RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 GPHNQ9NQX3 736 aaPredicted RBP14.58□□□□□ -0.08
ATXN3-206ENST00000502250 C3orf67Q6ZVT6 689 aa14.57□□□□□ -0.08
ATXN3-206ENST00000502250 WDR70Q9NW82 654 aa14.57□□□□□ -0.08
ATXN3-206ENST00000502250 TMC2Q8TDI7 906 aa14.55□□□□□ -0.08
ATXN3-206ENST00000502250 LARP6Q9BRS8 491 aaKnown RBP14.55□□□□□ -0.08
ATXN3-206ENST00000502250 KIF3CO14782 793 aa14.54□□□□□ -0.08
ATXN3-206ENST00000502250 DDX27Q96GQ7 796 aaKnown RBP14.53□□□□□ -0.08
ATXN3-206ENST00000502250 POTEB2H3BUK9 544 aa14.51□□□□□ -0.09
ATXN3-206ENST00000502250 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
ATXN3-206ENST00000502250 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
ATXN3-206ENST00000502250 TMEM92Q6UXU6 159 aa14.49□□□□□ -0.09
ATXN3-206ENST00000502250 MAMSTRQ6ZN01 415 aa14.49□□□□□ -0.09
ATXN3-206ENST00000502250 C2orf72A6NCS6 295 aa14.48□□□□□ -0.09
ATXN3-206ENST00000502250 FOXK1P85037 733 aa14.48□□□□□ -0.09
ATXN3-206ENST00000502250 P3H3Q8IVL6 736 aa14.48□□□□□ -0.09
ATXN3-206ENST00000502250 PPP1R15BQ5SWA1 713 aa14.47□□□□□ -0.09
ATXN3-206ENST00000502250 DSG2Q14126 1118 aa14.44□□□□□ -0.1
ATXN3-206ENST00000502250 E2F4Q16254 413 aa14.44□□□□□ -0.1
ATXN3-206ENST00000502250 SCUBE2Q9NQ36 999 aa14.43□□□□□ -0.1
ATXN3-206ENST00000502250 CAMK2BQ13554 666 aa14.42□□□□□ -0.1
ATXN3-206ENST00000502250 PLPP6Q8IY26 295 aa14.39□□□□□ -0.11
ATXN3-206ENST00000502250 KCNV2Q8TDN2 545 aa14.39□□□□□ -0.11
ATXN3-206ENST00000502250 ARIH1Q9Y4X5 557 aaPredicted RBP14.37□□□□□ -0.11
ATXN3-206ENST00000502250 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
ATXN3-206ENST00000502250 LHX8Q68G74 356 aa14.33□□□□□ -0.12
ATXN3-206ENST00000502250 BCANQ96GW7 911 aa14.33□□□□□ -0.12
ATXN3-206ENST00000502250 SLAIN1Q8ND83 568 aa14.31□□□□□ -0.12
ATXN3-206ENST00000502250 SLC34A2O95436 690 aa14.28□□□□□ -0.12
ATXN3-206ENST00000502250 EMILIN3Q9NT22 766 aa14.28□□□□□ -0.12
ATXN3-206ENST00000502250 OTUD5Q96G74 571 aa14.27□□□□□ -0.13
ATXN3-206ENST00000502250 NBR1Q14596 966 aa14.26□□□□□ -0.13
ATXN3-206ENST00000502250 OXER1Q8TDS5 423 aa14.24□□□□□ -0.13
ATXN3-206ENST00000502250 PTCD2Q8WV60 388 aaKnown RBP14.22□□□□□ -0.13
ATXN3-206ENST00000502250 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
ATXN3-206ENST00000502250 SPDYE16A6NNV3 312 aaPredicted RBP14.18□□□□□ -0.14
ATXN3-206ENST00000502250 DPYSL4O14531 572 aa14.18□□□□□ -0.14
ATXN3-206ENST00000502250 HOXB3P14651 431 aaPredicted RBP14.17□□□□□ -0.14
ATXN3-206ENST00000502250 PDIA6Q15084 440 aa14.17□□□□□ -0.14
ATXN3-206ENST00000502250 SNPHO15079 494 aa14.16□□□□□ -0.14
ATXN3-206ENST00000502250 TBC1D12O60347 775 aa14.16□□□□□ -0.14
ATXN3-206ENST00000502250 MAP3K9P80192 1104 aa14.15□□□□□ -0.14
ATXN3-206ENST00000502250 UPF1Q92900 1129 aaKnown RBP eCLIP14.15□□□□□ -0.14
ATXN3-206ENST00000502250 ZSWIM6Q9HCJ5 1215 aa14.14□□□□□ -0.15
ATXN3-206ENST00000502250 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
ATXN3-206ENST00000502250 PCDHGA4Q9Y5G9 962 aa14.11□□□□□ -0.15
ATXN3-206ENST00000502250 TESPA1A2RU30 521 aaPredicted RBP14.08□□□□□ -0.16
ATXN3-206ENST00000502250 ZNF316A6NFI3 1004 aaPredicted RBP14.08□□□□□ -0.16
ATXN3-206ENST00000502250 SEMA3EO15041 775 aa14.07□□□□□ -0.16
ATXN3-206ENST00000502250 ZNF710Q8N1W2 664 aa14.06□□□□□ -0.16
ATXN3-206ENST00000502250 EVI5O60447 810 aa14.05□□□□□ -0.16
ATXN3-206ENST00000502250 ANO8Q9HCE9 1232 aaPredicted RBP14.05□□□□□ -0.16
ATXN3-206ENST00000502250 KDM4FA0A1W2PPD8 638 aa14.03□□□□□ -0.16
ATXN3-206ENST00000502250 PTGER2P43116 358 aa14.03□□□□□ -0.16
ATXN3-206ENST00000502250 GPR153Q6NV75 609 aa14.03□□□□□ -0.16
ATXN3-206ENST00000502250 TULP1O00294 542 aaPredicted RBP14.01□□□□□ -0.17
ATXN3-206ENST00000502250 SMYD5Q6GMV2 418 aa14.01□□□□□ -0.17
ATXN3-206ENST00000502250 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
ATXN3-206ENST00000502250 HOXB1P14653 301 aaPredicted RBP13.97□□□□□ -0.17
ATXN3-206ENST00000502250 MLLT3P42568 568 aaPredicted RBP13.96□□□□□ -0.17
ATXN3-206ENST00000502250 NUDT7P0C024 238 aa13.94□□□□□ -0.18
ATXN3-206ENST00000502250 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATXN3-206ENST00000502250 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATXN3-206ENST00000502250 DDX12PQ92771 950 aa13.9□□□□□ -0.18
ATXN3-206ENST00000502250 JPH4Q96JJ6 628 aa13.9□□□□□ -0.18
ATXN3-206ENST00000502250 PHF14O94880 888 aa13.89□□□□□ -0.19
ATXN3-206ENST00000502250 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
ATXN3-206ENST00000502250 GRXCR2A6NFK2 248 aa13.88□□□□□ -0.19
ATXN3-206ENST00000502250 EPAS1Q99814 870 aa13.88□□□□□ -0.19
ATXN3-206ENST00000502250 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
ATXN3-206ENST00000502250 ST18O60284 1047 aa13.87□□□□□ -0.19
ATXN3-206ENST00000502250 OSBPP22059 807 aa13.86□□□□□ -0.19
ATXN3-206ENST00000502250 FOSBP53539 338 aa13.86□□□□□ -0.19
ATXN3-206ENST00000502250 FBXW7Q969H0 707 aa13.84□□□□□ -0.19
ATXN3-206ENST00000502250 LHX6Q9UPM6 363 aa13.84□□□□□ -0.19
ATXN3-206ENST00000502250 PCDHGA10Q9Y5H3 936 aa13.84□□□□□ -0.19
ATXN3-206ENST00000502250 TYW1BQ6NUM6 668 aa13.83□□□□□ -0.2
ATXN3-206ENST00000502250 EN1Q05925 392 aaPredicted RBP13.8□□□□□ -0.2
ATXN3-206ENST00000502250 ZNF454Q8N9F8 522 aa13.8□□□□□ -0.2
ATXN3-206ENST00000502250 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
ATXN3-206ENST00000502250 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
ATXN3-206ENST00000502250 PPP4R3BQ5MIZ7 849 aa13.78□□□□□ -0.2
ATXN3-206ENST00000502250 ZDHHC16Q969W1 377 aa13.78□□□□□ -0.2
ATXN3-206ENST00000502250 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
ATXN3-206ENST00000502250 EMP3P54852 163 aa13.75□□□□□ -0.21
ATXN3-206ENST00000502250 LCE2DQ5TA82 110 aaPredicted RBP13.75□□□□□ -0.21
ATXN3-206ENST00000502250 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
ATXN3-206ENST00000502250 ERBB3P21860 1342 aa13.72□□□□□ -0.21
ATXN3-206ENST00000502250 MAP3K7O43318 606 aa13.72□□□□□ -0.21
ATXN3-206ENST00000502250 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.21
ATXN3-206ENST00000502250 MARVELD3Q96A59 401 aa13.71□□□□□ -0.21
ATXN3-206ENST00000502250 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
ATXN3-206ENST00000502250 BCL2L12Q9HB09 334 aa13.71□□□□□ -0.21
ATXN3-206ENST00000502250 ZC3H15Q8WU90 426 aaKnown RBP13.7□□□□□ -0.22
ATXN3-206ENST00000502250 RBM33Q96EV2 1170 aaKnown RBP13.7□□□□□ -0.22
ATXN3-206ENST00000502250 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
ATXN3-206ENST00000502250 GPR37O15354 613 aa13.69□□□□□ -0.22
ATXN3-206ENST00000502250 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
ATXN3-206ENST00000502250 C6orf132Q5T0Z8 1188 aa13.67□□□□□ -0.22
ATXN3-206ENST00000502250 FCHSD2O94868 740 aa13.66□□□□□ -0.22
ATXN3-206ENST00000502250 PTGDRQ13258 359 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms