RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 VGFO15240 615 aaPredicted RBP8.56□□□□□ -1.04
RBM39-242ENST00000498280 ANKRD13DQ6ZTN6 518 aa8.55□□□□□ -1.04
RBM39-242ENST00000498280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.53□□□□□ -1.04
RBM39-242ENST00000498280 PTGER2P43116 358 aa8.53□□□□□ -1.04
RBM39-242ENST00000498280 ZFP91Q96JP5 570 aaPredicted RBP8.53□□□□□ -1.04
RBM39-242ENST00000498280 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
RBM39-242ENST00000498280 MS4A4AQ96JQ5 239 aa8.51□□□□□ -1.05
RBM39-242ENST00000498280 KHSRPQ92945 711 aaKnown RBP eCLIP8.5□□□□□ -1.051e-12■□□□□ 8.3
RBM39-242ENST00000498280 TAOK2Q9UL54 1235 aa8.5□□□□□ -1.05
RBM39-242ENST00000498280 PHF8Q9UPP1 1060 aa8.5□□□□□ -1.05
RBM39-242ENST00000498280 NLRP6P59044 892 aa8.47□□□□□ -1.05
RBM39-242ENST00000498280 LSM11P83369 360 aaKnown RBP eCLIP8.47□□□□□ -1.051e-13■□□□□ 8.6
RBM39-242ENST00000498280 ZNF316A6NFI3 1004 aaPredicted RBP8.46□□□□□ -1.06
RBM39-242ENST00000498280 BCL11BQ9C0K0 894 aaPredicted RBP8.43□□□□□ -1.06
RBM39-242ENST00000498280 PLA2G2EQ9NZK7 142 aa8.42□□□□□ -1.06
RBM39-242ENST00000498280 FBXO22Q8NEZ5 403 aa8.4□□□□□ -1.06
RBM39-242ENST00000498280 PBX2P40425 430 aa8.39□□□□□ -1.07
RBM39-242ENST00000498280 AXIN2Q9Y2T1 843 aa8.39□□□□□ -1.07
RBM39-242ENST00000498280 STK24Q9Y6E0 443 aa8.39□□□□□ -1.07
RBM39-242ENST00000498280 PKD2Q13563 968 aa8.38□□□□□ -1.07
RBM39-242ENST00000498280 POTEEQ6S8J3 1075 aa8.38□□□□□ -1.07
RBM39-242ENST00000498280 NUDT7P0C024 238 aa8.37□□□□□ -1.07
RBM39-242ENST00000498280 STK25O00506 426 aa8.36□□□□□ -1.07
RBM39-242ENST00000498280 RGL2O15211 777 aa8.35□□□□□ -1.07
RBM39-242ENST00000498280 MFRPQ9BY79 579 aa8.35□□□□□ -1.07
RBM39-242ENST00000498280 C2orf72A6NCS6 295 aa8.34□□□□□ -1.07
RBM39-242ENST00000498280 KIF3CO14782 793 aa8.34□□□□□ -1.07
RBM39-242ENST00000498280 ECM2O94769 699 aaPredicted RBP8.34□□□□□ -1.07
RBM39-242ENST00000498280 HCSTQ9UBK5 93 aa8.34□□□□□ -1.07
RBM39-242ENST00000498280 LHX6Q9UPM6 363 aa8.33□□□□□ -1.08
RBM39-242ENST00000498280 TMC2Q8TDI7 906 aa8.32□□□□□ -1.08
RBM39-242ENST00000498280 SLC34A2O95436 690 aa8.31□□□□□ -1.08
RBM39-242ENST00000498280 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
RBM39-242ENST00000498280 PSDA5PKW4 1024 aaPredicted RBP8.29□□□□□ -1.08
RBM39-242ENST00000498280 ADGRD1Q6QNK2 874 aa8.28□□□□□ -1.08
RBM39-242ENST00000498280 ARHGAP33O14559 1287 aa8.24□□□□□ -1.09
RBM39-242ENST00000498280 PPP1R37O75864 691 aa8.23□□□□□ -1.09
RBM39-242ENST00000498280 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
RBM39-242ENST00000498280 KCTD12Q96CX2 325 aaKnown RBP8.21□□□□□ -1.1
RBM39-242ENST00000498280 TK2O00142 265 aa8.2□□□□□ -1.1
RBM39-242ENST00000498280 HRO43593 1189 aa8.2□□□□□ -1.1
RBM39-242ENST00000498280 PSEN2P49810 448 aa8.2□□□□□ -1.1
RBM39-242ENST00000498280 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
RBM39-242ENST00000498280 KCNH8Q96L42 1107 aa8.18□□□□□ -1.1
RBM39-242ENST00000498280 PTCD2Q8WV60 388 aaKnown RBP8.16□□□□□ -1.1
RBM39-242ENST00000498280 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
RBM39-242ENST00000498280 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
RBM39-242ENST00000498280 TBC1D12O60347 775 aa8.14□□□□□ -1.11
RBM39-242ENST00000498280 FOXK1P85037 733 aa8.14□□□□□ -1.11
RBM39-242ENST00000498280 PLPP6Q8IY26 295 aa8.13□□□□□ -1.11
RBM39-242ENST00000498280 PTPN5P54829 565 aa8.12□□□□□ -1.11
RBM39-242ENST00000498280 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
RBM39-242ENST00000498280 KCNK17Q96T54 332 aa8.1□□□□□ -1.11
RBM39-242ENST00000498280 GPHNQ9NQX3 736 aaPredicted RBP8.1□□□□□ -1.11
RBM39-242ENST00000498280 NKX1-1Q15270 411 aaPredicted RBP8.09□□□□□ -1.11
RBM39-242ENST00000498280 HS6ST3Q8IZP7 471 aa8.09□□□□□ -1.11
RBM39-242ENST00000498280 CHGAP10645 457 aaKnown RBP8.08□□□□□ -1.12
RBM39-242ENST00000498280 DSG2Q14126 1118 aa8.08□□□□□ -1.12
RBM39-242ENST00000498280 RGS20O76081 388 aa8.06□□□□□ -1.12
RBM39-242ENST00000498280 VPS9D1Q9Y2B5 631 aa8.06□□□□□ -1.12
RBM39-242ENST00000498280 RYDENQ9NUL5 291 aaKnown RBP8.04□□□□□ -1.12
RBM39-242ENST00000498280 A0A0G2JS52 829 aa8.03□□□□□ -1.12
RBM39-242ENST00000498280 IFFO2Q5TF58 517 aa8.03□□□□□ -1.12
RBM39-242ENST00000498280 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
RBM39-242ENST00000498280 UPF1Q92900 1129 aaKnown RBP eCLIP8.02□□□□□ -1.13
RBM39-242ENST00000498280 THSD4Q6ZMP0 1018 aa8.01□□□□□ -1.13
RBM39-242ENST00000498280 OXER1Q8TDS5 423 aa8.01□□□□□ -1.13
RBM39-242ENST00000498280 SLC4A5Q9BY07 1137 aa8.01□□□□□ -1.13
RBM39-242ENST00000498280 BCL2L12Q9HB09 334 aa8.01□□□□□ -1.13
RBM39-242ENST00000498280 GOLGA8CPA6NN73 597 aa7.99□□□□□ -1.13
RBM39-242ENST00000498280 PTPREP23469 700 aa7.99□□□□□ -1.13
RBM39-242ENST00000498280 PPP1R15BQ5SWA1 713 aa7.98□□□□□ -1.13
RBM39-242ENST00000498280 WNT2BQ93097 391 aa7.97□□□□□ -1.13
RBM39-242ENST00000498280 JPH4Q96JJ6 628 aa7.97□□□□□ -1.13
RBM39-242ENST00000498280 NBPF3Q9H094 633 aa7.97□□□□□ -1.13
RBM39-242ENST00000498280 CRISPLD2Q9H0B8 497 aa7.97□□□□□ -1.13
RBM39-242ENST00000498280 BHMG1C9JSJ3 638 aaPredicted RBP7.96□□□□□ -1.14
RBM39-242ENST00000498280 FOSBP53539 338 aa7.96□□□□□ -1.14
RBM39-242ENST00000498280 MRPL50Q8N5N7 158 aaKnown RBP7.96□□□□□ -1.14
RBM39-242ENST00000498280 DNAJC5Q9H3Z4 198 aa7.96□□□□□ -1.14
RBM39-242ENST00000498280 ZBED2Q9BTP6 218 aa7.94□□□□□ -1.14
RBM39-242ENST00000498280 GTPBP6O43824 516 aaPredicted RBP7.93□□□□□ -1.14
RBM39-242ENST00000498280 Q6ZNB5 142 aa7.93□□□□□ -1.14
RBM39-242ENST00000498280 ZDHHC16Q969W1 377 aa7.92□□□□□ -1.14
RBM39-242ENST00000498280 NCKAP5LQ9HCH0 1330 aa7.92□□□□□ -1.14
RBM39-242ENST00000498280 EVI5O60447 810 aa7.9□□□□□ -1.14
RBM39-242ENST00000498280 PDE4AP27815 886 aa7.9□□□□□ -1.14
RBM39-242ENST00000498280 ADAM33Q9BZ11 813 aa7.88□□□□□ -1.15
RBM39-242ENST00000498280 ANO8Q9HCE9 1232 aaPredicted RBP7.88□□□□□ -1.15
RBM39-242ENST00000498280 PPP1R3GB7ZBB8 358 aa7.87□□□□□ -1.15
RBM39-242ENST00000498280 ANKK1Q8NFD2 765 aa7.87□□□□□ -1.15
RBM39-242ENST00000498280 DDX27Q96GQ7 796 aaKnown RBP7.87□□□□□ -1.15
RBM39-242ENST00000498280 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
RBM39-242ENST00000498280 ITGBL1O95965 494 aaPredicted RBP7.85□□□□□ -1.15
RBM39-242ENST00000498280 MAP3K9P80192 1104 aa7.85□□□□□ -1.15
RBM39-242ENST00000498280 CADPS2Q86UW7 1296 aa7.85□□□□□ -1.15
RBM39-242ENST00000498280 RABGEF1Q9UJ41 708 aa7.85□□□□□ -1.15
RBM39-242ENST00000498280 BCAMP50895 628 aa7.83□□□□□ -1.16
RBM39-242ENST00000498280 LARP6Q9BRS8 491 aaKnown RBP7.83□□□□□ -1.16
RBM39-242ENST00000498280 LCE2BO14633 110 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms