RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 RIMS1Q86UR5 1692 aaKnown RBP18.06■□□□□ 0.48
LSAMP-206ENST00000498645 CLIP1P30622 1438 aa18.05■□□□□ 0.48
LSAMP-206ENST00000498645 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
LSAMP-206ENST00000498645 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
LSAMP-206ENST00000498645 POGZQ7Z3K3 1410 aa18.04■□□□□ 0.48
LSAMP-206ENST00000498645 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
LSAMP-206ENST00000498645 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
LSAMP-206ENST00000498645 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
LSAMP-206ENST00000498645 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
LSAMP-206ENST00000498645 MAGI2Q86UL8 1455 aa18■□□□□ 0.47
LSAMP-206ENST00000498645 CASKIN1Q8WXD9 1431 aa17.99■□□□□ 0.47
LSAMP-206ENST00000498645 CCDC18Q5T9S5 1454 aa17.99■□□□□ 0.47
LSAMP-206ENST00000498645 MLECQ14165 292 aa17.98■□□□□ 0.47
LSAMP-206ENST00000498645 ILDR1Q86SU0 546 aaPredicted RBP17.97■□□□□ 0.47
LSAMP-206ENST00000498645 CDC42BPBQ9Y5S2 1711 aa17.97■□□□□ 0.47
LSAMP-206ENST00000498645 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.47
LSAMP-206ENST00000498645 PREX2Q70Z35 1606 aa17.95■□□□□ 0.46
LSAMP-206ENST00000498645 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
LSAMP-206ENST00000498645 ZNF518AQ6AHZ1 1483 aa17.95■□□□□ 0.46
LSAMP-206ENST00000498645 FYCO1Q9BQS8 1478 aa17.95■□□□□ 0.46
LSAMP-206ENST00000498645 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
LSAMP-206ENST00000498645 ATP10AO60312 1499 aa17.93■□□□□ 0.46
LSAMP-206ENST00000498645 AFAP1Q8N556 730 aa17.92■□□□□ 0.46
LSAMP-206ENST00000498645 CDC42BPAQ5VT25 1732 aa17.91■□□□□ 0.46
LSAMP-206ENST00000498645 KDM5CP41229 1560 aa17.91■□□□□ 0.46
LSAMP-206ENST00000498645 LMTK3Q96Q04 1460 aa17.9■□□□□ 0.46
LSAMP-206ENST00000498645 ITSN2Q9NZM3 1697 aa17.9■□□□□ 0.46
LSAMP-206ENST00000498645 ABCC1P33527 1531 aa17.88■□□□□ 0.45
LSAMP-206ENST00000498645 DIP2CQ9Y2E4 1556 aa17.87■□□□□ 0.45
LSAMP-206ENST00000498645 ABCA6Q8N139 1617 aa17.87■□□□□ 0.45
LSAMP-206ENST00000498645 ARHGEF12Q9NZN5 1544 aa17.86■□□□□ 0.45
LSAMP-206ENST00000498645 TRAPPC8Q9Y2L5 1435 aa17.84■□□□□ 0.45
LSAMP-206ENST00000498645 HSPA2P54652 639 aa17.84■□□□□ 0.45
LSAMP-206ENST00000498645 ZNF777Q9ULD5 760 aaPredicted RBP17.84■□□□□ 0.45
LSAMP-206ENST00000498645 MLH3Q9UHC1 1453 aa17.82■□□□□ 0.44
LSAMP-206ENST00000498645 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
LSAMP-206ENST00000498645 SYCP2Q9BX26 1530 aa17.8■□□□□ 0.44
LSAMP-206ENST00000498645 KIDINS220Q9ULH0 1771 aa17.8■□□□□ 0.44
LSAMP-206ENST00000498645 REREQ9P2R6 1566 aa17.79■□□□□ 0.44
LSAMP-206ENST00000498645 CEBPAP49715 358 aaPredicted RBP17.79■□□□□ 0.44
LSAMP-206ENST00000498645 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
LSAMP-206ENST00000498645 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
LSAMP-206ENST00000498645 PREX1Q8TCU6 1659 aa17.78■□□□□ 0.44
LSAMP-206ENST00000498645 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.43
LSAMP-206ENST00000498645 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
LSAMP-206ENST00000498645 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.43
LSAMP-206ENST00000498645 ESF1Q9H501 851 aaKnown RBP17.74■□□□□ 0.43
LSAMP-206ENST00000498645 CFDP1Q9UEE9 299 aaPredicted RBP17.74■□□□□ 0.43
LSAMP-206ENST00000498645 C3P01024 1663 aa17.74■□□□□ 0.43
LSAMP-206ENST00000498645 AGLP35573 1532 aa17.73■□□□□ 0.43
LSAMP-206ENST00000498645 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
LSAMP-206ENST00000498645 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
LSAMP-206ENST00000498645 SUPT6HQ7KZ85 1726 aaKnown RBP17.72■□□□□ 0.43
LSAMP-206ENST00000498645 TIAM1Q13009 1591 aa17.71■□□□□ 0.43
LSAMP-206ENST00000498645 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
LSAMP-206ENST00000498645 PLEKHH2Q8IVE3 1493 aa17.7■□□□□ 0.42
LSAMP-206ENST00000498645 FBXO41Q8TF61 875 aa17.7■□□□□ 0.42
LSAMP-206ENST00000498645 UHRF1BP1Q6BDS2 1440 aa17.69■□□□□ 0.42
LSAMP-206ENST00000498645 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
LSAMP-206ENST00000498645 SETD1BQ9UPS6 1966 aaKnown RBP17.68■□□□□ 0.42
LSAMP-206ENST00000498645 KIAA1107Q9UPP5 1409 aa17.68■□□□□ 0.42
LSAMP-206ENST00000498645 ZNF644Q9H582 1327 aaPredicted RBP17.66■□□□□ 0.42
LSAMP-206ENST00000498645 CNTLNQ9NXG0 1405 aa17.64■□□□□ 0.41
LSAMP-206ENST00000498645 STRCQ7RTU9 1775 aa17.63■□□□□ 0.41
LSAMP-206ENST00000498645 A2MP01023 1474 aa17.63■□□□□ 0.41
LSAMP-206ENST00000498645 CLTCQ00610 1675 aaKnown RBP17.63■□□□□ 0.41
LSAMP-206ENST00000498645 PLXNC1O60486 1568 aa17.62■□□□□ 0.41
LSAMP-206ENST00000498645 MROH2AA6NES4 1674 aa17.62■□□□□ 0.41
LSAMP-206ENST00000498645 ADGBQ8N7X0 1667 aa17.62■□□□□ 0.41
LSAMP-206ENST00000498645 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
LSAMP-206ENST00000498645 NCOA2Q15596 1464 aa17.6■□□□□ 0.41
LSAMP-206ENST00000498645 MBD5Q9P267 1494 aa17.58■□□□□ 0.41
LSAMP-206ENST00000498645 GGT6Q6P531 493 aa17.58■□□□□ 0.4
LSAMP-206ENST00000498645 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
LSAMP-206ENST00000498645 CERKQ8TCT0 537 aa17.57■□□□□ 0.4
LSAMP-206ENST00000498645 ZMYM3Q14202 1370 aa17.56■□□□□ 0.4
LSAMP-206ENST00000498645 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
LSAMP-206ENST00000498645 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
LSAMP-206ENST00000498645 CCDC141Q6ZP82 1450 aa17.55■□□□□ 0.4
LSAMP-206ENST00000498645 NPATQ14207 1427 aa17.54■□□□□ 0.4
LSAMP-206ENST00000498645 MYO3AQ8NEV4 1616 aa17.53■□□□□ 0.4
LSAMP-206ENST00000498645 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.4
LSAMP-206ENST00000498645 LRRC9Q6ZRR7 1453 aa17.51■□□□□ 0.39
LSAMP-206ENST00000498645 CAMSAP1Q5T5Y3 1602 aa17.51■□□□□ 0.39
LSAMP-206ENST00000498645 NCOA1Q15788 1441 aa17.5■□□□□ 0.39
LSAMP-206ENST00000498645 DHX29Q7Z478 1369 aaKnown RBP17.49■□□□□ 0.39
LSAMP-206ENST00000498645 ZNF142P52746 1687 aaPredicted RBP17.48■□□□□ 0.39
LSAMP-206ENST00000498645 PTPRTO14522 1441 aa17.48■□□□□ 0.39
LSAMP-206ENST00000498645 PTPRKQ15262 1439 aa17.48■□□□□ 0.39
LSAMP-206ENST00000498645 KIF3BO15066 747 aa17.47■□□□□ 0.39
LSAMP-206ENST00000498645 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
LSAMP-206ENST00000498645 CEP170BQ9Y4F5 1589 aaPredicted RBP17.47■□□□□ 0.39
LSAMP-206ENST00000498645 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
LSAMP-206ENST00000498645 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
LSAMP-206ENST00000498645 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
LSAMP-206ENST00000498645 RSPH4AQ5TD94 716 aa17.44■□□□□ 0.38
LSAMP-206ENST00000498645 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
LSAMP-206ENST00000498645 KDM5DQ9BY66 1539 aa17.43■□□□□ 0.38
LSAMP-206ENST00000498645 NCKAP5LQ9HCH0 1330 aa17.43■□□□□ 0.38
LSAMP-206ENST00000498645 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms