RNA–Protein interactions for RNA: ENST00000499392.1

LRAT-202, Transcript of lecithin retinol acyltransferase, humanhuman

TSL 1 (best)

Gene LRAT, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-202ENST00000499392 KIF3CO14782 793 aa10.13□□□□□ -0.79
LRAT-202ENST00000499392 CRISPLD2Q9H0B8 497 aa10.13□□□□□ -0.79
LRAT-202ENST00000499392 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
LRAT-202ENST00000499392 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
LRAT-202ENST00000499392 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.12□□□□□ -0.79
LRAT-202ENST00000499392 SCUBE2Q9NQ36 999 aa10.1□□□□□ -0.79
LRAT-202ENST00000499392 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
LRAT-202ENST00000499392 C2orf72A6NCS6 295 aa10.07□□□□□ -0.8
LRAT-202ENST00000499392 PDE4AP27815 886 aa10.07□□□□□ -0.8
LRAT-202ENST00000499392 MFSD10Q14728 455 aa10.06□□□□□ -0.8
LRAT-202ENST00000499392 KDM2AQ9Y2K7 1162 aa10.06□□□□□ -0.8
LRAT-202ENST00000499392 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
LRAT-202ENST00000499392 SLAIN1Q8ND83 568 aa10.04□□□□□ -0.8
LRAT-202ENST00000499392 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
LRAT-202ENST00000499392 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
LRAT-202ENST00000499392 FOXK1P85037 733 aa10.03□□□□□ -0.8
LRAT-202ENST00000499392 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
LRAT-202ENST00000499392 DSG2Q14126 1118 aa10.02□□□□□ -0.81
LRAT-202ENST00000499392 PPP1R15BQ5SWA1 713 aa9.99□□□□□ -0.81
LRAT-202ENST00000499392 DDX27Q96GQ7 796 aaKnown RBP9.99□□□□□ -0.81
LRAT-202ENST00000499392 PLPP6Q8IY26 295 aa9.97□□□□□ -0.81
LRAT-202ENST00000499392 HOXB3P14651 431 aaPredicted RBP9.95□□□□□ -0.82
LRAT-202ENST00000499392 CAMK2BQ13554 666 aa9.95□□□□□ -0.82
LRAT-202ENST00000499392 WDR70Q9NW82 654 aa9.93□□□□□ -0.82
LRAT-202ENST00000499392 SLC34A2O95436 690 aa9.92□□□□□ -0.82
LRAT-202ENST00000499392 POTEMA6NI47 508 aa9.9□□□□□ -0.82
LRAT-202ENST00000499392 E2F4Q16254 413 aa9.9□□□□□ -0.82
LRAT-202ENST00000499392 EMILIN3Q9NT22 766 aa9.9□□□□□ -0.82
LRAT-202ENST00000499392 SNPHO15079 494 aa9.88□□□□□ -0.83
LRAT-202ENST00000499392 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
LRAT-202ENST00000499392 PTCD2Q8WV60 388 aaKnown RBP9.88□□□□□ -0.83
LRAT-202ENST00000499392 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
LRAT-202ENST00000499392 POTEGQ6S5H5 508 aa9.87□□□□□ -0.83
LRAT-202ENST00000499392 ARIH1Q9Y4X5 557 aaPredicted RBP9.87□□□□□ -0.83
LRAT-202ENST00000499392 KCNV2Q8TDN2 545 aa9.86□□□□□ -0.83
LRAT-202ENST00000499392 FAM163AQ96GL9 167 aaPredicted RBP9.86□□□□□ -0.83
LRAT-202ENST00000499392 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
LRAT-202ENST00000499392 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
LRAT-202ENST00000499392 GPR153Q6NV75 609 aa9.83□□□□□ -0.84
LRAT-202ENST00000499392 KDM4FA0A1W2PPD8 638 aa9.82□□□□□ -0.84
LRAT-202ENST00000499392 PCDH10Q9P2E7 1040 aa9.82□□□□□ -0.84
LRAT-202ENST00000499392 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
LRAT-202ENST00000499392 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
LRAT-202ENST00000499392 ARHGEF1Q92888 912 aaKnown RBP9.81□□□□□ -0.84
LRAT-202ENST00000499392 UPF1Q92900 1129 aaKnown RBP eCLIP9.8□□□□□ -0.84
LRAT-202ENST00000499392 RIMBP2O15034 1052 aa9.79□□□□□ -0.84
LRAT-202ENST00000499392 ST18O60284 1047 aa9.79□□□□□ -0.84
LRAT-202ENST00000499392 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
LRAT-202ENST00000499392 DPYSL4O14531 572 aa9.78□□□□□ -0.84
LRAT-202ENST00000499392 ARSIQ5FYB1 569 aa9.78□□□□□ -0.84
LRAT-202ENST00000499392 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
LRAT-202ENST00000499392 TBC1D12O60347 775 aa9.77□□□□□ -0.85
LRAT-202ENST00000499392 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
LRAT-202ENST00000499392 KHSRPQ92945 711 aaKnown RBP eCLIP9.76□□□□□ -0.85
LRAT-202ENST00000499392 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
LRAT-202ENST00000499392 PDIA6Q15084 440 aa9.75□□□□□ -0.85
LRAT-202ENST00000499392 EVI5O60447 810 aa9.73□□□□□ -0.85
LRAT-202ENST00000499392 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
LRAT-202ENST00000499392 NUDT7P0C024 238 aa9.72□□□□□ -0.85
LRAT-202ENST00000499392 PLSCR2Q9NRY7 297 aa9.72□□□□□ -0.85
LRAT-202ENST00000499392 PTGER2P43116 358 aa9.69□□□□□ -0.86
LRAT-202ENST00000499392 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
LRAT-202ENST00000499392 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
LRAT-202ENST00000499392 ZNF316A6NFI3 1004 aaPredicted RBP9.66□□□□□ -0.86
LRAT-202ENST00000499392 SEMA3EO15041 775 aa9.66□□□□□ -0.86
LRAT-202ENST00000499392 TESPA1A2RU30 521 aaPredicted RBP9.64□□□□□ -0.87
LRAT-202ENST00000499392 FOSBP53539 338 aa9.63□□□□□ -0.87
LRAT-202ENST00000499392 EMP3P54852 163 aa9.63□□□□□ -0.87
LRAT-202ENST00000499392 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
LRAT-202ENST00000499392 MLLT3P42568 568 aaPredicted RBP9.62□□□□□ -0.87
LRAT-202ENST00000499392 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
LRAT-202ENST00000499392 CDAN1Q8IWY9 1227 aa9.61□□□□□ -0.87
LRAT-202ENST00000499392 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
LRAT-202ENST00000499392 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
LRAT-202ENST00000499392 PSDA5PKW4 1024 aaPredicted RBP9.6□□□□□ -0.87
LRAT-202ENST00000499392 PHF14O94880 888 aa9.6□□□□□ -0.87
LRAT-202ENST00000499392 DDX12PQ92771 950 aa9.6□□□□□ -0.87
LRAT-202ENST00000499392 ERBB3P21860 1342 aa9.59□□□□□ -0.87
LRAT-202ENST00000499392 FAM205CA6NFA0 338 aa9.58□□□□□ -0.88
LRAT-202ENST00000499392 OSBPP22059 807 aa9.58□□□□□ -0.88
LRAT-202ENST00000499392 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
LRAT-202ENST00000499392 NBR1Q14596 966 aa9.58□□□□□ -0.88
LRAT-202ENST00000499392 VARS2Q5ST30 1063 aaKnown RBP9.58□□□□□ -0.88
LRAT-202ENST00000499392 ZNF454Q8N9F8 522 aa9.57□□□□□ -0.88
LRAT-202ENST00000499392 HS3ST6Q96QI5 342 aa9.57□□□□□ -0.88
LRAT-202ENST00000499392 EPAS1Q99814 870 aa9.57□□□□□ -0.88
LRAT-202ENST00000499392 GRXCR2A6NFK2 248 aa9.56□□□□□ -0.88
LRAT-202ENST00000499392 BCANQ96GW7 911 aa9.56□□□□□ -0.88
LRAT-202ENST00000499392 TYW1BQ6NUM6 668 aa9.55□□□□□ -0.88
LRAT-202ENST00000499392 PPP4R3BQ5MIZ7 849 aa9.54□□□□□ -0.88
LRAT-202ENST00000499392 ZNF687Q8N1G0 1237 aa9.54□□□□□ -0.88
LRAT-202ENST00000499392 FBXW7Q969H0 707 aa9.54□□□□□ -0.88
LRAT-202ENST00000499392 ZDHHC16Q969W1 377 aa9.54□□□□□ -0.88
LRAT-202ENST00000499392 POTEEQ6S8J3 1075 aa9.53□□□□□ -0.88
LRAT-202ENST00000499392 ADAM33Q9BZ11 813 aa9.53□□□□□ -0.88
LRAT-202ENST00000499392 EN1Q05925 392 aaPredicted RBP9.52□□□□□ -0.89
LRAT-202ENST00000499392 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
LRAT-202ENST00000499392 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
LRAT-202ENST00000499392 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
LRAT-202ENST00000499392 C6orf132Q5T0Z8 1188 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms