RNA–Protein interactions for RNA: ENST00000498468.1

GBE1-206, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

TSL 3

Gene GBE1, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-206ENST00000498468 DCAF8L2P0C7V8 631 aa13.09□□□□□ -0.31
GBE1-206ENST00000498468 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
GBE1-206ENST00000498468 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
GBE1-206ENST00000498468 C2orf72A6NCS6 295 aa13.07□□□□□ -0.32
GBE1-206ENST00000498468 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
GBE1-206ENST00000498468 HOXB1P14653 301 aaPredicted RBP13.04□□□□□ -0.32
GBE1-206ENST00000498468 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
GBE1-206ENST00000498468 GTPBP6O43824 516 aaPredicted RBP13.03□□□□□ -0.32
GBE1-206ENST00000498468 EMP3P54852 163 aa13.02□□□□□ -0.33
GBE1-206ENST00000498468 CDAN1Q8IWY9 1227 aa13.02□□□□□ -0.33
GBE1-206ENST00000498468 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
GBE1-206ENST00000498468 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
GBE1-206ENST00000498468 TMC2Q8TDI7 906 aa13□□□□□ -0.33
GBE1-206ENST00000498468 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
GBE1-206ENST00000498468 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
GBE1-206ENST00000498468 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
GBE1-206ENST00000498468 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
GBE1-206ENST00000498468 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
GBE1-206ENST00000498468 HS3ST6Q96QI5 342 aa12.94□□□□□ -0.34
GBE1-206ENST00000498468 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
GBE1-206ENST00000498468 SLC34A2O95436 690 aa12.92□□□□□ -0.34
GBE1-206ENST00000498468 FOXK1P85037 733 aa12.91□□□□□ -0.34
GBE1-206ENST00000498468 ARSIQ5FYB1 569 aa12.9□□□□□ -0.34
GBE1-206ENST00000498468 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
GBE1-206ENST00000498468 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
GBE1-206ENST00000498468 DSG2Q14126 1118 aa12.87□□□□□ -0.35
GBE1-206ENST00000498468 PLPP6Q8IY26 295 aa12.86□□□□□ -0.35
GBE1-206ENST00000498468 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.35
GBE1-206ENST00000498468 ERBB3P21860 1342 aa12.86□□□□□ -0.35
GBE1-206ENST00000498468 NCKAP5LQ9HCH0 1330 aa12.85□□□□□ -0.35
GBE1-206ENST00000498468 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
GBE1-206ENST00000498468 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
GBE1-206ENST00000498468 KRTAP3-3Q9BYR6 98 aa12.82□□□□□ -0.36
GBE1-206ENST00000498468 KRTAP3-2Q9BYR7 98 aa12.82□□□□□ -0.36
GBE1-206ENST00000498468 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
GBE1-206ENST00000498468 NUDT7P0C024 238 aa12.79□□□□□ -0.36
GBE1-206ENST00000498468 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
GBE1-206ENST00000498468 PDE4AP27815 886 aa12.78□□□□□ -0.36
GBE1-206ENST00000498468 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
GBE1-206ENST00000498468 PPP1R15BQ5SWA1 713 aa12.76□□□□□ -0.37
GBE1-206ENST00000498468 CADPS2Q86UW7 1296 aa12.76□□□□□ -0.37
GBE1-206ENST00000498468 ZNF687Q8N1G0 1237 aa12.75□□□□□ -0.37
GBE1-206ENST00000498468 MFSD10Q14728 455 aa12.72□□□□□ -0.37
GBE1-206ENST00000498468 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
GBE1-206ENST00000498468 LHX6Q9UPM6 363 aa12.72□□□□□ -0.37
GBE1-206ENST00000498468 SPNS2Q8IVW8 549 aa12.71□□□□□ -0.37
GBE1-206ENST00000498468 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
GBE1-206ENST00000498468 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
GBE1-206ENST00000498468 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
GBE1-206ENST00000498468 DDX27Q96GQ7 796 aaKnown RBP12.69□□□□□ -0.38
GBE1-206ENST00000498468 TBC1D12O60347 775 aa12.67□□□□□ -0.38
GBE1-206ENST00000498468 UPF1Q92900 1129 aaKnown RBP eCLIP12.64□□□□□ -0.39
GBE1-206ENST00000498468 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
GBE1-206ENST00000498468 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
GBE1-206ENST00000498468 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
GBE1-206ENST00000498468 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
GBE1-206ENST00000498468 EMILIN3Q9NT22 766 aa12.6□□□□□ -0.39
GBE1-206ENST00000498468 CFAP44Q96MT7 982 aa12.59□□□□□ -0.39
GBE1-206ENST00000498468 PBX2P40425 430 aa12.57□□□□□ -0.4
GBE1-206ENST00000498468 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
GBE1-206ENST00000498468 ANO8Q9HCE9 1232 aaPredicted RBP12.55□□□□□ -0.4
GBE1-206ENST00000498468 LSM11P83369 360 aaKnown RBP eCLIP12.54□□□□□ -0.4
GBE1-206ENST00000498468 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
GBE1-206ENST00000498468 EVI5O60447 810 aa12.52□□□□□ -0.41
GBE1-206ENST00000498468 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
GBE1-206ENST00000498468 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
GBE1-206ENST00000498468 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
GBE1-206ENST00000498468 FOSBP53539 338 aa12.48□□□□□ -0.41
GBE1-206ENST00000498468 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
GBE1-206ENST00000498468 ZNF454Q8N9F8 522 aa12.46□□□□□ -0.41
GBE1-206ENST00000498468 JPH4Q96JJ6 628 aa12.45□□□□□ -0.42
GBE1-206ENST00000498468 PSEN2P49810 448 aa12.44□□□□□ -0.42
GBE1-206ENST00000498468 PTGER2P43116 358 aa12.43□□□□□ -0.42
GBE1-206ENST00000498468 DPYSL4O14531 572 aa12.42□□□□□ -0.42
GBE1-206ENST00000498468 DMRTA1Q5VZB9 504 aa12.42□□□□□ -0.42
GBE1-206ENST00000498468 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
GBE1-206ENST00000498468 MYT1LQ9UL68 1186 aa12.41□□□□□ -0.42
GBE1-206ENST00000498468 ADGRD1Q6QNK2 874 aa12.39□□□□□ -0.43
GBE1-206ENST00000498468 KCNK17Q96T54 332 aa12.39□□□□□ -0.43
GBE1-206ENST00000498468 TK2O00142 265 aa12.38□□□□□ -0.43
GBE1-206ENST00000498468 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
GBE1-206ENST00000498468 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
GBE1-206ENST00000498468 TSHZ2Q9NRE2 1034 aa12.38□□□□□ -0.43
GBE1-206ENST00000498468 E2F4Q16254 413 aa12.37□□□□□ -0.43
GBE1-206ENST00000498468 PCDHGA10Q9Y5H3 936 aa12.37□□□□□ -0.43
GBE1-206ENST00000498468 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
GBE1-206ENST00000498468 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
GBE1-206ENST00000498468 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
GBE1-206ENST00000498468 HRO43593 1189 aa12.34□□□□□ -0.43
GBE1-206ENST00000498468 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
GBE1-206ENST00000498468 PHF14O94880 888 aa12.33□□□□□ -0.44
GBE1-206ENST00000498468 PDIA6Q15084 440 aa12.33□□□□□ -0.44
GBE1-206ENST00000498468 PTPREP23469 700 aa12.32□□□□□ -0.44
GBE1-206ENST00000498468 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
GBE1-206ENST00000498468 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
GBE1-206ENST00000498468 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
GBE1-206ENST00000498468 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
GBE1-206ENST00000498468 SPDYE16A6NNV3 312 aaPredicted RBP12.28□□□□□ -0.44
GBE1-206ENST00000498468 ZBED2Q9BTP6 218 aa12.28□□□□□ -0.44
GBE1-206ENST00000498468 EPAS1Q99814 870 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms