RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 ZNF316A6NFI3 1004 aaPredicted RBP7.38□□□□□ -1.23
SCLT1-203ENST00000502495 ARSIQ5FYB1 569 aa7.38□□□□□ -1.23
SCLT1-203ENST00000502495 TRIM41Q8WV44 630 aa7.38□□□□□ -1.23
SCLT1-203ENST00000502495 PLA2G2EQ9NZK7 142 aa7.38□□□□□ -1.23
SCLT1-203ENST00000502495 SOX12O15370 315 aa7.37□□□□□ -1.23
SCLT1-203ENST00000502495 PBX2P40425 430 aa7.36□□□□□ -1.23
SCLT1-203ENST00000502495 HCSTQ9UBK5 93 aa7.36□□□□□ -1.23
SCLT1-203ENST00000502495 IFNLR1Q8IU57 520 aaPredicted RBP7.32□□□□□ -1.24
SCLT1-203ENST00000502495 KHSRPQ92945 711 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCLT1-203ENST00000502495 MS4A4AQ96JQ5 239 aa7.28□□□□□ -1.24
SCLT1-203ENST00000502495 PHF8Q9UPP1 1060 aa7.27□□□□□ -1.25
SCLT1-203ENST00000502495 RIOK3O14730 519 aaKnown RBP7.24□□□□□ -1.25
SCLT1-203ENST00000502495 NLRP6P59044 892 aa7.24□□□□□ -1.25
SCLT1-203ENST00000502495 NUDT7P0C024 238 aa7.24□□□□□ -1.25
SCLT1-203ENST00000502495 VGFO15240 615 aaPredicted RBP7.23□□□□□ -1.25
SCLT1-203ENST00000502495 LHX6Q9UPM6 363 aa7.23□□□□□ -1.25
SCLT1-203ENST00000502495 ADGRD1Q6QNK2 874 aa7.22□□□□□ -1.25
SCLT1-203ENST00000502495 AXIN2Q9Y2T1 843 aa7.22□□□□□ -1.25
SCLT1-203ENST00000502495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.22□□□□□ -1.25
SCLT1-203ENST00000502495 PSDA5PKW4 1024 aaPredicted RBP7.22□□□□□ -1.25
SCLT1-203ENST00000502495 ZFP91Q96JP5 570 aaPredicted RBP7.22□□□□□ -1.25
SCLT1-203ENST00000502495 ARHGAP33O14559 1287 aa7.21□□□□□ -1.26
SCLT1-203ENST00000502495 RGS20O76081 388 aa7.2□□□□□ -1.26
SCLT1-203ENST00000502495 POTEEQ6S8J3 1075 aa7.2□□□□□ -1.26
SCLT1-203ENST00000502495 PCDHGA4Q9Y5G9 962 aa7.2□□□□□ -1.26
SCLT1-203ENST00000502495 TK2O00142 265 aa7.2□□□□□ -1.26
SCLT1-203ENST00000502495 SLC34A2O95436 690 aa7.2□□□□□ -1.26
SCLT1-203ENST00000502495 STAC3Q96MF2 364 aa7.19□□□□□ -1.26
SCLT1-203ENST00000502495 C2orf72A6NCS6 295 aa7.17□□□□□ -1.26
SCLT1-203ENST00000502495 KIF3CO14782 793 aa7.17□□□□□ -1.26
SCLT1-203ENST00000502495 TAOK2Q9UL54 1235 aa7.17□□□□□ -1.26
SCLT1-203ENST00000502495 FBXO22Q8NEZ5 403 aa7.15□□□□□ -1.26
SCLT1-203ENST00000502495 PKD2Q13563 968 aa7.15□□□□□ -1.27
SCLT1-203ENST00000502495 TMC2Q8TDI7 906 aa7.14□□□□□ -1.27
SCLT1-203ENST00000502495 KCTD12Q96CX2 325 aaKnown RBP7.14□□□□□ -1.27
SCLT1-203ENST00000502495 IRX2Q9BZI1 471 aaPredicted RBP7.14□□□□□ -1.27
SCLT1-203ENST00000502495 HRO43593 1189 aa7.13□□□□□ -1.27
SCLT1-203ENST00000502495 RNF25Q96BH1 459 aaPredicted RBP7.13□□□□□ -1.27
SCLT1-203ENST00000502495 DCAF8L2P0C7V8 631 aa7.13□□□□□ -1.27
SCLT1-203ENST00000502495 SLC24A1O60721 1099 aa7.11□□□□□ -1.27
SCLT1-203ENST00000502495 IFFO2Q5TF58 517 aa7.11□□□□□ -1.27
SCLT1-203ENST00000502495 KCNH8Q96L42 1107 aa7.11□□□□□ -1.27
SCLT1-203ENST00000502495 DMRTA1Q5VZB9 504 aa7.1□□□□□ -1.27
SCLT1-203ENST00000502495 BCL11BQ9C0K0 894 aaPredicted RBP7.1□□□□□ -1.27
SCLT1-203ENST00000502495 ECM2O94769 699 aaPredicted RBP7.09□□□□□ -1.27
SCLT1-203ENST00000502495 PPP4R3BQ5MIZ7 849 aa7.09□□□□□ -1.27
SCLT1-203ENST00000502495 PSEN2P49810 448 aa7.08□□□□□ -1.28
SCLT1-203ENST00000502495 STK24Q9Y6E0 443 aa7.08□□□□□ -1.28
SCLT1-203ENST00000502495 MFRPQ9BY79 579 aa7.08□□□□□ -1.28
SCLT1-203ENST00000502495 PTPN5P54829 565 aa7.06□□□□□ -1.28
SCLT1-203ENST00000502495 PTCD2Q8WV60 388 aaKnown RBP7.05□□□□□ -1.28
SCLT1-203ENST00000502495 A0A0G2JS52 829 aa7.04□□□□□ -1.28
SCLT1-203ENST00000502495 KDM4FA0A1W2PPD8 638 aa7.04□□□□□ -1.28
SCLT1-203ENST00000502495 TBC1D12O60347 775 aa7.04□□□□□ -1.28
SCLT1-203ENST00000502495 STK25O00506 426 aa7.01□□□□□ -1.29
SCLT1-203ENST00000502495 KCNK17Q96T54 332 aa7.01□□□□□ -1.29
SCLT1-203ENST00000502495 RGL2O15211 777 aa7.01□□□□□ -1.29
SCLT1-203ENST00000502495 VPS9D1Q9Y2B5 631 aa7.01□□□□□ -1.29
SCLT1-203ENST00000502495 GOLGA8CPA6NN73 597 aa7□□□□□ -1.29
SCLT1-203ENST00000502495 THSD4Q6ZMP0 1018 aa6.99□□□□□ -1.29
SCLT1-203ENST00000502495 SLC4A5Q9BY07 1137 aa6.99□□□□□ -1.29
SCLT1-203ENST00000502495 FOXK1P85037 733 aa6.97□□□□□ -1.29
SCLT1-203ENST00000502495 PLPP6Q8IY26 295 aa6.97□□□□□ -1.29
SCLT1-203ENST00000502495 PLCB2Q00722 1185 aa6.95□□□□□ -1.3
SCLT1-203ENST00000502495 Q6ZNB5 142 aa6.95□□□□□ -1.3
SCLT1-203ENST00000502495 WNT2BQ93097 391 aa6.95□□□□□ -1.3
SCLT1-203ENST00000502495 MRPL50Q8N5N7 158 aaKnown RBP6.94□□□□□ -1.3
SCLT1-203ENST00000502495 BHMG1C9JSJ3 638 aaPredicted RBP6.92□□□□□ -1.3
SCLT1-203ENST00000502495 BCL2L12Q9HB09 334 aa6.92□□□□□ -1.3
SCLT1-203ENST00000502495 GPHNQ9NQX3 736 aaPredicted RBP6.92□□□□□ -1.3
SCLT1-203ENST00000502495 PTPREP23469 700 aa6.91□□□□□ -1.3
SCLT1-203ENST00000502495 ZNF454Q8N9F8 522 aa6.91□□□□□ -1.3
SCLT1-203ENST00000502495 BBXQ8WY36 941 aaPredicted RBP6.91□□□□□ -1.3
SCLT1-203ENST00000502495 NBPF3Q9H094 633 aa6.91□□□□□ -1.3
SCLT1-203ENST00000502495 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.91□□□□□ -1.3
SCLT1-203ENST00000502495 PPP1R37O75864 691 aa6.9□□□□□ -1.3
SCLT1-203ENST00000502495 CHGAP10645 457 aaKnown RBP6.9□□□□□ -1.3
SCLT1-203ENST00000502495 LAPTM4AQ15012 233 aa6.9□□□□□ -1.31
SCLT1-203ENST00000502495 HAP1P54257 671 aaPredicted RBP6.88□□□□□ -1.31
SCLT1-203ENST00000502495 DSG2Q14126 1118 aa6.88□□□□□ -1.31
SCLT1-203ENST00000502495 ZBED2Q9BTP6 218 aa6.88□□□□□ -1.31
SCLT1-203ENST00000502495 ITGBL1O95965 494 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-203ENST00000502495 PAXIP1Q6ZW49 1069 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-203ENST00000502495 OXER1Q8TDS5 423 aa6.86□□□□□ -1.31
SCLT1-203ENST00000502495 CFAP44Q96MT7 982 aa6.86□□□□□ -1.31
SCLT1-203ENST00000502495 FOSBP53539 338 aa6.85□□□□□ -1.31
SCLT1-203ENST00000502495 ANKK1Q8NFD2 765 aa6.85□□□□□ -1.31
SCLT1-203ENST00000502495 NYAP1Q6ZVC0 841 aa6.84□□□□□ -1.31
SCLT1-203ENST00000502495 HS6ST3Q8IZP7 471 aa6.83□□□□□ -1.32
SCLT1-203ENST00000502495 UPF1Q92900 1129 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCLT1-203ENST00000502495 SPRYD3Q8NCJ5 442 aa6.82□□□□□ -1.32
SCLT1-203ENST00000502495 JPH4Q96JJ6 628 aa6.82□□□□□ -1.32
SCLT1-203ENST00000502495 KCNC4Q03721 635 aa6.81□□□□□ -1.32
SCLT1-203ENST00000502495 ZDHHC16Q969W1 377 aa6.81□□□□□ -1.32
SCLT1-203ENST00000502495 TRAF7Q6Q0C0 670 aa6.8□□□□□ -1.32
SCLT1-203ENST00000502495 ANO8Q9HCE9 1232 aaPredicted RBP6.79□□□□□ -1.32
SCLT1-203ENST00000502495 RABGEF1Q9UJ41 708 aa6.79□□□□□ -1.32
SCLT1-203ENST00000502495 LAPTM4BQ86VI4 370 aa6.78□□□□□ -1.32
SCLT1-203ENST00000502495 GFRA3O60609 400 aa6.78□□□□□ -1.32
SCLT1-203ENST00000502495 ADAM33Q9BZ11 813 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms