RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 NCKAP5LQ9HCH0 1330 aa7.45□□□□□ -1.22
HMGB1P21-201ENST00000502313 TESPA1A2RU30 521 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P21-201ENST00000502313 TIE1P35590 1138 aa7.44□□□□□ -1.22
HMGB1P21-201ENST00000502313 MFSD10Q14728 455 aa7.44□□□□□ -1.22
HMGB1P21-201ENST00000502313 MS4A4AQ96JQ5 239 aa7.44□□□□□ -1.22
HMGB1P21-201ENST00000502313 CRISPLD2Q9H0B8 497 aa7.43□□□□□ -1.22
HMGB1P21-201ENST00000502313 NEUROD2Q15784 382 aa7.42□□□□□ -1.22
HMGB1P21-201ENST00000502313 ZC3H15Q8WU90 426 aaKnown RBP7.42□□□□□ -1.22
HMGB1P21-201ENST00000502313 PPP1R15BQ5SWA1 713 aa7.41□□□□□ -1.22
HMGB1P21-201ENST00000502313 TTLL13PA6NNM8 815 aa7.4□□□□□ -1.22
HMGB1P21-201ENST00000502313 GALR2O43603 387 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P21-201ENST00000502313 TMC2Q8TDI7 906 aa7.4□□□□□ -1.22
HMGB1P21-201ENST00000502313 GPIHBP1Q8IV16 184 aa7.38□□□□□ -1.23
HMGB1P21-201ENST00000502313 TRIM35Q9UPQ4 493 aa7.38□□□□□ -1.23
HMGB1P21-201ENST00000502313 TRPC6Q9Y210 931 aa7.38□□□□□ -1.23
HMGB1P21-201ENST00000502313 ARIH1Q9Y4X5 557 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P21-201ENST00000502313 CLCN6P51797 869 aa7.37□□□□□ -1.23
HMGB1P21-201ENST00000502313 SLC24A3Q9HC58 644 aa7.37□□□□□ -1.23
HMGB1P21-201ENST00000502313 CAMK2BQ13554 666 aa7.36□□□□□ -1.23
HMGB1P21-201ENST00000502313 KRI1Q8N9T8 703 aaKnown RBP7.36□□□□□ -1.23
HMGB1P21-201ENST00000502313 GPHNQ9NQX3 736 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P21-201ENST00000502313 BMP2KQ9NSY1 1161 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P21-201ENST00000502313 LHX8Q68G74 356 aa7.35□□□□□ -1.23
HMGB1P21-201ENST00000502313 SPDYE16A6NNV3 312 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P21-201ENST00000502313 DPYSL4O14531 572 aa7.33□□□□□ -1.24
HMGB1P21-201ENST00000502313 MICALL2Q8IY33 904 aa7.33□□□□□ -1.24
HMGB1P21-201ENST00000502313 PELP1Q8IZL8 1130 aaKnown RBP7.32□□□□□ -1.24
HMGB1P21-201ENST00000502313 ZNF316A6NFI3 1004 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P21-201ENST00000502313 ZMYND10O75800 440 aa7.31□□□□□ -1.24
HMGB1P21-201ENST00000502313 PLCG2P16885 1265 aa7.31□□□□□ -1.24
HMGB1P21-201ENST00000502313 ARID3AQ99856 593 aa7.31□□□□□ -1.24
HMGB1P21-201ENST00000502313 DSG2Q14126 1118 aa7.3□□□□□ -1.24
HMGB1P21-201ENST00000502313 AK7Q96M32 723 aa7.3□□□□□ -1.24
HMGB1P21-201ENST00000502313 DCBLD2Q96PD2 775 aa7.3□□□□□ -1.24
HMGB1P21-201ENST00000502313 ZMYND15Q9H091 742 aa7.3□□□□□ -1.24
HMGB1P21-201ENST00000502313 POTEB2H3BUK9 544 aa7.29□□□□□ -1.24
HMGB1P21-201ENST00000502313 MAP3K9P80192 1104 aa7.29□□□□□ -1.24
HMGB1P21-201ENST00000502313 PDIA6Q15084 440 aa7.29□□□□□ -1.24
HMGB1P21-201ENST00000502313 RBM26Q5T8P6 1007 aaKnown RBP7.29□□□□□ -1.24
HMGB1P21-201ENST00000502313 BARGINQ6ZT62 677 aa7.29□□□□□ -1.24
HMGB1P21-201ENST00000502313 OCEL1Q9H607 264 aa7.29□□□□□ -1.24
HMGB1P21-201ENST00000502313 BOLA1Q9Y3E2 137 aa7.29□□□□□ -1.24
HMGB1P21-201ENST00000502313 CCDC180Q9P1Z9 1646 aa7.29□□□□□ -1.24
HMGB1P21-201ENST00000502313 MLLT3P42568 568 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P21-201ENST00000502313 FOXK1P85037 733 aa7.28□□□□□ -1.24
HMGB1P21-201ENST00000502313 IER5LQ5T953 404 aa7.28□□□□□ -1.24
HMGB1P21-201ENST00000502313 ILDR1Q86SU0 546 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P21-201ENST00000502313 SEC24BO95487 1268 aa7.27□□□□□ -1.25
HMGB1P21-201ENST00000502313 DPY19L2Q6NUT2 758 aa7.27□□□□□ -1.25
HMGB1P21-201ENST00000502313 PLPP6Q8IY26 295 aa7.27□□□□□ -1.25
HMGB1P21-201ENST00000502313 L3MBTL3Q96JM7 780 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P21-201ENST00000502313 GRXCR2A6NFK2 248 aa7.25□□□□□ -1.25
HMGB1P21-201ENST00000502313 ATN1P54259 1190 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P21-201ENST00000502313 RSPH6AQ9H0K4 717 aa7.25□□□□□ -1.25
HMGB1P21-201ENST00000502313 EMILIN3Q9NT22 766 aa7.25□□□□□ -1.25
HMGB1P21-201ENST00000502313 NUTM2FA1L443 756 aa7.24□□□□□ -1.25
HMGB1P21-201ENST00000502313 PDCD7Q8N8D1 485 aaKnown RBP7.24□□□□□ -1.25
HMGB1P21-201ENST00000502313 C2orf72A6NCS6 295 aa7.23□□□□□ -1.25
HMGB1P21-201ENST00000502313 TBC1D12O60347 775 aa7.23□□□□□ -1.25
HMGB1P21-201ENST00000502313 UPF1Q92900 1129 aaKnown RBP eCLIP7.23□□□□□ -1.25
HMGB1P21-201ENST00000502313 ATMINO43313 823 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P21-201ENST00000502313 IRX5P78411 483 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P21-201ENST00000502313 ASTLQ6HA08 431 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P21-201ENST00000502313 POTEJP0CG39 1038 aa7.21□□□□□ -1.26
HMGB1P21-201ENST00000502313 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.26
HMGB1P21-201ENST00000502313 C3orf67Q6ZVT6 689 aa7.2□□□□□ -1.26
HMGB1P21-201ENST00000502313 OTUD5Q96G74 571 aa7.2□□□□□ -1.26
HMGB1P21-201ENST00000502313 TMEM121BQ9BXQ6 578 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P21-201ENST00000502313 GPBP1L1Q9HC44 474 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P21-201ENST00000502313 CCDC9Q9Y3X0 531 aaKnown RBP7.19□□□□□ -1.26
HMGB1P21-201ENST00000502313 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
HMGB1P21-201ENST00000502313 PDE4DQ08499 809 aa7.18□□□□□ -1.26
HMGB1P21-201ENST00000502313 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
HMGB1P21-201ENST00000502313 POTEFA5A3E0 1075 aa7.17□□□□□ -1.26
HMGB1P21-201ENST00000502313 FCHSD2O94868 740 aa7.17□□□□□ -1.26
HMGB1P21-201ENST00000502313 ZBTB7CA1YPR0 619 aa7.16□□□□□ -1.26
HMGB1P21-201ENST00000502313 TRIM66O15016 1216 aa7.16□□□□□ -1.26
HMGB1P21-201ENST00000502313 MAP2K5Q13163 448 aa7.16□□□□□ -1.26
HMGB1P21-201ENST00000502313 IL27Q8NEV9 243 aa7.16□□□□□ -1.26
HMGB1P21-201ENST00000502313 NECTIN2Q92692 538 aa7.16□□□□□ -1.26
HMGB1P21-201ENST00000502313 DDX12PQ92771 950 aa7.16□□□□□ -1.26
HMGB1P21-201ENST00000502313 MINK1Q8N4C8 1332 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P21-201ENST00000502313 KIF3CO14782 793 aa7.15□□□□□ -1.26
HMGB1P21-201ENST00000502313 HIC1Q14526 733 aa7.15□□□□□ -1.26
HMGB1P21-201ENST00000502313 ARID3CA6NKF2 412 aa7.14□□□□□ -1.27
HMGB1P21-201ENST00000502313 GNPATO15228 680 aa7.14□□□□□ -1.27
HMGB1P21-201ENST00000502313 PDIA4P13667 645 aaKnown RBP7.14□□□□□ -1.27
HMGB1P21-201ENST00000502313 TTLL12Q14166 644 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P21-201ENST00000502313 SLC39A7Q92504 469 aa7.14□□□□□ -1.27
HMGB1P21-201ENST00000502313 EVI5O60447 810 aa7.13□□□□□ -1.27
HMGB1P21-201ENST00000502313 CCDC102AQ96A19 550 aa7.13□□□□□ -1.27
HMGB1P21-201ENST00000502313 OXER1Q8TDS5 423 aa7.12□□□□□ -1.27
HMGB1P21-201ENST00000502313 DDRGK1Q96HY6 314 aa7.12□□□□□ -1.27
HMGB1P21-201ENST00000502313 METRNQ9UJH8 293 aa7.12□□□□□ -1.27
HMGB1P21-201ENST00000502313 C7P10643 843 aa7.11□□□□□ -1.27
HMGB1P21-201ENST00000502313 ABCC9O60706 1549 aa7.11□□□□□ -1.27
HMGB1P21-201ENST00000502313 APBB1O00213 710 aa7.1□□□□□ -1.27
HMGB1P21-201ENST00000502313 IRF6O14896 467 aa7.1□□□□□ -1.27
HMGB1P21-201ENST00000502313 PTGER2P43116 358 aa7.1□□□□□ -1.27
HMGB1P21-201ENST00000502313 GPR37O15354 613 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms