RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
NFKB1-203ENST00000502367 KIF3CO14782 793 aa12.98□□□□□ -0.33
NFKB1-203ENST00000502367 ST18O60284 1047 aa12.98□□□□□ -0.33
NFKB1-203ENST00000502367 HOXB3P14651 431 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-203ENST00000502367 SPRYD3Q8NCJ5 442 aa12.98□□□□□ -0.33
NFKB1-203ENST00000502367 RYDENQ9NUL5 291 aaKnown RBP12.98□□□□□ -0.33
NFKB1-203ENST00000502367 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-203ENST00000502367 TMC2Q8TDI7 906 aa12.93□□□□□ -0.34
NFKB1-203ENST00000502367 NCKAP5LQ9HCH0 1330 aa12.92□□□□□ -0.34
NFKB1-203ENST00000502367 MARVELD3Q96A59 401 aa12.9□□□□□ -0.34
NFKB1-203ENST00000502367 DSG2Q14126 1118 aa12.89□□□□□ -0.35
NFKB1-203ENST00000502367 SNPHO15079 494 aa12.88□□□□□ -0.35
NFKB1-203ENST00000502367 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-203ENST00000502367 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.35
NFKB1-203ENST00000502367 CRISPLD2Q9H0B8 497 aa12.86□□□□□ -0.35
NFKB1-203ENST00000502367 POTEMA6NI47 508 aa12.85□□□□□ -0.35
NFKB1-203ENST00000502367 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
NFKB1-203ENST00000502367 PLPP6Q8IY26 295 aa12.85□□□□□ -0.35
NFKB1-203ENST00000502367 LARP6Q9BRS8 491 aaKnown RBP12.85□□□□□ -0.35
NFKB1-203ENST00000502367 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
NFKB1-203ENST00000502367 FOXK1P85037 733 aa12.82□□□□□ -0.36
NFKB1-203ENST00000502367 DOK7Q18PE1 504 aa12.82□□□□□ -0.36
NFKB1-203ENST00000502367 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
NFKB1-203ENST00000502367 ARSIQ5FYB1 569 aa12.81□□□□□ -0.36
NFKB1-203ENST00000502367 PDE4AP27815 886 aa12.8□□□□□ -0.36
NFKB1-203ENST00000502367 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
NFKB1-203ENST00000502367 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
NFKB1-203ENST00000502367 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
NFKB1-203ENST00000502367 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
NFKB1-203ENST00000502367 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-203ENST00000502367 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
NFKB1-203ENST00000502367 EMP3P54852 163 aa12.73□□□□□ -0.37
NFKB1-203ENST00000502367 DDX27Q96GQ7 796 aaKnown RBP12.73□□□□□ -0.37
NFKB1-203ENST00000502367 PCDHGA4Q9Y5G9 962 aa12.73□□□□□ -0.37
NFKB1-203ENST00000502367 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
NFKB1-203ENST00000502367 RIMBP2O15034 1052 aa12.71□□□□□ -0.37
NFKB1-203ENST00000502367 NUDT7P0C024 238 aa12.71□□□□□ -0.37
NFKB1-203ENST00000502367 PLCB2Q00722 1185 aa12.71□□□□□ -0.37
NFKB1-203ENST00000502367 MFSD10Q14728 455 aa12.7□□□□□ -0.38
NFKB1-203ENST00000502367 SLC34A2O95436 690 aa12.68□□□□□ -0.38
NFKB1-203ENST00000502367 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
NFKB1-203ENST00000502367 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
NFKB1-203ENST00000502367 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
NFKB1-203ENST00000502367 PTCD2Q8WV60 388 aaKnown RBP12.65□□□□□ -0.38
NFKB1-203ENST00000502367 ERBB3P21860 1342 aa12.63□□□□□ -0.39
NFKB1-203ENST00000502367 OXER1Q8TDS5 423 aa12.63□□□□□ -0.39
NFKB1-203ENST00000502367 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
NFKB1-203ENST00000502367 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
NFKB1-203ENST00000502367 LHX6Q9UPM6 363 aa12.62□□□□□ -0.39
NFKB1-203ENST00000502367 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
NFKB1-203ENST00000502367 HAP1P54257 671 aaPredicted RBP12.6□□□□□ -0.39
NFKB1-203ENST00000502367 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
NFKB1-203ENST00000502367 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
NFKB1-203ENST00000502367 WDR70Q9NW82 654 aa12.55□□□□□ -0.4
NFKB1-203ENST00000502367 DPYSL4O14531 572 aa12.54□□□□□ -0.4
NFKB1-203ENST00000502367 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
NFKB1-203ENST00000502367 TBC1D12O60347 775 aa12.53□□□□□ -0.4
NFKB1-203ENST00000502367 EVI5O60447 810 aa12.51□□□□□ -0.41
NFKB1-203ENST00000502367 E2F4Q16254 413 aa12.5□□□□□ -0.41
NFKB1-203ENST00000502367 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
NFKB1-203ENST00000502367 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
NFKB1-203ENST00000502367 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
NFKB1-203ENST00000502367 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
NFKB1-203ENST00000502367 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
NFKB1-203ENST00000502367 ZNF687Q8N1G0 1237 aa12.45□□□□□ -0.42
NFKB1-203ENST00000502367 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
NFKB1-203ENST00000502367 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
NFKB1-203ENST00000502367 KCNV2Q8TDN2 545 aa12.42□□□□□ -0.42
NFKB1-203ENST00000502367 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
NFKB1-203ENST00000502367 DDX12PQ92771 950 aa12.39□□□□□ -0.43
NFKB1-203ENST00000502367 PSEN2P49810 448 aa12.38□□□□□ -0.43
NFKB1-203ENST00000502367 FOSBP53539 338 aa12.37□□□□□ -0.43
NFKB1-203ENST00000502367 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
NFKB1-203ENST00000502367 PCDHGA10Q9Y5H3 936 aa12.36□□□□□ -0.43
NFKB1-203ENST00000502367 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
NFKB1-203ENST00000502367 ADAM33Q9BZ11 813 aa12.34□□□□□ -0.43
NFKB1-203ENST00000502367 PDIA6Q15084 440 aa12.33□□□□□ -0.44
NFKB1-203ENST00000502367 DMRTA1Q5VZB9 504 aa12.33□□□□□ -0.44
NFKB1-203ENST00000502367 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
NFKB1-203ENST00000502367 JPH4Q96JJ6 628 aa12.31□□□□□ -0.44
NFKB1-203ENST00000502367 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
NFKB1-203ENST00000502367 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
NFKB1-203ENST00000502367 KCNK17Q96T54 332 aa12.3□□□□□ -0.44
NFKB1-203ENST00000502367 ARIH1Q9Y4X5 557 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-203ENST00000502367 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-203ENST00000502367 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
NFKB1-203ENST00000502367 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
NFKB1-203ENST00000502367 RBM33Q96EV2 1170 aaKnown RBP12.29□□□□□ -0.44
NFKB1-203ENST00000502367 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
NFKB1-203ENST00000502367 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.44
NFKB1-203ENST00000502367 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
NFKB1-203ENST00000502367 MLLT3P42568 568 aaPredicted RBP12.26□□□□□ -0.45
NFKB1-203ENST00000502367 PHF14O94880 888 aa12.25□□□□□ -0.45
NFKB1-203ENST00000502367 PTGER2P43116 358 aa12.25□□□□□ -0.45
NFKB1-203ENST00000502367 VSIG10Q8N0Z9 540 aa12.25□□□□□ -0.45
NFKB1-203ENST00000502367 ARHGEF1Q92888 912 aaKnown RBP12.25□□□□□ -0.45
NFKB1-203ENST00000502367 NBR1Q14596 966 aa12.24□□□□□ -0.45
NFKB1-203ENST00000502367 BCL2L12Q9HB09 334 aa12.24□□□□□ -0.45
NFKB1-203ENST00000502367 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
NFKB1-203ENST00000502367 SEMA3EO15041 775 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms