RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
PRKCB-210ENST00000498739 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.81
PRKCB-210ENST00000498739 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
PRKCB-210ENST00000498739 SUPT6HQ7KZ85 1726 aaKnown RBP26.32■■□□□ 1.8
PRKCB-210ENST00000498739 KANK4Q5T7N3 995 aaPredicted RBP26.32■■□□□ 1.8
PRKCB-210ENST00000498739 GPATCH8Q9UKJ3 1502 aaKnown RBP26.32■■□□□ 1.8
PRKCB-210ENST00000498739 ADGRL1O94910 1474 aa26.31■■□□□ 1.8
PRKCB-210ENST00000498739 DENND4BO75064 1496 aaPredicted RBP26.3■■□□□ 1.8
PRKCB-210ENST00000498739 NCOA2Q15596 1464 aa26.3■■□□□ 1.8
PRKCB-210ENST00000498739 RAPGEF3O95398 923 aa26.29■■□□□ 1.8
PRKCB-210ENST00000498739 SCAPERQ9BY12 1400 aa26.28■■□□□ 1.8
PRKCB-210ENST00000498739 FRMPD1Q5SYB0 1578 aa26.26■■□□□ 1.79
PRKCB-210ENST00000498739 CFDP1Q9UEE9 299 aaPredicted RBP26.24■■□□□ 1.79
PRKCB-210ENST00000498739 ZNF777Q9ULD5 760 aaPredicted RBP26.24■■□□□ 1.79
PRKCB-210ENST00000498739 ITSN2Q9NZM3 1697 aa26.24■■□□□ 1.79
PRKCB-210ENST00000498739 RICTORQ6R327 1708 aa26.22■■□□□ 1.79
PRKCB-210ENST00000498739 POGZQ7Z3K3 1410 aa26.21■■□□□ 1.79
PRKCB-210ENST00000498739 ABCC1P33527 1531 aa26.2■■□□□ 1.79
PRKCB-210ENST00000498739 SAMD9LQ8IVG5 1584 aa26.2■■□□□ 1.78
PRKCB-210ENST00000498739 ARHGEF12Q9NZN5 1544 aa26.15■■□□□ 1.78
PRKCB-210ENST00000498739 ZNF518AQ6AHZ1 1483 aa26.14■■□□□ 1.78
PRKCB-210ENST00000498739 ZMYM4Q5VZL5 1548 aa26.14■■□□□ 1.77
PRKCB-210ENST00000498739 SYCP2Q9BX26 1530 aa26.13■■□□□ 1.77
PRKCB-210ENST00000498739 PLEKHH2Q8IVE3 1493 aa26.12■■□□□ 1.77
PRKCB-210ENST00000498739 AFAP1Q8N556 730 aa26.11■■□□□ 1.77
PRKCB-210ENST00000498739 TRAPPC8Q9Y2L5 1435 aa26.11■■□□□ 1.77
PRKCB-210ENST00000498739 ZNF644Q9H582 1327 aaPredicted RBP26.11■■□□□ 1.77
PRKCB-210ENST00000498739 MYOM3Q5VTT5 1437 aa26.1■■□□□ 1.77
PRKCB-210ENST00000498739 HNRNPMP52272 730 aaKnown RBP eCLIP26.09■■□□□ 1.771e-6■■■■□ 23.3
PRKCB-210ENST00000498739 KDM5CP41229 1560 aa26.08■■□□□ 1.77
PRKCB-210ENST00000498739 KIAA1107Q9UPP5 1409 aa26.08■■□□□ 1.77
PRKCB-210ENST00000498739 ZFYVE16Q7Z3T8 1539 aa26.08■■□□□ 1.77
PRKCB-210ENST00000498739 CAMSAP2Q08AD1 1489 aa26.07■■□□□ 1.76
PRKCB-210ENST00000498739 MAGI2Q86UL8 1455 aa26.07■■□□□ 1.76
PRKCB-210ENST00000498739 ARHGEF40Q8TER5 1519 aa26.07■■□□□ 1.76
PRKCB-210ENST00000498739 YEATS2Q9ULM3 1422 aa26.05■■□□□ 1.76
PRKCB-210ENST00000498739 MYT1LQ9UL68 1186 aa26.05■■□□□ 1.76
PRKCB-210ENST00000498739 HECW2Q9P2P5 1572 aa26.03■■□□□ 1.76
PRKCB-210ENST00000498739 MIA2Q96PC5 1412 aa26.03■■□□□ 1.76
PRKCB-210ENST00000498739 MBD5Q9P267 1494 aa26■■□□□ 1.75
PRKCB-210ENST00000498739 MLH3Q9UHC1 1453 aa26■■□□□ 1.75
PRKCB-210ENST00000498739 PPARGC1BQ86YN6 1023 aaKnown RBP26■■□□□ 1.75
PRKCB-210ENST00000498739 SPAG9O60271 1321 aaKnown RBP25.96■■□□□ 1.75
PRKCB-210ENST00000498739 FGD6Q6ZV73 1430 aa25.96■■□□□ 1.75
PRKCB-210ENST00000498739 ATP10AO60312 1499 aa25.94■■□□□ 1.74
PRKCB-210ENST00000498739 CCDC141Q6ZP82 1450 aa25.94■■□□□ 1.74
PRKCB-210ENST00000498739 PTPN23Q9H3S7 1636 aa25.94■■□□□ 1.74
PRKCB-210ENST00000498739 DIP2CQ9Y2E4 1556 aa25.94■■□□□ 1.74
PRKCB-210ENST00000498739 ARID4BQ4LE39 1312 aaPredicted RBP25.93■■□□□ 1.74
PRKCB-210ENST00000498739 ABCA6Q8N139 1617 aa25.93■■□□□ 1.74
PRKCB-210ENST00000498739 KIDINS220Q9ULH0 1771 aa25.93■■□□□ 1.74
PRKCB-210ENST00000498739 ARHGEF5Q12774 1597 aa25.92■■□□□ 1.74
PRKCB-210ENST00000498739 C9orf84Q5VXU9 1444 aa25.92■■□□□ 1.74
PRKCB-210ENST00000498739 ATP7AQ04656 1500 aa25.92■■□□□ 1.74
PRKCB-210ENST00000498739 INO80Q9ULG1 1556 aaPredicted RBP25.91■■□□□ 1.74
PRKCB-210ENST00000498739 RSPH4AQ5TD94 716 aa25.91■■□□□ 1.74
PRKCB-210ENST00000498739 KDM4FA0A1W2PPD8 638 aa25.89■■□□□ 1.74
PRKCB-210ENST00000498739 TCOF1Q13428 1488 aaKnown RBP25.88■■□□□ 1.73
PRKCB-210ENST00000498739 SIGLEC1Q9BZZ2 1709 aa25.87■■□□□ 1.73
PRKCB-210ENST00000498739 RTEL1-TNFRSF6BF6WH68 1400 aa25.85■■□□□ 1.73
PRKCB-210ENST00000498739 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
PRKCB-210ENST00000498739 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
PRKCB-210ENST00000498739 REREQ9P2R6 1566 aa25.83■■□□□ 1.73
PRKCB-210ENST00000498739 BCORL1Q5H9F3 1711 aa25.82■■□□□ 1.72
PRKCB-210ENST00000498739 FAM50AQ14320 339 aaKnown RBP25.81■■□□□ 1.72
PRKCB-210ENST00000498739 MLECQ14165 292 aa25.79■■□□□ 1.72
PRKCB-210ENST00000498739 AEBP2Q6ZN18 517 aaPredicted RBP25.79■■□□□ 1.72
PRKCB-210ENST00000498739 MAST1Q9Y2H9 1570 aa25.78■■□□□ 1.72
PRKCB-210ENST00000498739 DNMT1P26358 1616 aaKnown RBP25.78■■□□□ 1.72
PRKCB-210ENST00000498739 ABCC5O15440 1437 aa25.78■■□□□ 1.72
PRKCB-210ENST00000498739 DAPK1P53355 1430 aa25.78■■□□□ 1.72
PRKCB-210ENST00000498739 A2MP01023 1474 aa25.78■■□□□ 1.72
PRKCB-210ENST00000498739 ADGBQ8N7X0 1667 aa25.77■■□□□ 1.72
PRKCB-210ENST00000498739 ADAMTSL3P82987 1691 aa25.76■■□□□ 1.71
PRKCB-210ENST00000498739 CROCC2H7BZ55 1655 aa25.75■■□□□ 1.71
PRKCB-210ENST00000498739 AGLP35573 1532 aa25.75■■□□□ 1.71
PRKCB-210ENST00000498739 PLXNC1O60486 1568 aa25.73■■□□□ 1.71
PRKCB-210ENST00000498739 SHANK2Q9UPX8 1470 aa25.73■■□□□ 1.71
PRKCB-210ENST00000498739 MADDQ8WXG6 1647 aa25.72■■□□□ 1.71
PRKCB-210ENST00000498739 DHX29Q7Z478 1369 aaKnown RBP25.69■■□□□ 1.7
PRKCB-210ENST00000498739 CHIC2Q9UKJ5 165 aa25.67■■□□□ 1.7
PRKCB-210ENST00000498739 RIMS1Q86UR5 1692 aaKnown RBP25.65■■□□□ 1.7
PRKCB-210ENST00000498739 FER1L4A9Z1Z3 1794 aa25.64■■□□□ 1.7
PRKCB-210ENST00000498739 RRBP1Q9P2E9 1410 aaKnown RBP25.64■■□□□ 1.7
PRKCB-210ENST00000498739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.63■■□□□ 1.697e-7■■■■■ 52.8
PRKCB-210ENST00000498739 PTPRMP28827 1452 aa25.63■■□□□ 1.69
PRKCB-210ENST00000498739 KIF15Q9NS87 1388 aa25.62■■□□□ 1.69
PRKCB-210ENST00000498739 RRP7BPQ9NSQ0 103 aa25.62■■□□□ 1.69
PRKCB-210ENST00000498739 ANKRD30AQ9BXX3 1397 aa25.61■■□□□ 1.69
PRKCB-210ENST00000498739 DUOX2Q9NRD8 1548 aa25.6■■□□□ 1.69
PRKCB-210ENST00000498739 KIF3BO15066 747 aa25.6■■□□□ 1.69
PRKCB-210ENST00000498739 ITGAEP38570 1179 aa25.6■■□□□ 1.69
PRKCB-210ENST00000498739 GGT6Q6P531 493 aa25.6■■□□□ 1.69
PRKCB-210ENST00000498739 ESF1Q9H501 851 aaKnown RBP25.59■■□□□ 1.69
PRKCB-210ENST00000498739 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
PRKCB-210ENST00000498739 PTPRKQ15262 1439 aa25.58■■□□□ 1.69
PRKCB-210ENST00000498739 NCOA1Q15788 1441 aa25.56■■□□□ 1.68
PRKCB-210ENST00000498739 PLPPR3Q6T4P5 718 aa25.56■■□□□ 1.68
PRKCB-210ENST00000498739 EIF2AK4Q9P2K8 1649 aaKnown RBP25.54■■□□□ 1.68
PRKCB-210ENST00000498739 ERBINQ96RT1 1412 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms