RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 MIA2Q96PC5 1412 aa30.11■■■□□ 2.41
LINC01550-201ENST00000499006 FGD6Q6ZV73 1430 aa30.09■■■□□ 2.41
LINC01550-201ENST00000499006 ARHGAP5Q13017 1502 aa30.09■■■□□ 2.41
LINC01550-201ENST00000499006 PTPN23Q9H3S7 1636 aa30.07■■■□□ 2.4
LINC01550-201ENST00000499006 CFDP1Q9UEE9 299 aaPredicted RBP30.06■■■□□ 2.4
LINC01550-201ENST00000499006 RRBP1Q9P2E9 1410 aaKnown RBP30.06■■■□□ 2.4
LINC01550-201ENST00000499006 CFAP74Q9C0B2 1584 aa30.05■■■□□ 2.4
LINC01550-201ENST00000499006 SAMD9LQ8IVG5 1584 aa30.04■■■□□ 2.4
LINC01550-201ENST00000499006 FANCAO15360 1455 aa30.03■■■□□ 2.4
LINC01550-201ENST00000499006 TRHP20396 242 aaPredicted RBP30.03■■■□□ 2.4
LINC01550-201ENST00000499006 TCOF1Q13428 1488 aaKnown RBP30.02■■■□□ 2.4
LINC01550-201ENST00000499006 EFCAB2Q5VUJ9 269 aa29.99■■■□□ 2.39
LINC01550-201ENST00000499006 CAMSAP2Q08AD1 1489 aa29.99■■■□□ 2.39
LINC01550-201ENST00000499006 TEX14Q8IWB6 1497 aa29.98■■■□□ 2.39
LINC01550-201ENST00000499006 NEO1Q92859 1461 aa29.98■■■□□ 2.39
LINC01550-201ENST00000499006 ZNF644Q9H582 1327 aaPredicted RBP29.95■■■□□ 2.39
LINC01550-201ENST00000499006 ABCC1P33527 1531 aa29.94■■■□□ 2.38
LINC01550-201ENST00000499006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.94■■■□□ 2.38
LINC01550-201ENST00000499006 ZNF777Q9ULD5 760 aaPredicted RBP29.93■■■□□ 2.38
LINC01550-201ENST00000499006 AKNAQ7Z591 1439 aa29.93■■■□□ 2.38
LINC01550-201ENST00000499006 PLEKHH2Q8IVE3 1493 aa29.91■■■□□ 2.38
LINC01550-201ENST00000499006 KIAA1107Q9UPP5 1409 aa29.9■■■□□ 2.38
LINC01550-201ENST00000499006 SYCP2Q9BX26 1530 aa29.89■■■□□ 2.38
LINC01550-201ENST00000499006 ARHGEF12Q9NZN5 1544 aa29.88■■■□□ 2.37
LINC01550-201ENST00000499006 ADGRL1O94910 1474 aa29.88■■■□□ 2.37
LINC01550-201ENST00000499006 ARHGEF5Q12774 1597 aa29.87■■■□□ 2.37
LINC01550-201ENST00000499006 MBD5Q9P267 1494 aa29.87■■■□□ 2.37
LINC01550-201ENST00000499006 FAM50AQ14320 339 aaKnown RBP29.86■■■□□ 2.37
LINC01550-201ENST00000499006 DNMT1P26358 1616 aaKnown RBP29.86■■■□□ 2.37
LINC01550-201ENST00000499006 CROCC2H7BZ55 1655 aa29.83■■■□□ 2.37
LINC01550-201ENST00000499006 SCAPERQ9BY12 1400 aa29.82■■■□□ 2.36
LINC01550-201ENST00000499006 RICTORQ6R327 1708 aa29.81■■■□□ 2.36
LINC01550-201ENST00000499006 HNRNPMP52272 730 aaKnown RBP eCLIP29.8■■■□□ 2.36
LINC01550-201ENST00000499006 TRIM26Q12899 539 aaPredicted RBP29.79■■■□□ 2.36
LINC01550-201ENST00000499006 DAPK1P53355 1430 aa29.77■■■□□ 2.36
LINC01550-201ENST00000499006 TRAPPC8Q9Y2L5 1435 aa29.77■■■□□ 2.36
LINC01550-201ENST00000499006 CCDC141Q6ZP82 1450 aa29.77■■■□□ 2.36
LINC01550-201ENST00000499006 ABCC5O15440 1437 aa29.76■■■□□ 2.35
LINC01550-201ENST00000499006 RSPH4AQ5TD94 716 aa29.75■■■□□ 2.35
LINC01550-201ENST00000499006 DENND4BO75064 1496 aaPredicted RBP29.75■■■□□ 2.35
LINC01550-201ENST00000499006 POGZQ7Z3K3 1410 aa29.75■■■□□ 2.35
LINC01550-201ENST00000499006 FRMPD1Q5SYB0 1578 aa29.74■■■□□ 2.35
LINC01550-201ENST00000499006 ZNF518AQ6AHZ1 1483 aa29.73■■■□□ 2.35
LINC01550-201ENST00000499006 KDM5CP41229 1560 aa29.73■■■□□ 2.35
LINC01550-201ENST00000499006 COL17A1Q9UMD9 1497 aaPredicted RBP29.72■■■□□ 2.35
LINC01550-201ENST00000499006 PTPRKQ15262 1439 aa29.71■■■□□ 2.35
LINC01550-201ENST00000499006 SHANK2Q9UPX8 1470 aa29.7■■■□□ 2.35
LINC01550-201ENST00000499006 MAST1Q9Y2H9 1570 aa29.7■■■□□ 2.34
LINC01550-201ENST00000499006 AFAP1Q8N556 730 aa29.68■■■□□ 2.34
LINC01550-201ENST00000499006 ADGBQ8N7X0 1667 aa29.68■■■□□ 2.34
LINC01550-201ENST00000499006 KDM6BO15054 1643 aa29.67■■■□□ 2.34
LINC01550-201ENST00000499006 RAPGEF3O95398 923 aa29.66■■■□□ 2.34
LINC01550-201ENST00000499006 INO80Q9ULG1 1556 aaPredicted RBP29.65■■■□□ 2.34
LINC01550-201ENST00000499006 ZMYM4Q5VZL5 1548 aa29.65■■■□□ 2.34
LINC01550-201ENST00000499006 ITGAEP38570 1179 aa29.64■■■□□ 2.34
LINC01550-201ENST00000499006 KIDINS220Q9ULH0 1771 aa29.64■■■□□ 2.33
LINC01550-201ENST00000499006 C9orf84Q5VXU9 1444 aa29.63■■■□□ 2.33
LINC01550-201ENST00000499006 HECW2Q9P2P5 1572 aa29.63■■■□□ 2.33
LINC01550-201ENST00000499006 ZFYVE16Q7Z3T8 1539 aa29.62■■■□□ 2.33
LINC01550-201ENST00000499006 TSPY4P0CV99 314 aa29.61■■■□□ 2.33
LINC01550-201ENST00000499006 TSPY10P0CW01 314 aa29.61■■■□□ 2.33
LINC01550-201ENST00000499006 ADGRL2O95490 1459 aa29.6■■■□□ 2.33
LINC01550-201ENST00000499006 MLH3Q9UHC1 1453 aa29.6■■■□□ 2.33
LINC01550-201ENST00000499006 RTEL1-TNFRSF6BF6WH68 1400 aa29.6■■■□□ 2.33
LINC01550-201ENST00000499006 ATP7AQ04656 1500 aa29.59■■■□□ 2.33
LINC01550-201ENST00000499006 PLXNC1O60486 1568 aa29.58■■■□□ 2.33
LINC01550-201ENST00000499006 SPAG9O60271 1321 aaKnown RBP29.58■■■□□ 2.33
LINC01550-201ENST00000499006 ROCK1Q13464 1354 aa29.56■■■□□ 2.32
LINC01550-201ENST00000499006 CHIC2Q9UKJ5 165 aa29.55■■■□□ 2.32
LINC01550-201ENST00000499006 NCOA1Q15788 1441 aa29.54■■■□□ 2.32
LINC01550-201ENST00000499006 MAGI2Q86UL8 1455 aa29.53■■■□□ 2.32
LINC01550-201ENST00000499006 ABCA6Q8N139 1617 aa29.52■■■□□ 2.32
LINC01550-201ENST00000499006 ANKRD30AQ9BXX3 1397 aa29.5■■■□□ 2.31
LINC01550-201ENST00000499006 GCC2Q8IWJ2 1684 aa29.5■■■□□ 2.31
LINC01550-201ENST00000499006 PCGF6Q9BYE7 350 aa29.48■■■□□ 2.31
LINC01550-201ENST00000499006 DIP2CQ9Y2E4 1556 aa29.48■■■□□ 2.31
LINC01550-201ENST00000499006 HFM1A2PYH4 1435 aa29.46■■■□□ 2.31
LINC01550-201ENST00000499006 YEATS2Q9ULM3 1422 aa29.46■■■□□ 2.31
LINC01550-201ENST00000499006 ARHGEF40Q8TER5 1519 aa29.45■■■□□ 2.31
LINC01550-201ENST00000499006 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
LINC01550-201ENST00000499006 NAIPQ13075 1403 aa29.44■■■□□ 2.3
LINC01550-201ENST00000499006 KIF15Q9NS87 1388 aa29.43■■■□□ 2.3
LINC01550-201ENST00000499006 MYT1LQ9UL68 1186 aa29.42■■■□□ 2.3
LINC01550-201ENST00000499006 DUOX2Q9NRD8 1548 aa29.41■■■□□ 2.3
LINC01550-201ENST00000499006 REREQ9P2R6 1566 aa29.38■■■□□ 2.29
LINC01550-201ENST00000499006 ATP10AO60312 1499 aa29.36■■■□□ 2.29
LINC01550-201ENST00000499006 A2MP01023 1474 aa29.36■■■□□ 2.29
LINC01550-201ENST00000499006 DHX29Q7Z478 1369 aaKnown RBP29.34■■■□□ 2.29
LINC01550-201ENST00000499006 SETD5Q9C0A6 1442 aa29.34■■■□□ 2.29
LINC01550-201ENST00000499006 ANKRD50Q9ULJ7 1429 aa29.34■■■□□ 2.29
LINC01550-201ENST00000499006 EIF2AK4Q9P2K8 1649 aaKnown RBP29.33■■■□□ 2.29
LINC01550-201ENST00000499006 SIGLEC1Q9BZZ2 1709 aa29.33■■■□□ 2.29
LINC01550-201ENST00000499006 ERBINQ96RT1 1412 aa29.33■■■□□ 2.29
LINC01550-201ENST00000499006 BCORL1Q5H9F3 1711 aa29.33■■■□□ 2.29
LINC01550-201ENST00000499006 RAB3GAP2Q9H2M9 1393 aa29.26■■■□□ 2.28
LINC01550-201ENST00000499006 AGLP35573 1532 aa29.25■■■□□ 2.27
LINC01550-201ENST00000499006 DEPDC5O75140 1603 aa29.24■■■□□ 2.27
LINC01550-201ENST00000499006 RNF17Q9BXT8 1623 aaKnown RBP29.22■■■□□ 2.27
LINC01550-201ENST00000499006 HRCP23327 699 aa29.21■■■□□ 2.27
LINC01550-201ENST00000499006 UNC13BO14795 1591 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms