RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 C2orf72A6NCS6 295 aa6.73□□□□□ -1.33
SMAD1-203ENST00000502342 CADPS2Q86UW7 1296 aa6.73□□□□□ -1.33
SMAD1-203ENST00000502342 TMC2Q8TDI7 906 aa6.72□□□□□ -1.33
SMAD1-203ENST00000502342 TSHZ2Q9NRE2 1034 aa6.71□□□□□ -1.34
SMAD1-203ENST00000502342 PDE4AP27815 886 aa6.69□□□□□ -1.34
SMAD1-203ENST00000502342 LARP6Q9BRS8 491 aaKnown RBP6.69□□□□□ -1.34
SMAD1-203ENST00000502342 KIF3CO14782 793 aa6.68□□□□□ -1.34
SMAD1-203ENST00000502342 SNPHO15079 494 aa6.67□□□□□ -1.34
SMAD1-203ENST00000502342 PLCB2Q00722 1185 aa6.67□□□□□ -1.34
SMAD1-203ENST00000502342 DSG2Q14126 1118 aa6.67□□□□□ -1.34
SMAD1-203ENST00000502342 GPHNQ9NQX3 736 aaPredicted RBP6.67□□□□□ -1.34
SMAD1-203ENST00000502342 NCKAP5LQ9HCH0 1330 aa6.67□□□□□ -1.34
SMAD1-203ENST00000502342 PLPP6Q8IY26 295 aa6.66□□□□□ -1.34
SMAD1-203ENST00000502342 ST18O60284 1047 aa6.65□□□□□ -1.34
SMAD1-203ENST00000502342 HOXB3P14651 431 aaPredicted RBP6.65□□□□□ -1.34
SMAD1-203ENST00000502342 HAP1P54257 671 aaPredicted RBP6.65□□□□□ -1.34
SMAD1-203ENST00000502342 ZNF710Q8N1W2 664 aa6.65□□□□□ -1.34
SMAD1-203ENST00000502342 CRISPLD2Q9H0B8 497 aa6.65□□□□□ -1.34
SMAD1-203ENST00000502342 FOXK1P85037 733 aa6.63□□□□□ -1.35
SMAD1-203ENST00000502342 DOK7Q18PE1 504 aa6.63□□□□□ -1.35
SMAD1-203ENST00000502342 ARSIQ5FYB1 569 aa6.62□□□□□ -1.35
SMAD1-203ENST00000502342 PPP1R15BQ5SWA1 713 aa6.62□□□□□ -1.35
SMAD1-203ENST00000502342 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
SMAD1-203ENST00000502342 KHSRPQ92945 711 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMAD1-203ENST00000502342 MARVELD3Q96A59 401 aa6.62□□□□□ -1.35
SMAD1-203ENST00000502342 DDX27Q96GQ7 796 aaKnown RBP6.62□□□□□ -1.35
SMAD1-203ENST00000502342 UPF1Q92900 1129 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMAD1-203ENST00000502342 WDR70Q9NW82 654 aa6.6□□□□□ -1.35
SMAD1-203ENST00000502342 RIMBP2O15034 1052 aa6.59□□□□□ -1.35
SMAD1-203ENST00000502342 GPR153Q6NV75 609 aa6.58□□□□□ -1.36
SMAD1-203ENST00000502342 MFSD10Q14728 455 aa6.57□□□□□ -1.36
SMAD1-203ENST00000502342 POTEGQ6S5H5 508 aa6.57□□□□□ -1.36
SMAD1-203ENST00000502342 PCDHGA4Q9Y5G9 962 aa6.57□□□□□ -1.36
SMAD1-203ENST00000502342 FAM205CA6NFA0 338 aa6.56□□□□□ -1.36
SMAD1-203ENST00000502342 POTEMA6NI47 508 aa6.56□□□□□ -1.36
SMAD1-203ENST00000502342 NUDT7P0C024 238 aa6.56□□□□□ -1.36
SMAD1-203ENST00000502342 HOXB1P14653 301 aaPredicted RBP6.56□□□□□ -1.36
SMAD1-203ENST00000502342 SLC34A2O95436 690 aa6.55□□□□□ -1.36
SMAD1-203ENST00000502342 EMP3P54852 163 aa6.55□□□□□ -1.36
SMAD1-203ENST00000502342 MAP3K9P80192 1104 aa6.55□□□□□ -1.36
SMAD1-203ENST00000502342 EMILIN3Q9NT22 766 aa6.55□□□□□ -1.36
SMAD1-203ENST00000502342 TBC1D12O60347 775 aa6.54□□□□□ -1.36
SMAD1-203ENST00000502342 PTCD2Q8WV60 388 aaKnown RBP6.54□□□□□ -1.36
SMAD1-203ENST00000502342 POTEB3A0JP26 581 aa6.53□□□□□ -1.36
SMAD1-203ENST00000502342 POTEBQ6S5H4 581 aa6.53□□□□□ -1.36
SMAD1-203ENST00000502342 OXER1Q8TDS5 423 aa6.53□□□□□ -1.36
SMAD1-203ENST00000502342 ZSWIM6Q9HCJ5 1215 aa6.53□□□□□ -1.36
SMAD1-203ENST00000502342 KDM2AQ9Y2K7 1162 aa6.53□□□□□ -1.36
SMAD1-203ENST00000502342 ERBB3P21860 1342 aa6.52□□□□□ -1.37
SMAD1-203ENST00000502342 E2F4Q16254 413 aa6.52□□□□□ -1.37
SMAD1-203ENST00000502342 DPYSL4O14531 572 aa6.51□□□□□ -1.37
SMAD1-203ENST00000502342 LHX6Q9UPM6 363 aa6.51□□□□□ -1.37
SMAD1-203ENST00000502342 VARS2Q5ST30 1063 aaKnown RBP6.5□□□□□ -1.37
SMAD1-203ENST00000502342 HS3ST6Q96QI5 342 aa6.5□□□□□ -1.37
SMAD1-203ENST00000502342 ZNF316A6NFI3 1004 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-203ENST00000502342 EVI5O60447 810 aa6.49□□□□□ -1.37
SMAD1-203ENST00000502342 CAMK2BQ13554 666 aa6.49□□□□□ -1.37
SMAD1-203ENST00000502342 CDAN1Q8IWY9 1227 aa6.47□□□□□ -1.37
SMAD1-203ENST00000502342 VSIG10Q8N0Z9 540 aa6.47□□□□□ -1.37
SMAD1-203ENST00000502342 KDM4FA0A1W2PPD8 638 aa6.46□□□□□ -1.38
SMAD1-203ENST00000502342 ANO8Q9HCE9 1232 aaPredicted RBP6.45□□□□□ -1.38
SMAD1-203ENST00000502342 ZNF454Q8N9F8 522 aa6.44□□□□□ -1.38
SMAD1-203ENST00000502342 KCNV2Q8TDN2 545 aa6.44□□□□□ -1.38
SMAD1-203ENST00000502342 DDX12PQ92771 950 aa6.43□□□□□ -1.38
SMAD1-203ENST00000502342 AXIN2Q9Y2T1 843 aa6.43□□□□□ -1.38
SMAD1-203ENST00000502342 ZNF687Q8N1G0 1237 aa6.42□□□□□ -1.38
SMAD1-203ENST00000502342 GRXCR2A6NFK2 248 aa6.41□□□□□ -1.38
SMAD1-203ENST00000502342 FOSBP53539 338 aa6.4□□□□□ -1.38
SMAD1-203ENST00000502342 ARHGEF1Q92888 912 aaKnown RBP6.4□□□□□ -1.38
SMAD1-203ENST00000502342 SPDYE16A6NNV3 312 aaPredicted RBP6.39□□□□□ -1.39
SMAD1-203ENST00000502342 PPP4R3BQ5MIZ7 849 aa6.39□□□□□ -1.39
SMAD1-203ENST00000502342 POTEEQ6S8J3 1075 aa6.39□□□□□ -1.39
SMAD1-203ENST00000502342 RBM33Q96EV2 1170 aaKnown RBP6.39□□□□□ -1.39
SMAD1-203ENST00000502342 PCDHGA10Q9Y5H3 936 aa6.39□□□□□ -1.39
SMAD1-203ENST00000502342 PSEN2P49810 448 aa6.38□□□□□ -1.39
SMAD1-203ENST00000502342 PDIA6Q15084 440 aa6.38□□□□□ -1.39
SMAD1-203ENST00000502342 ANKRD13DQ6ZTN6 518 aa6.38□□□□□ -1.39
SMAD1-203ENST00000502342 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
SMAD1-203ENST00000502342 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
SMAD1-203ENST00000502342 ARIH1Q9Y4X5 557 aaPredicted RBP6.38□□□□□ -1.39
SMAD1-203ENST00000502342 PSDA5PKW4 1024 aaPredicted RBP6.37□□□□□ -1.39
SMAD1-203ENST00000502342 MLLT3P42568 568 aaPredicted RBP6.37□□□□□ -1.39
SMAD1-203ENST00000502342 P3H3Q8IVL6 736 aa6.37□□□□□ -1.39
SMAD1-203ENST00000502342 ZDHHC16Q969W1 377 aa6.37□□□□□ -1.39
SMAD1-203ENST00000502342 ADAM33Q9BZ11 813 aa6.37□□□□□ -1.39
SMAD1-203ENST00000502342 SEMA3EO15041 775 aa6.36□□□□□ -1.39
SMAD1-203ENST00000502342 PHF14O94880 888 aa6.36□□□□□ -1.39
SMAD1-203ENST00000502342 PTGER2P43116 358 aa6.36□□□□□ -1.39
SMAD1-203ENST00000502342 JPH4Q96JJ6 628 aa6.36□□□□□ -1.39
SMAD1-203ENST00000502342 PCDH10Q9P2E7 1040 aa6.36□□□□□ -1.39
SMAD1-203ENST00000502342 ARHGAP33O14559 1287 aa6.35□□□□□ -1.39
SMAD1-203ENST00000502342 NBR1Q14596 966 aa6.35□□□□□ -1.39
SMAD1-203ENST00000502342 DMRTA1Q5VZB9 504 aa6.35□□□□□ -1.39
SMAD1-203ENST00000502342 TYW1BQ6NUM6 668 aa6.35□□□□□ -1.39
SMAD1-203ENST00000502342 KCNK17Q96T54 332 aa6.35□□□□□ -1.39
SMAD1-203ENST00000502342 EPAS1Q99814 870 aa6.34□□□□□ -1.39
SMAD1-203ENST00000502342 SLC24A1O60721 1099 aa6.33□□□□□ -1.4
SMAD1-203ENST00000502342 PRIM1P49642 420 aaKnown RBP6.33□□□□□ -1.4
SMAD1-203ENST00000502342 MAP3K7O43318 606 aa6.32□□□□□ -1.4
SMAD1-203ENST00000502342 OSBPP22059 807 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms