 1483 aa27.89■■■□□ 2.06
UBE2D3-213ENST00000502690 FYCO1Q9BQS8 1478 aa27.89■■■□□ 2.06
UBE2D3-213ENST00000502690 C9orf84Q5VXU9 1444 aa27.89■■■□□ 2.06
UBE2D3-213ENST00000502690 ITSN2Q9NZM3 1697 aa27.88■■■□□ 2.05
UBE2D3-213ENST00000502690 MLECQ14165 292 aa27.88■■■□□ 2.05
UBE2D3-213ENST00000502690 ABCC1P33527 1531 aa27.87■■■□□ 2.05
UBE2D3-213ENST00000502690 ARHGEF12Q9NZN5 1544 aa27.87■■■□□ 2.05
UBE2D3-213ENST00000502690 DIP2CQ9Y2E4 1556 aa27.87■■■□□ 2.05
UBE2D3-213ENST00000502690 ABCA6Q8N139 1617 aa27.87■■■□□ 2.05
UBE2D3-213ENST00000502690 PLPPR3Q6T4P5 718 aa27.86■■■□□ 2.05
UBE2D3-213ENST00000502690 AFAP1Q8N556 730 aa27.86■■■□□ 2.05
UBE2D3-213ENST00000502690 TRAPPC8Q9Y2L5 1435 aa27.81■■■□□ 2.04
UBE2D3-213ENST00000502690 SAMD9LQ8IVG5 1584 aa27.77■■■□□ 2.04
UBE2D3-213ENST00000502690 KIDINS220Q9ULH0 1771 aa27.77■■■□□ 2.04
UBE2D3-213ENST00000502690 REREQ9P2R6 1566 aa27.77■■■□□ 2.04
UBE2D3-213ENST00000502690 HSPA2P54652 639 aa27.76■■■□□ 2.03
UBE2D3-213ENST00000502690 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.03
UBE2D3-213ENST00000502690 PREX1Q8TCU6 1659 aa27.71■■■□□ 2.03
UBE2D3-213ENST00000502690 GPATCH8Q9UKJ3 1502 aaKnown RBP27.71■■■□□ 2.03
UBE2D3-213ENST00000502690 SYCP2Q9BX26 1530 aa27.7■■■□□ 2.02
UBE2D3-213ENST00000502690 MYT1LQ9UL68 1186 aa27.68■■■□□ 2.02
UBE2D3-213ENST00000502690 CEBPAP49715 358 aaPredicted RBP27.67■■■□□ 2.02
UBE2D3-213ENST00000502690 C3P01024 1663 aa27.66■■■□□ 2.02
UBE2D3-213ENST00000502690 AGLP35573 1532 aa27.65■■■□□ 2.02
UBE2D3-213ENST00000502690 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
UBE2D3-213ENST00000502690 TIAM1Q13009 1591 aa27.6■■■□□ 2.01
UBE2D3-213ENST00000502690 INO80Q9ULG1 1556 aaPredicted RBP27.59■■■□□ 2.01
UBE2D3-213ENST00000502690 CEP162Q5TB80 1403 aa27.58■■■□□ 2.01
UBE2D3-213ENST00000502690 SUPT6HQ7KZ85 1726 aaKnown RBP27.58■■■□□ 2.01
UBE2D3-213ENST00000502690 STRCQ7RTU9 1775 aa27.57■■■□□ 2
UBE2D3-213ENST00000502690 HNRNPMP52272 730 aaKnown RBP eCLIP27.56■■■□□ 24e-13■■■■■ 32.7
UBE2D3-213ENST00000502690 MTUS2Q5JR59 1369 aa27.55■■■□□ 2
UBE2D3-213ENST00000502690 ATP7AQ04656 1500 aa27.55■■■□□ 2
UBE2D3-213ENST00000502690 EHBP1L1Q8N3D4 1523 aa27.55■■■□□ 2
UBE2D3-213ENST00000502690 CCNB3Q8WWL7 1395 aa27.54■■■□□ 2
UBE2D3-213ENST00000502690 SETD1BQ9UPS6 1966 aaKnown RBP27.54■■■□□ 2
UBE2D3-213ENST00000502690 FBXO41Q8TF61 875 aa27.53■■■□□ 2
UBE2D3-213ENST00000502690 PLXNC1O60486 1568 aa27.52■■■□□ 2
UBE2D3-213ENST00000502690 CFDP1Q9UEE9 299 aaPredicted RBP27.51■■□□□ 1.99
UBE2D3-213ENST00000502690 KIAA1107Q9UPP5 1409 aa27.5■■□□□ 1.99
UBE2D3-213ENST00000502690 SPAG9O60271 1321 aaKnown RBP27.49■■□□□ 1.99
UBE2D3-213ENST00000502690 PLEKHH2Q8IVE3 1493 aa27.49■■□□□ 1.99
UBE2D3-213ENST00000502690 UHRF1BP1Q6BDS2 1440 aa27.48■■□□□ 1.99
UBE2D3-213ENST00000502690 ZNF644Q9H582 1327 aaPredicted RBP27.47■■□□□ 1.99
UBE2D3-213ENST00000502690 MROH2AA6NES4 1674 aa27.47■■□□□ 1.99
UBE2D3-213ENST00000502690 CLTCQ00610 1675 aaKnown RBP27.45■■□□□ 1.98
UBE2D3-213ENST00000502690 MBD5Q9P267 1494 aa27.43■■□□□ 1.98
UBE2D3-213ENST00000502690 ADGBQ8N7X0 1667 aa27.43■■□□□ 1.98
UBE2D3-213ENST00000502690 A2MP01023 1474 aa27.42■■□□□ 1.98
UBE2D3-213ENST00000502690 CNTLNQ9NXG0 1405 aa27.41■■□□□ 1.98
UBE2D3-213ENST00000502690 NCOA2Q15596 1464 aa27.38■■□□□ 1.97
UBE2D3-213ENST00000502690 ESF1Q9H501 851 aaKnown RBP27.37■■□□□ 1.97
UBE2D3-213ENST00000502690 CAMSAP2Q08AD1 1489 aa27.33■■□□□ 1.97
UBE2D3-213ENST00000502690 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
UBE2D3-213ENST00000502690 CERKQ8TCT0 537 aa27.32■■□□□ 1.96
UBE2D3-213ENST00000502690 ZMYM3Q14202 1370 aa27.32■■□□□ 1.96
UBE2D3-213ENST00000502690 MYO3AQ8NEV4 1616 aa27.31■■□□□ 1.96
UBE2D3-213ENST00000502690 NPATQ14207 1427 aa27.3■■□□□ 1.96
UBE2D3-213ENST00000502690 ZNF142P52746 1687 aaPredicted RBP27.28■■□□□ 1.96
UBE2D3-213ENST00000502690 VPS8Q8N3P4 1428 aa27.28■■□□□ 1.96
UBE2D3-213ENST00000502690 CCDC141Q6ZP82 1450 aa27.27■■□□□ 1.96
UBE2D3-213ENST00000502690 NCOA1Q15788 1441 aa27.27■■□□□ 1.96
UBE2D3-213ENST00000502690 CAMSAP1Q5T5Y3 1602 aa27.27■■□□□ 1.96
UBE2D3-213ENST00000502690 RTEL1-TNFRSF6BF6WH68 1400 aa27.26■■□□□ 1.95
UBE2D3-213ENST00000502690 PTPRKQ15262 1439 aa27.25■■□□□ 1.95
UBE2D3-213ENST00000502690 GGT6Q6P531 493 aa27.25■■□□□ 1.95
UBE2D3-213ENST00000502690 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
UBE2D3-213ENST00000502690 PTPRTO14522 1441 aa27.24■■□□□ 1.95
UBE2D3-213ENST00000502690 ARHGEF5Q12774 1597 aa27.22■■□□□ 1.95
UBE2D3-213ENST00000502690 CEP170BQ9Y4F5 1589 aaPredicted RBP27.21■■□□□ 1.95
UBE2D3-213ENST00000502690 DMRT2Q9Y5R5 561 aa27.2■■□□□ 1.94
UBE2D3-213ENST00000502690 DHX29Q7Z478 1369 aaKnown RBP27.2■■□□□ 1.94
UBE2D3-213ENST00000502690 LTBP4Q8N2S1 1624 aa27.19■■□□□ 1.94
UBE2D3-213ENST00000502690 KANK4Q5T7N3 995 aaPredicted RBP27.15■■□□□ 1.94
UBE2D3-213ENST00000502690 MAP3K1Q13233 1512 aa27.12■■□□□ 1.93
UBE2D3-213ENST00000502690 KDM5DQ9BY66 1539 aa27.11■■□□□ 1.93
UBE2D3-213ENST00000502690 NCKAP5LQ9HCH0 1330 aa27.11■■□□□ 1.93
UBE2D3-213ENST00000502690 DNMT1P26358 1616 aaKnown RBP27.1■■□□□ 1.93
UBE2D3-213ENST00000502690 KIF3BO15066 747 aa27.1■■□□□ 1.93
UBE2D3-213ENST00000502690 MAST1Q9Y2H9 1570 aa27.09■■□□□ 1.93
UBE2D3-213ENST00000502690 PPP6R1Q9UPN7 881 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms