RNA–Protein interactions for RNA: ENST00000498820.5

RET-204, Transcript of ret proto-oncogene, humanhuman

TSL 3

Gene RET, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-204ENST00000498820 CDC42BPBQ9Y5S2 1711 aa37.5■■■■□ 3.59
RET-204ENST00000498820 EFCAB2Q5VUJ9 269 aa37.5■■■■□ 3.59
RET-204ENST00000498820 PPARGC1BQ86YN6 1023 aaKnown RBP37.48■■■■□ 3.59
RET-204ENST00000498820 CFAP74Q9C0B2 1584 aa37.47■■■■□ 3.59
RET-204ENST00000498820 AKNAQ7Z591 1439 aa37.46■■■■□ 3.59
RET-204ENST00000498820 KDM6BO15054 1643 aa37.45■■■■□ 3.59
RET-204ENST00000498820 PHLDB1Q86UU1 1377 aa37.44■■■■□ 3.58
RET-204ENST00000498820 COL17A1Q9UMD9 1497 aaPredicted RBP37.44■■■■□ 3.58
RET-204ENST00000498820 CFDP1Q9UEE9 299 aaPredicted RBP37.43■■■■□ 3.58
RET-204ENST00000498820 ITSN2Q9NZM3 1697 aa37.41■■■■□ 3.58
RET-204ENST00000498820 ZNF777Q9ULD5 760 aaPredicted RBP37.4■■■■□ 3.58
RET-204ENST00000498820 ADGRL1O94910 1474 aa37.37■■■■□ 3.57
RET-204ENST00000498820 MYOM3Q5VTT5 1437 aa37.33■■■■□ 3.57
RET-204ENST00000498820 SCAPERQ9BY12 1400 aa37.33■■■■□ 3.57
RET-204ENST00000498820 SAMD9LQ8IVG5 1584 aa37.32■■■■□ 3.56
RET-204ENST00000498820 RAPGEF3O95398 923 aa37.3■■■■□ 3.56
RET-204ENST00000498820 DENND4BO75064 1496 aaPredicted RBP37.29■■■■□ 3.56
RET-204ENST00000498820 ZNF644Q9H582 1327 aaPredicted RBP37.29■■■■□ 3.56
RET-204ENST00000498820 ABCC1P33527 1531 aa37.27■■■■□ 3.56
RET-204ENST00000498820 ARHGEF12Q9NZN5 1544 aa37.24■■■■□ 3.55
RET-204ENST00000498820 MIA2Q96PC5 1412 aa37.22■■■■□ 3.55
RET-204ENST00000498820 FRMPD1Q5SYB0 1578 aa37.21■■■■□ 3.55
RET-204ENST00000498820 SYCP2Q9BX26 1530 aa37.2■■■■□ 3.55
RET-204ENST00000498820 CAMSAP2Q08AD1 1489 aa37.2■■■■□ 3.55
RET-204ENST00000498820 POGZQ7Z3K3 1410 aa37.2■■■■□ 3.55
RET-204ENST00000498820 HNRNPMP52272 730 aaKnown RBP eCLIP37.2■■■■□ 3.55
RET-204ENST00000498820 PLEKHH2Q8IVE3 1493 aa37.2■■■■□ 3.54
RET-204ENST00000498820 RICTORQ6R327 1708 aa37.19■■■■□ 3.54
RET-204ENST00000498820 FGD6Q6ZV73 1430 aa37.18■■■■□ 3.54
RET-204ENST00000498820 KIAA1107Q9UPP5 1409 aa37.17■■■■□ 3.54
RET-204ENST00000498820 TRAPPC8Q9Y2L5 1435 aa37.16■■■■□ 3.54
RET-204ENST00000498820 AFAP1Q8N556 730 aa37.15■■■■□ 3.54
RET-204ENST00000498820 ZNF518AQ6AHZ1 1483 aa37.13■■■■□ 3.53
RET-204ENST00000498820 PTPN23Q9H3S7 1636 aa37.11■■■■□ 3.53
RET-204ENST00000498820 MBD5Q9P267 1494 aa37.09■■■■□ 3.53
RET-204ENST00000498820 ZMYM4Q5VZL5 1548 aa37.05■■■■□ 3.52
RET-204ENST00000498820 TCOF1Q13428 1488 aaKnown RBP37.05■■■■□ 3.52
RET-204ENST00000498820 KDM5CP41229 1560 aa37.04■■■■□ 3.52
RET-204ENST00000498820 FAM50AQ14320 339 aaKnown RBP36.99■■■■□ 3.51
RET-204ENST00000498820 MYT1LQ9UL68 1186 aa36.99■■■■□ 3.51
RET-204ENST00000498820 CCDC141Q6ZP82 1450 aa36.98■■■■□ 3.51
RET-204ENST00000498820 ARHGEF5Q12774 1597 aa36.98■■■■□ 3.51
RET-204ENST00000498820 MAGI2Q86UL8 1455 aa36.96■■■■□ 3.51
RET-204ENST00000498820 SPAG9O60271 1321 aaKnown RBP36.96■■■■□ 3.51
RET-204ENST00000498820 RSPH4AQ5TD94 716 aa36.96■■■■□ 3.51
RET-204ENST00000498820 HECW2Q9P2P5 1572 aa36.95■■■■□ 3.51
RET-204ENST00000498820 YEATS2Q9ULM3 1422 aa36.95■■■■□ 3.51
RET-204ENST00000498820 ZFYVE16Q7Z3T8 1539 aa36.95■■■■□ 3.5
RET-204ENST00000498820 MLH3Q9UHC1 1453 aa36.94■■■■□ 3.5
RET-204ENST00000498820 ARHGEF40Q8TER5 1519 aa36.9■■■■□ 3.5
RET-204ENST00000498820 KIDINS220Q9ULH0 1771 aa36.87■■■■□ 3.49
RET-204ENST00000498820 TSPY4P0CV99 314 aa36.87■■■■□ 3.49
RET-204ENST00000498820 TSPY10P0CW01 314 aa36.87■■■■□ 3.49
RET-204ENST00000498820 INO80Q9ULG1 1556 aaPredicted RBP36.87■■■■□ 3.49
RET-204ENST00000498820 ABCC5O15440 1437 aa36.86■■■■□ 3.49
RET-204ENST00000498820 RRBP1Q9P2E9 1410 aaKnown RBP36.86■■■■□ 3.49
RET-204ENST00000498820 ATP7AQ04656 1500 aa36.86■■■■□ 3.49
RET-204ENST00000498820 DAPK1P53355 1430 aa36.85■■■■□ 3.49
RET-204ENST00000498820 DNMT1P26358 1616 aaKnown RBP36.85■■■■□ 3.49
RET-204ENST00000498820 ABCA6Q8N139 1617 aa36.82■■■■□ 3.49
RET-204ENST00000498820 DIP2CQ9Y2E4 1556 aa36.82■■■■□ 3.48
RET-204ENST00000498820 RTEL1-TNFRSF6BF6WH68 1400 aa36.81■■■■□ 3.48
RET-204ENST00000498820 C9orf84Q5VXU9 1444 aa36.8■■■■□ 3.48
RET-204ENST00000498820 ATP10AO60312 1499 aa36.8■■■■□ 3.48
RET-204ENST00000498820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.79■■■■□ 3.48
RET-204ENST00000498820 CROCC2H7BZ55 1655 aa36.79■■■■□ 3.48
RET-204ENST00000498820 MAST1Q9Y2H9 1570 aa36.77■■■■□ 3.48
RET-204ENST00000498820 SHANK2Q9UPX8 1470 aa36.75■■■■□ 3.47
RET-204ENST00000498820 ITGAEP38570 1179 aa36.73■■■■□ 3.47
RET-204ENST00000498820 CHIC2Q9UKJ5 165 aa36.73■■■■□ 3.47
RET-204ENST00000498820 PTPRKQ15262 1439 aa36.68■■■■□ 3.46
RET-204ENST00000498820 ARID4BQ4LE39 1312 aaPredicted RBP36.68■■■■□ 3.46
RET-204ENST00000498820 SIGLEC1Q9BZZ2 1709 aa36.68■■■■□ 3.46
RET-204ENST00000498820 A2MP01023 1474 aa36.65■■■■□ 3.46
RET-204ENST00000498820 REREQ9P2R6 1566 aa36.65■■■■□ 3.46
RET-204ENST00000498820 ADGBQ8N7X0 1667 aa36.64■■■■□ 3.46
RET-204ENST00000498820 PLXNC1O60486 1568 aa36.62■■■■□ 3.45
RET-204ENST00000498820 RRP7BPQ9NSQ0 103 aa36.61■■■■□ 3.45
RET-204ENST00000498820 ANKRD30AQ9BXX3 1397 aa36.6■■■■□ 3.45
RET-204ENST00000498820 ADGRL2O95490 1459 aa36.58■■■■□ 3.45
RET-204ENST00000498820 DHX29Q7Z478 1369 aaKnown RBP36.58■■■■□ 3.45
RET-204ENST00000498820 KIF15Q9NS87 1388 aa36.57■■■■□ 3.45
RET-204ENST00000498820 NCOA1Q15788 1441 aa36.57■■■■□ 3.44
RET-204ENST00000498820 AGLP35573 1532 aa36.54■■■■□ 3.44
RET-204ENST00000498820 MLECQ14165 292 aa36.53■■■■□ 3.44
RET-204ENST00000498820 DUOX2Q9NRD8 1548 aa36.5■■■■□ 3.43
RET-204ENST00000498820 ROCK1Q13464 1354 aa36.49■■■■□ 3.43
RET-204ENST00000498820 BCORL1Q5H9F3 1711 aa36.48■■■■□ 3.43
RET-204ENST00000498820 KIF3BO15066 747 aa36.44■■■■□ 3.42
RET-204ENST00000498820 KDM4FA0A1W2PPD8 638 aa36.43■■■■□ 3.42
RET-204ENST00000498820 ERBINQ96RT1 1412 aa36.4■■■■□ 3.42
RET-204ENST00000498820 GGT6Q6P531 493 aa36.39■■■■□ 3.42
RET-204ENST00000498820 ADAMTSL3P82987 1691 aa36.38■■■■□ 3.41
RET-204ENST00000498820 EIF2AK4Q9P2K8 1649 aaKnown RBP36.36■■■■□ 3.41
RET-204ENST00000498820 ANKRD50Q9ULJ7 1429 aa36.35■■■■□ 3.41
RET-204ENST00000498820 MADDQ8WXG6 1647 aa36.33■■■■□ 3.41
RET-204ENST00000498820 NAIPQ13075 1403 aa36.28■■■■□ 3.4
RET-204ENST00000498820 RNF17Q9BXT8 1623 aaKnown RBP36.27■■■■□ 3.4
RET-204ENST00000498820 HFM1A2PYH4 1435 aa36.26■■■■□ 3.4
RET-204ENST00000498820 FER1L4A9Z1Z3 1794 aa36.26■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms