RNA–Protein interactions for RNA: ENST00000498054.1

POLR1B-215, Transcript of RNA polymerase I subunit B, humanhuman

TSL 3

Gene POLR1B, Length 636 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-215ENST00000498054 ST18O60284 1047 aa9.9□□□□□ -0.82
POLR1B-215ENST00000498054 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
POLR1B-215ENST00000498054 G3V3G9 751 aa9.85□□□□□ -0.83
POLR1B-215ENST00000498054 SNPHO15079 494 aa9.84□□□□□ -0.83
POLR1B-215ENST00000498054 SOX12O15370 315 aa9.79□□□□□ -0.84
POLR1B-215ENST00000498054 PHF8Q9UPP1 1060 aa9.79□□□□□ -0.84
POLR1B-215ENST00000498054 NBR1Q14596 966 aa9.78□□□□□ -0.84
POLR1B-215ENST00000498054 CDAN1Q8IWY9 1227 aa9.78□□□□□ -0.84
POLR1B-215ENST00000498054 MS4A4AQ96JQ5 239 aa9.78□□□□□ -0.84
POLR1B-215ENST00000498054 TMEM121BQ9BXQ6 578 aaPredicted RBP9.78□□□□□ -0.84
POLR1B-215ENST00000498054 MFRPQ9BY79 579 aa9.78□□□□□ -0.84
POLR1B-215ENST00000498054 MARVELD3Q96A59 401 aa9.77□□□□□ -0.85
POLR1B-215ENST00000498054 NLRP6P59044 892 aa9.75□□□□□ -0.85
POLR1B-215ENST00000498054 MICALL2Q8IY33 904 aa9.75□□□□□ -0.85
POLR1B-215ENST00000498054 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
POLR1B-215ENST00000498054 PRKCSHP14314 528 aaPredicted RBP9.72□□□□□ -0.85
POLR1B-215ENST00000498054 TMEM92Q6UXU6 159 aa9.7□□□□□ -0.86
POLR1B-215ENST00000498054 CADPS2Q86UW7 1296 aa9.7□□□□□ -0.86
POLR1B-215ENST00000498054 FBXO22Q8NEZ5 403 aa9.7□□□□□ -0.86
POLR1B-215ENST00000498054 PPP1R37O75864 691 aa9.69□□□□□ -0.86
POLR1B-215ENST00000498054 HOXB3P14651 431 aaPredicted RBP9.69□□□□□ -0.86
POLR1B-215ENST00000498054 EMP3P54852 163 aa9.69□□□□□ -0.86
POLR1B-215ENST00000498054 TPRNQ4KMQ1 711 aa9.67□□□□□ -0.86
POLR1B-215ENST00000498054 ZNF710Q8N1W2 664 aa9.64□□□□□ -0.87
POLR1B-215ENST00000498054 POTEB3A0JP26 581 aa9.63□□□□□ -0.87
POLR1B-215ENST00000498054 FAM205CA6NFA0 338 aa9.63□□□□□ -0.87
POLR1B-215ENST00000498054 DOK7Q18PE1 504 aa9.63□□□□□ -0.87
POLR1B-215ENST00000498054 POTEBQ6S5H4 581 aa9.63□□□□□ -0.87
POLR1B-215ENST00000498054 P3H3Q8IVL6 736 aa9.62□□□□□ -0.87
POLR1B-215ENST00000498054 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
POLR1B-215ENST00000498054 HOXB1P14653 301 aaPredicted RBP9.6□□□□□ -0.87
POLR1B-215ENST00000498054 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
POLR1B-215ENST00000498054 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
POLR1B-215ENST00000498054 LARP6Q9BRS8 491 aaKnown RBP9.55□□□□□ -0.88
POLR1B-215ENST00000498054 PDE4AP27815 886 aa9.54□□□□□ -0.88
POLR1B-215ENST00000498054 SPNS2Q8IVW8 549 aa9.54□□□□□ -0.88
POLR1B-215ENST00000498054 KRTAP3-3Q9BYR6 98 aa9.54□□□□□ -0.88
POLR1B-215ENST00000498054 KRTAP3-2Q9BYR7 98 aa9.54□□□□□ -0.88
POLR1B-215ENST00000498054 ERBB3P21860 1342 aa9.54□□□□□ -0.88
POLR1B-215ENST00000498054 GPR153Q6NV75 609 aa9.53□□□□□ -0.88
POLR1B-215ENST00000498054 C2orf72A6NCS6 295 aa9.52□□□□□ -0.89
POLR1B-215ENST00000498054 ZSWIM6Q9HCJ5 1215 aa9.52□□□□□ -0.89
POLR1B-215ENST00000498054 KIF3CO14782 793 aa9.51□□□□□ -0.89
POLR1B-215ENST00000498054 E2F4Q16254 413 aa9.51□□□□□ -0.89
POLR1B-215ENST00000498054 MMRN1Q13201 1228 aa9.5□□□□□ -0.89
POLR1B-215ENST00000498054 NCKAP5LQ9HCH0 1330 aa9.5□□□□□ -0.89
POLR1B-215ENST00000498054 ARSIQ5FYB1 569 aa9.49□□□□□ -0.89
POLR1B-215ENST00000498054 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
POLR1B-215ENST00000498054 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.89
POLR1B-215ENST00000498054 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
POLR1B-215ENST00000498054 TMC2Q8TDI7 906 aa9.46□□□□□ -0.9
POLR1B-215ENST00000498054 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
POLR1B-215ENST00000498054 CRISPLD2Q9H0B8 497 aa9.45□□□□□ -0.9
POLR1B-215ENST00000498054 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
POLR1B-215ENST00000498054 MFSD10Q14728 455 aa9.42□□□□□ -0.9
POLR1B-215ENST00000498054 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
POLR1B-215ENST00000498054 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
POLR1B-215ENST00000498054 SLC34A2O95436 690 aa9.39□□□□□ -0.91
POLR1B-215ENST00000498054 NUDT7P0C024 238 aa9.39□□□□□ -0.91
POLR1B-215ENST00000498054 GPHNQ9NQX3 736 aaPredicted RBP9.39□□□□□ -0.91
POLR1B-215ENST00000498054 SEMA3EO15041 775 aa9.38□□□□□ -0.91
POLR1B-215ENST00000498054 PPP1R15BQ5SWA1 713 aa9.38□□□□□ -0.91
POLR1B-215ENST00000498054 LMOD2Q6P5Q4 547 aa9.38□□□□□ -0.91
POLR1B-215ENST00000498054 PCDHGA4Q9Y5G9 962 aa9.38□□□□□ -0.91
POLR1B-215ENST00000498054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.37□□□□□ -0.91
POLR1B-215ENST00000498054 FOXK1P85037 733 aa9.34□□□□□ -0.91
POLR1B-215ENST00000498054 DSG2Q14126 1118 aa9.34□□□□□ -0.91
POLR1B-215ENST00000498054 LHX6Q9UPM6 363 aa9.34□□□□□ -0.91
POLR1B-215ENST00000498054 CAMK2BQ13554 666 aa9.33□□□□□ -0.92
POLR1B-215ENST00000498054 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
POLR1B-215ENST00000498054 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
POLR1B-215ENST00000498054 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
POLR1B-215ENST00000498054 PTCD2Q8WV60 388 aaKnown RBP9.3□□□□□ -0.92
POLR1B-215ENST00000498054 DPYSL4O14531 572 aa9.28□□□□□ -0.92
POLR1B-215ENST00000498054 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
POLR1B-215ENST00000498054 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
POLR1B-215ENST00000498054 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
POLR1B-215ENST00000498054 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
POLR1B-215ENST00000498054 POTEEQ6S8J3 1075 aa9.26□□□□□ -0.93
POLR1B-215ENST00000498054 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
POLR1B-215ENST00000498054 MYT1LQ9UL68 1186 aa9.26□□□□□ -0.93
POLR1B-215ENST00000498054 AXIN2Q9Y2T1 843 aa9.26□□□□□ -0.93
POLR1B-215ENST00000498054 RNF166Q96A37 237 aaPredicted RBP9.25□□□□□ -0.93
POLR1B-215ENST00000498054 ZC3H15Q8WU90 426 aaKnown RBP9.24□□□□□ -0.93
POLR1B-215ENST00000498054 PBX2P40425 430 aa9.23□□□□□ -0.93
POLR1B-215ENST00000498054 MLLT3P42568 568 aaPredicted RBP9.23□□□□□ -0.93
POLR1B-215ENST00000498054 MAP3K9P80192 1104 aa9.23□□□□□ -0.93
POLR1B-215ENST00000498054 UPF1Q92900 1129 aaKnown RBP eCLIP9.23□□□□□ -0.93
POLR1B-215ENST00000498054 SPDYE16A6NNV3 312 aaPredicted RBP9.22□□□□□ -0.93
POLR1B-215ENST00000498054 TBC1D12O60347 775 aa9.22□□□□□ -0.93
POLR1B-215ENST00000498054 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.94
POLR1B-215ENST00000498054 PTGER2P43116 358 aa9.2□□□□□ -0.94
POLR1B-215ENST00000498054 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
POLR1B-215ENST00000498054 OXER1Q8TDS5 423 aa9.19□□□□□ -0.94
POLR1B-215ENST00000498054 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
POLR1B-215ENST00000498054 PDIA6Q15084 440 aa9.18□□□□□ -0.94
POLR1B-215ENST00000498054 GRXCR2A6NFK2 248 aa9.16□□□□□ -0.94
POLR1B-215ENST00000498054 PPP4R3BQ5MIZ7 849 aa9.16□□□□□ -0.94
POLR1B-215ENST00000498054 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
POLR1B-215ENST00000498054 PSEN2P49810 448 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms