RNA–Protein interactions for RNA: ENST00000499601.2

AC008393.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008393.1, Length 1,454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008393.1-201ENST00000499601 ARAP3Q8WWN8 1544 aa28.1■■■□□ 2.09
AC008393.1-201ENST00000499601 PLCH2O75038 1416 aa28.1■■■□□ 2.09
AC008393.1-201ENST00000499601 DIP2BQ9P265 1576 aa28.08■■■□□ 2.09
AC008393.1-201ENST00000499601 ARHGAP5Q13017 1502 aa28.06■■■□□ 2.08
AC008393.1-201ENST00000499601 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
AC008393.1-201ENST00000499601 PCGF6Q9BYE7 350 aa28.04■■■□□ 2.08
AC008393.1-201ENST00000499601 CD109Q6YHK3 1445 aa28.03■■■□□ 2.08
AC008393.1-201ENST00000499601 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
AC008393.1-201ENST00000499601 MAP3K4Q9Y6R4 1608 aa28.01■■■□□ 2.07
AC008393.1-201ENST00000499601 EFCAB2Q5VUJ9 269 aa28■■■□□ 2.07
AC008393.1-201ENST00000499601 ZNF777Q9ULD5 760 aaPredicted RBP28■■■□□ 2.07
AC008393.1-201ENST00000499601 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
AC008393.1-201ENST00000499601 SAMD9LQ8IVG5 1584 aa27.97■■■□□ 2.07
AC008393.1-201ENST00000499601 PLEKHH2Q8IVE3 1493 aa27.96■■■□□ 2.07
AC008393.1-201ENST00000499601 ZNF644Q9H582 1327 aaPredicted RBP27.96■■■□□ 2.07
AC008393.1-201ENST00000499601 FANCAO15360 1455 aa27.95■■■□□ 2.07
AC008393.1-201ENST00000499601 KIF13AQ9H1H9 1805 aa27.95■■■□□ 2.06
AC008393.1-201ENST00000499601 CFAP74Q9C0B2 1584 aa27.95■■■□□ 2.06
AC008393.1-201ENST00000499601 DNMT1P26358 1616 aaKnown RBP27.91■■■□□ 2.06
AC008393.1-201ENST00000499601 KIAA1107Q9UPP5 1409 aa27.9■■■□□ 2.06
AC008393.1-201ENST00000499601 ABCC1P33527 1531 aa27.88■■■□□ 2.05
AC008393.1-201ENST00000499601 ARHGEF5Q12774 1597 aa27.88■■■□□ 2.05
AC008393.1-201ENST00000499601 ITGAEP38570 1179 aa27.88■■■□□ 2.05
AC008393.1-201ENST00000499601 NEO1Q92859 1461 aa27.87■■■□□ 2.05
AC008393.1-201ENST00000499601 SYCP2Q9BX26 1530 aa27.86■■■□□ 2.05
AC008393.1-201ENST00000499601 DAPK1P53355 1430 aa27.86■■■□□ 2.05
AC008393.1-201ENST00000499601 RSPH4AQ5TD94 716 aa27.85■■■□□ 2.05
AC008393.1-201ENST00000499601 MBD5Q9P267 1494 aa27.85■■■□□ 2.05
AC008393.1-201ENST00000499601 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
AC008393.1-201ENST00000499601 TEX14Q8IWB6 1497 aa27.84■■■□□ 2.05
AC008393.1-201ENST00000499601 ABCC5O15440 1437 aa27.84■■■□□ 2.05
AC008393.1-201ENST00000499601 ADGRL1O94910 1474 aa27.83■■■□□ 2.04
AC008393.1-201ENST00000499601 CROCC2H7BZ55 1655 aa27.82■■■□□ 2.04
AC008393.1-201ENST00000499601 TRHP20396 242 aaPredicted RBP27.82■■■□□ 2.04
AC008393.1-201ENST00000499601 HNRNPMP52272 730 aaKnown RBP eCLIP27.82■■■□□ 2.04
AC008393.1-201ENST00000499601 CCDC141Q6ZP82 1450 aa27.81■■■□□ 2.04
AC008393.1-201ENST00000499601 PPRC1Q5VV67 1664 aaKnown RBP27.81■■■□□ 2.04
AC008393.1-201ENST00000499601 TSPOAP1O95153 1857 aa27.8■■■□□ 2.04
AC008393.1-201ENST00000499601 PTPRKQ15262 1439 aa27.79■■■□□ 2.04
AC008393.1-201ENST00000499601 SHANK2Q9UPX8 1470 aa27.79■■■□□ 2.04
AC008393.1-201ENST00000499601 ARHGEF12Q9NZN5 1544 aa27.79■■■□□ 2.04
AC008393.1-201ENST00000499601 SCAPERQ9BY12 1400 aa27.77■■■□□ 2.04
AC008393.1-201ENST00000499601 TSPY4P0CV99 314 aa27.75■■■□□ 2.03
AC008393.1-201ENST00000499601 TSPY10P0CW01 314 aa27.75■■■□□ 2.03
AC008393.1-201ENST00000499601 ADGBQ8N7X0 1667 aa27.72■■■□□ 2.03
AC008393.1-201ENST00000499601 ROCK1Q13464 1354 aa27.72■■■□□ 2.03
AC008393.1-201ENST00000499601 C9orf84Q5VXU9 1444 aa27.71■■■□□ 2.03
AC008393.1-201ENST00000499601 TRAPPC8Q9Y2L5 1435 aa27.71■■■□□ 2.03
AC008393.1-201ENST00000499601 MAST1Q9Y2H9 1570 aa27.71■■■□□ 2.03
AC008393.1-201ENST00000499601 ADGRL2O95490 1459 aa27.7■■■□□ 2.02
AC008393.1-201ENST00000499601 CHIC2Q9UKJ5 165 aa27.7■■■□□ 2.02
AC008393.1-201ENST00000499601 ZNF518AQ6AHZ1 1483 aa27.69■■■□□ 2.02
AC008393.1-201ENST00000499601 DENND4BO75064 1496 aaPredicted RBP27.68■■■□□ 2.02
AC008393.1-201ENST00000499601 POGZQ7Z3K3 1410 aa27.67■■■□□ 2.02
AC008393.1-201ENST00000499601 HFM1A2PYH4 1435 aa27.67■■■□□ 2.02
AC008393.1-201ENST00000499601 ANKRD30AQ9BXX3 1397 aa27.65■■■□□ 2.02
AC008393.1-201ENST00000499601 AFAP1Q8N556 730 aa27.64■■■□□ 2.01
AC008393.1-201ENST00000499601 RTEL1-TNFRSF6BF6WH68 1400 aa27.63■■■□□ 2.01
AC008393.1-201ENST00000499601 NCOA1Q15788 1441 aa27.63■■■□□ 2.01
AC008393.1-201ENST00000499601 GCC2Q8IWJ2 1684 aa27.62■■■□□ 2.01
AC008393.1-201ENST00000499601 KDM5CP41229 1560 aa27.62■■■□□ 2.01
AC008393.1-201ENST00000499601 SETD5Q9C0A6 1442 aa27.62■■■□□ 2.01
AC008393.1-201ENST00000499601 SPAG9O60271 1321 aaKnown RBP27.62■■■□□ 2.01
AC008393.1-201ENST00000499601 NAIPQ13075 1403 aa27.6■■■□□ 2.01
AC008393.1-201ENST00000499601 RICTORQ6R327 1708 aa27.6■■■□□ 2.01
AC008393.1-201ENST00000499601 PLXNC1O60486 1568 aa27.6■■■□□ 2.01
AC008393.1-201ENST00000499601 RRP7BPQ9NSQ0 103 aa27.59■■■□□ 2.01
AC008393.1-201ENST00000499601 INO80Q9ULG1 1556 aaPredicted RBP27.59■■■□□ 2.01
AC008393.1-201ENST00000499601 ZFYVE16Q7Z3T8 1539 aa27.59■■■□□ 2.01
AC008393.1-201ENST00000499601 ATP7AQ04656 1500 aa27.57■■■□□ 2
AC008393.1-201ENST00000499601 MLH3Q9UHC1 1453 aa27.55■■■□□ 2
AC008393.1-201ENST00000499601 HECW2Q9P2P5 1572 aa27.54■■■□□ 2
AC008393.1-201ENST00000499601 RAB3GAP2Q9H2M9 1393 aa27.54■■■□□ 2
AC008393.1-201ENST00000499601 RAPGEF3O95398 923 aa27.54■■■□□ 2
AC008393.1-201ENST00000499601 FRMPD1Q5SYB0 1578 aa27.54■■■□□ 2
AC008393.1-201ENST00000499601 KIF15Q9NS87 1388 aa27.53■■■□□ 2
AC008393.1-201ENST00000499601 HRCP23327 699 aa27.51■■■□□ 2
AC008393.1-201ENST00000499601 ZMYM4Q5VZL5 1548 aa27.51■■□□□ 1.99
AC008393.1-201ENST00000499601 KIDINS220Q9ULH0 1771 aa27.51■■□□□ 1.99
AC008393.1-201ENST00000499601 MYT1LQ9UL68 1186 aa27.51■■□□□ 1.99
AC008393.1-201ENST00000499601 DUOX2Q9NRD8 1548 aa27.48■■□□□ 1.99
AC008393.1-201ENST00000499601 ANKRD50Q9ULJ7 1429 aa27.47■■□□□ 1.99
AC008393.1-201ENST00000499601 COL17A1Q9UMD9 1497 aaPredicted RBP27.47■■□□□ 1.99
AC008393.1-201ENST00000499601 ACIN1Q9UKV3 1341 aaKnown RBP27.47■■□□□ 1.99
AC008393.1-201ENST00000499601 MAGI2Q86UL8 1455 aa27.46■■□□□ 1.99
AC008393.1-201ENST00000499601 ERBINQ96RT1 1412 aa27.43■■□□□ 1.98
AC008393.1-201ENST00000499601 KDM6BO15054 1643 aa27.42■■□□□ 1.98
AC008393.1-201ENST00000499601 ABCA6Q8N139 1617 aa27.4■■□□□ 1.98
AC008393.1-201ENST00000499601 DIP2CQ9Y2E4 1556 aa27.38■■□□□ 1.97
AC008393.1-201ENST00000499601 DHX29Q7Z478 1369 aaKnown RBP27.37■■□□□ 1.97
AC008393.1-201ENST00000499601 A2MP01023 1474 aa27.36■■□□□ 1.97
AC008393.1-201ENST00000499601 YEATS2Q9ULM3 1422 aa27.34■■□□□ 1.97
AC008393.1-201ENST00000499601 EIF2AK4Q9P2K8 1649 aaKnown RBP27.34■■□□□ 1.97
AC008393.1-201ENST00000499601 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
AC008393.1-201ENST00000499601 ATP10AO60312 1499 aa27.3■■□□□ 1.96
AC008393.1-201ENST00000499601 TRIM52Q96A61 297 aa27.29■■□□□ 1.96
AC008393.1-201ENST00000499601 REREQ9P2R6 1566 aa27.28■■□□□ 1.96
AC008393.1-201ENST00000499601 UNC13BO14795 1591 aa27.28■■□□□ 1.96
AC008393.1-201ENST00000499601 BCORL1Q5H9F3 1711 aa27.26■■□□□ 1.95
AC008393.1-201ENST00000499601 DHX57Q6P158 1386 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms