RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 APLP2Q06481 763 aa25.32■■□□□ 1.64
LMNA-217ENST00000498722 RICTORQ6R327 1708 aa25.3■■□□□ 1.64
LMNA-217ENST00000498722 EFCAB2Q5VUJ9 269 aa25.3■■□□□ 1.64
LMNA-217ENST00000498722 ADGRL1O94910 1474 aa25.29■■□□□ 1.64
LMNA-217ENST00000498722 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
LMNA-217ENST00000498722 MAP3K1Q13233 1512 aa25.27■■□□□ 1.64
LMNA-217ENST00000498722 DENND4BO75064 1496 aaPredicted RBP25.27■■□□□ 1.64
LMNA-217ENST00000498722 CCNB3Q8WWL7 1395 aa25.27■■□□□ 1.64
LMNA-217ENST00000498722 RAPGEF3O95398 923 aa25.27■■□□□ 1.64
LMNA-217ENST00000498722 FRMPD1Q5SYB0 1578 aa25.26■■□□□ 1.63
LMNA-217ENST00000498722 LRRC9Q6ZRR7 1453 aa25.26■■□□□ 1.63
LMNA-217ENST00000498722 GPATCH8Q9UKJ3 1502 aaKnown RBP25.23■■□□□ 1.63
LMNA-217ENST00000498722 SCAPERQ9BY12 1400 aa25.23■■□□□ 1.63
LMNA-217ENST00000498722 NCOA2Q15596 1464 aa25.21■■□□□ 1.63
LMNA-217ENST00000498722 ZNF777Q9ULD5 760 aaPredicted RBP25.21■■□□□ 1.63
LMNA-217ENST00000498722 KANK4Q5T7N3 995 aaPredicted RBP25.18■■□□□ 1.62
LMNA-217ENST00000498722 ABCC1P33527 1531 aa25.18■■□□□ 1.62
LMNA-217ENST00000498722 SAMD9LQ8IVG5 1584 aa25.18■■□□□ 1.62
LMNA-217ENST00000498722 CFDP1Q9UEE9 299 aaPredicted RBP25.17■■□□□ 1.62
LMNA-217ENST00000498722 POGZQ7Z3K3 1410 aa25.17■■□□□ 1.62
LMNA-217ENST00000498722 ZMYM4Q5VZL5 1548 aa25.13■■□□□ 1.61
LMNA-217ENST00000498722 ZNF518AQ6AHZ1 1483 aa25.13■■□□□ 1.61
LMNA-217ENST00000498722 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
LMNA-217ENST00000498722 ARHGEF40Q8TER5 1519 aa25.11■■□□□ 1.61
LMNA-217ENST00000498722 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
LMNA-217ENST00000498722 MYT1LQ9UL68 1186 aa25.1■■□□□ 1.61
LMNA-217ENST00000498722 ARHGEF12Q9NZN5 1544 aa25.08■■□□□ 1.61
LMNA-217ENST00000498722 PLEKHH2Q8IVE3 1493 aa25.08■■□□□ 1.61
LMNA-217ENST00000498722 KDM5CP41229 1560 aa25.07■■□□□ 1.6
LMNA-217ENST00000498722 HECW2Q9P2P5 1572 aa25.07■■□□□ 1.6
LMNA-217ENST00000498722 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
LMNA-217ENST00000498722 TRAPPC8Q9Y2L5 1435 aa25.05■■□□□ 1.6
LMNA-217ENST00000498722 MAGI2Q86UL8 1455 aa25.05■■□□□ 1.6
LMNA-217ENST00000498722 HNRNPMP52272 730 aaKnown RBP eCLIP25.04■■□□□ 1.6
LMNA-217ENST00000498722 CAMSAP2Q08AD1 1489 aa25.03■■□□□ 1.6
LMNA-217ENST00000498722 ZNF644Q9H582 1327 aaPredicted RBP25.03■■□□□ 1.6
LMNA-217ENST00000498722 YEATS2Q9ULM3 1422 aa25.03■■□□□ 1.6
LMNA-217ENST00000498722 MYOM3Q5VTT5 1437 aa25.01■■□□□ 1.59
LMNA-217ENST00000498722 KIAA1107Q9UPP5 1409 aa25■■□□□ 1.59
LMNA-217ENST00000498722 KIDINS220Q9ULH0 1771 aa24.99■■□□□ 1.59
LMNA-217ENST00000498722 ARID4BQ4LE39 1312 aaPredicted RBP24.98■■□□□ 1.59
LMNA-217ENST00000498722 ABCA6Q8N139 1617 aa24.98■■□□□ 1.59
LMNA-217ENST00000498722 DIP2CQ9Y2E4 1556 aa24.95■■□□□ 1.58
LMNA-217ENST00000498722 SIGLEC1Q9BZZ2 1709 aa24.95■■□□□ 1.58
LMNA-217ENST00000498722 MLH3Q9UHC1 1453 aa24.95■■□□□ 1.58
LMNA-217ENST00000498722 ATP10AO60312 1499 aa24.94■■□□□ 1.58
LMNA-217ENST00000498722 SPAG9O60271 1321 aaKnown RBP24.94■■□□□ 1.58
LMNA-217ENST00000498722 PTPN23Q9H3S7 1636 aa24.93■■□□□ 1.58
LMNA-217ENST00000498722 MIA2Q96PC5 1412 aa24.93■■□□□ 1.58
LMNA-217ENST00000498722 ATP7AQ04656 1500 aa24.92■■□□□ 1.58
LMNA-217ENST00000498722 KDM4FA0A1W2PPD8 638 aa24.92■■□□□ 1.58
LMNA-217ENST00000498722 BCORL1Q5H9F3 1711 aa24.92■■□□□ 1.58
LMNA-217ENST00000498722 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
LMNA-217ENST00000498722 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
LMNA-217ENST00000498722 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
LMNA-217ENST00000498722 MBD5Q9P267 1494 aa24.91■■□□□ 1.58
LMNA-217ENST00000498722 CCDC141Q6ZP82 1450 aa24.9■■□□□ 1.58
LMNA-217ENST00000498722 ARHGEF5Q12774 1597 aa24.89■■□□□ 1.57
LMNA-217ENST00000498722 FGD6Q6ZV73 1430 aa24.86■■□□□ 1.57
LMNA-217ENST00000498722 ADGBQ8N7X0 1667 aa24.86■■□□□ 1.57
LMNA-217ENST00000498722 ADAMTSL3P82987 1691 aa24.85■■□□□ 1.57
LMNA-217ENST00000498722 FER1L4A9Z1Z3 1794 aa24.83■■□□□ 1.57
LMNA-217ENST00000498722 RSPH4AQ5TD94 716 aa24.83■■□□□ 1.56
LMNA-217ENST00000498722 REREQ9P2R6 1566 aa24.83■■□□□ 1.56
LMNA-217ENST00000498722 MADDQ8WXG6 1647 aa24.82■■□□□ 1.56
LMNA-217ENST00000498722 CROCC2H7BZ55 1655 aa24.82■■□□□ 1.56
LMNA-217ENST00000498722 MLECQ14165 292 aa24.82■■□□□ 1.56
LMNA-217ENST00000498722 RIMS1Q86UR5 1692 aaKnown RBP24.8■■□□□ 1.56
LMNA-217ENST00000498722 TSPY4P0CV99 314 aa24.8■■□□□ 1.56
LMNA-217ENST00000498722 TSPY10P0CW01 314 aa24.8■■□□□ 1.56
LMNA-217ENST00000498722 TCOF1Q13428 1488 aaKnown RBP24.78■■□□□ 1.56
LMNA-217ENST00000498722 DNMT1P26358 1616 aaKnown RBP24.77■■□□□ 1.56
LMNA-217ENST00000498722 RTEL1-TNFRSF6BF6WH68 1400 aa24.77■■□□□ 1.56
LMNA-217ENST00000498722 FAM50AQ14320 339 aaKnown RBP24.77■■□□□ 1.56
LMNA-217ENST00000498722 A2MP01023 1474 aa24.75■■□□□ 1.55
LMNA-217ENST00000498722 MAST1Q9Y2H9 1570 aa24.75■■□□□ 1.55
LMNA-217ENST00000498722 AGLP35573 1532 aa24.73■■□□□ 1.55
LMNA-217ENST00000498722 PLXNC1O60486 1568 aa24.72■■□□□ 1.55
LMNA-217ENST00000498722 DAPK1P53355 1430 aa24.7■■□□□ 1.54
LMNA-217ENST00000498722 ABCC5O15440 1437 aa24.68■■□□□ 1.54
LMNA-217ENST00000498722 SHANK2Q9UPX8 1470 aa24.68■■□□□ 1.54
LMNA-217ENST00000498722 PTPRMP28827 1452 aa24.67■■□□□ 1.54
LMNA-217ENST00000498722 PLPPR3Q6T4P5 718 aa24.66■■□□□ 1.54
LMNA-217ENST00000498722 TRIM26Q12899 539 aaPredicted RBP24.65■■□□□ 1.54
LMNA-217ENST00000498722 ESF1Q9H501 851 aaKnown RBP24.64■■□□□ 1.54
LMNA-217ENST00000498722 DHX29Q7Z478 1369 aaKnown RBP24.64■■□□□ 1.53
LMNA-217ENST00000498722 CHIC2Q9UKJ5 165 aa24.62■■□□□ 1.53
LMNA-217ENST00000498722 CLTCQ00610 1675 aaKnown RBP24.6■■□□□ 1.53
LMNA-217ENST00000498722 GGT6Q6P531 493 aa24.6■■□□□ 1.53
LMNA-217ENST00000498722 DUOX2Q9NRD8 1548 aa24.58■■□□□ 1.53
LMNA-217ENST00000498722 KIF3BO15066 747 aa24.58■■□□□ 1.52
LMNA-217ENST00000498722 RRP7BPQ9NSQ0 103 aa24.58■■□□□ 1.52
LMNA-217ENST00000498722 EIF2AK4Q9P2K8 1649 aaKnown RBP24.58■■□□□ 1.52
LMNA-217ENST00000498722 KIF15Q9NS87 1388 aa24.57■■□□□ 1.52
LMNA-217ENST00000498722 C3P01024 1663 aa24.57■■□□□ 1.52
LMNA-217ENST00000498722 ITGAEP38570 1179 aa24.57■■□□□ 1.52
LMNA-217ENST00000498722 ANKRD30AQ9BXX3 1397 aa24.56■■□□□ 1.52
LMNA-217ENST00000498722 MROH2AA6NES4 1674 aa24.55■■□□□ 1.52
LMNA-217ENST00000498722 PCGF6Q9BYE7 350 aa24.54■■□□□ 1.52
LMNA-217ENST00000498722 CNTLNQ9NXG0 1405 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms