RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 PLCH2O75038 1416 aa20.32■□□□□ 0.84
SGCA-203ENST00000502555 MYO5CQ9NQX4 1742 aa20.31■□□□□ 0.84
SGCA-203ENST00000502555 ITGAEP38570 1179 aa20.3■□□□□ 0.84
SGCA-203ENST00000502555 ARHGAP5Q13017 1502 aa20.3■□□□□ 0.84
SGCA-203ENST00000502555 ZNF644Q9H582 1327 aaPredicted RBP20.28■□□□□ 0.84
SGCA-203ENST00000502555 CDC42BPBQ9Y5S2 1711 aa20.28■□□□□ 0.84
SGCA-203ENST00000502555 DNMT1P26358 1616 aaKnown RBP20.27■□□□□ 0.84
SGCA-203ENST00000502555 PLEKHH2Q8IVE3 1493 aa20.27■□□□□ 0.84
SGCA-203ENST00000502555 DAPK1P53355 1430 aa20.26■□□□□ 0.83
SGCA-203ENST00000502555 ZNF777Q9ULD5 760 aaPredicted RBP20.26■□□□□ 0.83
SGCA-203ENST00000502555 PTPRKQ15262 1439 aa20.25■□□□□ 0.83
SGCA-203ENST00000502555 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
SGCA-203ENST00000502555 ABCC5O15440 1437 aa20.24■□□□□ 0.83
SGCA-203ENST00000502555 EFCAB2Q5VUJ9 269 aa20.24■□□□□ 0.83
SGCA-203ENST00000502555 AKNAQ7Z591 1439 aa20.23■□□□□ 0.83
SGCA-203ENST00000502555 KIAA1107Q9UPP5 1409 aa20.23■□□□□ 0.83
SGCA-203ENST00000502555 ARHGEF5Q12774 1597 aa20.22■□□□□ 0.83
SGCA-203ENST00000502555 GLI2P10070 1586 aa20.21■□□□□ 0.83
SGCA-203ENST00000502555 HFM1A2PYH4 1435 aa20.21■□□□□ 0.83
SGCA-203ENST00000502555 SHANK2Q9UPX8 1470 aa20.2■□□□□ 0.82
SGCA-203ENST00000502555 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
SGCA-203ENST00000502555 SETD5Q9C0A6 1442 aa20.2■□□□□ 0.82
SGCA-203ENST00000502555 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
SGCA-203ENST00000502555 MBD5Q9P267 1494 aa20.2■□□□□ 0.82
SGCA-203ENST00000502555 CD109Q6YHK3 1445 aa20.19■□□□□ 0.82
SGCA-203ENST00000502555 FANCAO15360 1455 aa20.18■□□□□ 0.82
SGCA-203ENST00000502555 CCDC141Q6ZP82 1450 aa20.18■□□□□ 0.82
SGCA-203ENST00000502555 ABCC1P33527 1531 aa20.18■□□□□ 0.82
SGCA-203ENST00000502555 CROCC2H7BZ55 1655 aa20.17■□□□□ 0.82
SGCA-203ENST00000502555 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
SGCA-203ENST00000502555 ADGRL2O95490 1459 aa20.15■□□□□ 0.82
SGCA-203ENST00000502555 DIP2BQ9P265 1576 aa20.15■□□□□ 0.82
SGCA-203ENST00000502555 HRCP23327 699 aa20.15■□□□□ 0.82
SGCA-203ENST00000502555 CFAP74Q9C0B2 1584 aa20.14■□□□□ 0.82
SGCA-203ENST00000502555 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.81
SGCA-203ENST00000502555 NAIPQ13075 1403 aa20.14■□□□□ 0.81
SGCA-203ENST00000502555 HNRNPMP52272 730 aaKnown RBP eCLIP20.13■□□□□ 0.81
SGCA-203ENST00000502555 MAP3K4Q9Y6R4 1608 aa20.13■□□□□ 0.81
SGCA-203ENST00000502555 C9orf84Q5VXU9 1444 aa20.12■□□□□ 0.81
SGCA-203ENST00000502555 ARHGEF12Q9NZN5 1544 aa20.11■□□□□ 0.81
SGCA-203ENST00000502555 CHIC2Q9UKJ5 165 aa20.11■□□□□ 0.81
SGCA-203ENST00000502555 GCC2Q8IWJ2 1684 aa20.11■□□□□ 0.81
SGCA-203ENST00000502555 ADGBQ8N7X0 1667 aa20.11■□□□□ 0.81
SGCA-203ENST00000502555 ANKRD30AQ9BXX3 1397 aa20.1■□□□□ 0.81
SGCA-203ENST00000502555 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
SGCA-203ENST00000502555 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
SGCA-203ENST00000502555 MAST1Q9Y2H9 1570 aa20.1■□□□□ 0.81
SGCA-203ENST00000502555 NEO1Q92859 1461 aa20.1■□□□□ 0.81
SGCA-203ENST00000502555 ADGRL1O94910 1474 aa20.09■□□□□ 0.81
SGCA-203ENST00000502555 NCOA1Q15788 1441 aa20.09■□□□□ 0.81
SGCA-203ENST00000502555 FAM69CQ0P6D2 419 aa20.07■□□□□ 0.8
SGCA-203ENST00000502555 RRP7BPQ9NSQ0 103 aa20.06■□□□□ 0.8
SGCA-203ENST00000502555 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
SGCA-203ENST00000502555 CCER1Q8TC90 406 aaPredicted RBP20.05■□□□□ 0.8
SGCA-203ENST00000502555 TRAPPC8Q9Y2L5 1435 aa20.05■□□□□ 0.8
SGCA-203ENST00000502555 SCAPERQ9BY12 1400 aa20.04■□□□□ 0.8
SGCA-203ENST00000502555 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
SGCA-203ENST00000502555 TEX14Q8IWB6 1497 aa20.01■□□□□ 0.79
SGCA-203ENST00000502555 PLXNC1O60486 1568 aa20.01■□□□□ 0.79
SGCA-203ENST00000502555 DHX57Q6P158 1386 aaKnown RBP20■□□□□ 0.79
SGCA-203ENST00000502555 ZNF518AQ6AHZ1 1483 aa20■□□□□ 0.79
SGCA-203ENST00000502555 KIF15Q9NS87 1388 aa20■□□□□ 0.79
SGCA-203ENST00000502555 POGZQ7Z3K3 1410 aa19.99■□□□□ 0.79
SGCA-203ENST00000502555 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
SGCA-203ENST00000502555 ZFYVE16Q7Z3T8 1539 aa19.98■□□□□ 0.79
SGCA-203ENST00000502555 ANKRD50Q9ULJ7 1429 aa19.97■□□□□ 0.79
SGCA-203ENST00000502555 CLSPNQ9HAW4 1339 aa19.96■□□□□ 0.79
SGCA-203ENST00000502555 KIF13AQ9H1H9 1805 aa19.96■□□□□ 0.79
SGCA-203ENST00000502555 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
SGCA-203ENST00000502555 AFAP1Q8N556 730 aa19.96■□□□□ 0.79
SGCA-203ENST00000502555 INO80Q9ULG1 1556 aaPredicted RBP19.96■□□□□ 0.79
SGCA-203ENST00000502555 DENND4BO75064 1496 aaPredicted RBP19.95■□□□□ 0.78
SGCA-203ENST00000502555 KDM5CP41229 1560 aa19.95■□□□□ 0.78
SGCA-203ENST00000502555 KDM6BO15054 1643 aa19.95■□□□□ 0.78
SGCA-203ENST00000502555 PPRC1Q5VV67 1664 aaKnown RBP19.94■□□□□ 0.78
SGCA-203ENST00000502555 ATP7AQ04656 1500 aa19.94■□□□□ 0.78
SGCA-203ENST00000502555 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
SGCA-203ENST00000502555 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
SGCA-203ENST00000502555 MLH3Q9UHC1 1453 aa19.9■□□□□ 0.78
SGCA-203ENST00000502555 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
SGCA-203ENST00000502555 TSPOAP1O95153 1857 aa19.85■□□□□ 0.77
SGCA-203ENST00000502555 TRIM52Q96A61 297 aa19.85■□□□□ 0.77
SGCA-203ENST00000502555 RICTORQ6R327 1708 aa19.85■□□□□ 0.77
SGCA-203ENST00000502555 KIDINS220Q9ULH0 1771 aa19.84■□□□□ 0.77
SGCA-203ENST00000502555 ZMYM4Q5VZL5 1548 aa19.84■□□□□ 0.77
SGCA-203ENST00000502555 KDM5DQ9BY66 1539 aa19.84■□□□□ 0.77
SGCA-203ENST00000502555 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.77
SGCA-203ENST00000502555 RAPGEF3O95398 923 aa19.82■□□□□ 0.76
SGCA-203ENST00000502555 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
SGCA-203ENST00000502555 DHX29Q7Z478 1369 aaKnown RBP19.81■□□□□ 0.76
SGCA-203ENST00000502555 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
SGCA-203ENST00000502555 UNC13BO14795 1591 aa19.8■□□□□ 0.76
SGCA-203ENST00000502555 PZPP20742 1482 aa19.8■□□□□ 0.76
SGCA-203ENST00000502555 EIF2AK4Q9P2K8 1649 aaKnown RBP19.79■□□□□ 0.76
SGCA-203ENST00000502555 MPHOSPH9Q99550 1183 aa19.78■□□□□ 0.76
SGCA-203ENST00000502555 A2MP01023 1474 aa19.78■□□□□ 0.76
SGCA-203ENST00000502555 NUP155O75694 1391 aa19.77■□□□□ 0.76
SGCA-203ENST00000502555 ABCA6Q8N139 1617 aa19.76■□□□□ 0.75
SGCA-203ENST00000502555 DIP2CQ9Y2E4 1556 aa19.75■□□□□ 0.75
SGCA-203ENST00000502555 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms