RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 DNAJC5Q9H3Z4 198 aa7.89□□□□□ -1.15
CALD1-224ENST00000498254 PLA2G2EQ9NZK7 142 aa7.89□□□□□ -1.15
CALD1-224ENST00000498254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.88□□□□□ -1.15
CALD1-224ENST00000498254 ZFP91Q96JP5 570 aaPredicted RBP7.88□□□□□ -1.15
CALD1-224ENST00000498254 BCL11BQ9C0K0 894 aaPredicted RBP7.88□□□□□ -1.15
CALD1-224ENST00000498254 ZNF467Q7Z7K2 595 aaPredicted RBP7.85□□□□□ -1.15
CALD1-224ENST00000498254 PDCD7Q8N8D1 485 aaKnown RBP7.85□□□□□ -1.15
CALD1-224ENST00000498254 GOLGA2Q08379 1002 aa7.84□□□□□ -1.15
CALD1-224ENST00000498254 MKRN3Q13064 507 aaKnown RBP7.84□□□□□ -1.15
CALD1-224ENST00000498254 L3MBTL3Q96JM7 780 aaPredicted RBP7.84□□□□□ -1.15
CALD1-224ENST00000498254 IRX2Q9BZI1 471 aaPredicted RBP7.84□□□□□ -1.15
CALD1-224ENST00000498254 CHRM1P11229 460 aaPredicted RBP7.83□□□□□ -1.16
CALD1-224ENST00000498254 PTGER2P43116 358 aa7.83□□□□□ -1.16
CALD1-224ENST00000498254 C3orf67Q6ZVT6 689 aa7.83□□□□□ -1.16
CALD1-224ENST00000498254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.8□□□□□ -1.16
CALD1-224ENST00000498254 PSEN1P49768 467 aa7.79□□□□□ -1.16
CALD1-224ENST00000498254 ILDR1Q86SU0 546 aaPredicted RBP7.75□□□□□ -1.17
CALD1-224ENST00000498254 RYDENQ9NUL5 291 aaKnown RBP7.75□□□□□ -1.17
CALD1-224ENST00000498254 PDAP1Q13442 181 aaKnown RBP7.74□□□□□ -1.17
CALD1-224ENST00000498254 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.18
CALD1-224ENST00000498254 CADPS2Q86UW7 1296 aa7.71□□□□□ -1.18
CALD1-224ENST00000498254 G3V3G9 751 aa7.69□□□□□ -1.18
CALD1-224ENST00000498254 CABP2Q9NPB3 220 aa7.69□□□□□ -1.18
CALD1-224ENST00000498254 BOLA1Q9Y3E2 137 aa7.69□□□□□ -1.18
CALD1-224ENST00000498254 WDR70Q9NW82 654 aa7.68□□□□□ -1.18
CALD1-224ENST00000498254 HOXB3P14651 431 aaPredicted RBP7.66□□□□□ -1.18
CALD1-224ENST00000498254 P3H3Q8IVL6 736 aa7.66□□□□□ -1.18
CALD1-224ENST00000498254 KCNV2Q8TDN2 545 aa7.66□□□□□ -1.18
CALD1-224ENST00000498254 MFRPQ9BY79 579 aa7.65□□□□□ -1.18
CALD1-224ENST00000498254 RGS20O76081 388 aa7.64□□□□□ -1.19
CALD1-224ENST00000498254 ERBB3P21860 1342 aa7.63□□□□□ -1.19
CALD1-224ENST00000498254 HOXB1P14653 301 aaPredicted RBP7.63□□□□□ -1.19
CALD1-224ENST00000498254 ZNF710Q8N1W2 664 aa7.63□□□□□ -1.19
CALD1-224ENST00000498254 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
CALD1-224ENST00000498254 PPP1R37O75864 691 aa7.61□□□□□ -1.19
CALD1-224ENST00000498254 DOK7Q18PE1 504 aa7.61□□□□□ -1.19
CALD1-224ENST00000498254 KRTAP4-6Q9BYQ5 205 aa7.61□□□□□ -1.19
CALD1-224ENST00000498254 EFCAB3Q8N7B9 438 aa7.6□□□□□ -1.19
CALD1-224ENST00000498254 Q6ZNB5 142 aa7.59□□□□□ -1.19
CALD1-224ENST00000498254 LMOD2Q6P5Q4 547 aa7.58□□□□□ -1.2
CALD1-224ENST00000498254 HCSTQ9UBK5 93 aa7.58□□□□□ -1.2
CALD1-224ENST00000498254 PHF8Q9UPP1 1060 aa7.58□□□□□ -1.2
CALD1-224ENST00000498254 RIMBP2O15034 1052 aa7.57□□□□□ -1.2
CALD1-224ENST00000498254 NLRP6P59044 892 aa7.55□□□□□ -1.2
CALD1-224ENST00000498254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.55□□□□□ -1.2
CALD1-224ENST00000498254 TULP1O00294 542 aaPredicted RBP7.54□□□□□ -1.2
CALD1-224ENST00000498254 FBXO22Q8NEZ5 403 aa7.54□□□□□ -1.2
CALD1-224ENST00000498254 VARS2Q5ST30 1063 aaKnown RBP7.53□□□□□ -1.2
CALD1-224ENST00000498254 MICALL2Q8IY33 904 aa7.53□□□□□ -1.2
CALD1-224ENST00000498254 ZSWIM6Q9HCJ5 1215 aa7.53□□□□□ -1.2
CALD1-224ENST00000498254 TIMELESSQ9UNS1 1208 aa7.53□□□□□ -1.2
CALD1-224ENST00000498254 GTF3C3Q9Y5Q9 886 aa7.52□□□□□ -1.21
CALD1-224ENST00000498254 E2F4Q16254 413 aa7.51□□□□□ -1.21
CALD1-224ENST00000498254 TMEM92Q6UXU6 159 aa7.51□□□□□ -1.21
CALD1-224ENST00000498254 SOX12O15370 315 aa7.5□□□□□ -1.21
CALD1-224ENST00000498254 SEMA3EO15041 775 aa7.49□□□□□ -1.21
CALD1-224ENST00000498254 GPR153Q6NV75 609 aa7.49□□□□□ -1.21
CALD1-224ENST00000498254 ZNF687Q8N1G0 1237 aa7.49□□□□□ -1.21
CALD1-224ENST00000498254 ARHGEF1Q92888 912 aaKnown RBP7.49□□□□□ -1.21
CALD1-224ENST00000498254 ANKRD13DQ6ZTN6 518 aa7.48□□□□□ -1.21
CALD1-224ENST00000498254 LARP6Q9BRS8 491 aaKnown RBP7.48□□□□□ -1.21
CALD1-224ENST00000498254 NCKAP5LQ9HCH0 1330 aa7.48□□□□□ -1.21
CALD1-224ENST00000498254 MS4A4AQ96JQ5 239 aa7.47□□□□□ -1.21
CALD1-224ENST00000498254 TMEM132AQ24JP5 1023 aa7.45□□□□□ -1.22
CALD1-224ENST00000498254 ZC3H15Q8WU90 426 aaKnown RBP7.45□□□□□ -1.22
CALD1-224ENST00000498254 TESPA1A2RU30 521 aaPredicted RBP7.43□□□□□ -1.22
CALD1-224ENST00000498254 ARSIQ5FYB1 569 aa7.43□□□□□ -1.22
CALD1-224ENST00000498254 PDE4AP27815 886 aa7.42□□□□□ -1.22
CALD1-224ENST00000498254 BRPF1P55201 1214 aaPredicted RBP7.42□□□□□ -1.22
CALD1-224ENST00000498254 DDX27Q96GQ7 796 aaKnown RBP7.42□□□□□ -1.22
CALD1-224ENST00000498254 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
CALD1-224ENST00000498254 NEUROD2Q15784 382 aa7.4□□□□□ -1.22
CALD1-224ENST00000498254 ZNF316A6NFI3 1004 aaPredicted RBP7.39□□□□□ -1.23
CALD1-224ENST00000498254 MFSD10Q14728 455 aa7.39□□□□□ -1.23
CALD1-224ENST00000498254 CRISPLD2Q9H0B8 497 aa7.39□□□□□ -1.23
CALD1-224ENST00000498254 KHSRPQ92945 711 aaKnown RBP eCLIP7.38□□□□□ -1.23
CALD1-224ENST00000498254 LSM11P83369 360 aaKnown RBP eCLIP7.36□□□□□ -1.23
CALD1-224ENST00000498254 C14orf37Q86TY3 774 aa7.36□□□□□ -1.23
CALD1-224ENST00000498254 SMYD5Q6GMV2 418 aa7.35□□□□□ -1.23
CALD1-224ENST00000498254 MLLT3P42568 568 aaPredicted RBP7.34□□□□□ -1.23
CALD1-224ENST00000498254 PPP1R15BQ5SWA1 713 aa7.33□□□□□ -1.24
CALD1-224ENST00000498254 RBM26Q5T8P6 1007 aaKnown RBP7.33□□□□□ -1.24
CALD1-224ENST00000498254 KIF3CO14782 793 aa7.32□□□□□ -1.24
CALD1-224ENST00000498254 ZMYND10O75800 440 aa7.32□□□□□ -1.24
CALD1-224ENST00000498254 PBX2P40425 430 aa7.32□□□□□ -1.24
CALD1-224ENST00000498254 CAMK2BQ13554 666 aa7.32□□□□□ -1.24
CALD1-224ENST00000498254 C2orf72A6NCS6 295 aa7.31□□□□□ -1.24
CALD1-224ENST00000498254 DPYSL4O14531 572 aa7.3□□□□□ -1.24
CALD1-224ENST00000498254 NUDT7P0C024 238 aa7.3□□□□□ -1.24
CALD1-224ENST00000498254 GPIHBP1Q8IV16 184 aa7.3□□□□□ -1.24
CALD1-224ENST00000498254 SLC34A2O95436 690 aa7.29□□□□□ -1.24
CALD1-224ENST00000498254 ARIH1Q9Y4X5 557 aaPredicted RBP7.29□□□□□ -1.24
CALD1-224ENST00000498254 BARGINQ6ZT62 677 aa7.28□□□□□ -1.24
CALD1-224ENST00000498254 ERICH6Q7L0X2 663 aa7.28□□□□□ -1.24
CALD1-224ENST00000498254 KRI1Q8N9T8 703 aaKnown RBP7.28□□□□□ -1.24
CALD1-224ENST00000498254 GPHNQ9NQX3 736 aaPredicted RBP7.28□□□□□ -1.24
CALD1-224ENST00000498254 LHX6Q9UPM6 363 aa7.28□□□□□ -1.24
CALD1-224ENST00000498254 DSG2Q14126 1118 aa7.27□□□□□ -1.25
CALD1-224ENST00000498254 TRAF7Q6Q0C0 670 aa7.27□□□□□ -1.25
CALD1-224ENST00000498254 POTEEQ6S8J3 1075 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms