RNA–Protein interactions for RNA: ENST00000497622.1

FAM3C-205, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-205ENST00000497622 EMP3P54852 163 aa11.74□□□□□ -0.53
FAM3C-205ENST00000497622 PPP1R37O75864 691 aa11.67□□□□□ -0.54
FAM3C-205ENST00000497622 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
FAM3C-205ENST00000497622 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
FAM3C-205ENST00000497622 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
FAM3C-205ENST00000497622 ZSWIM6Q9HCJ5 1215 aa11.65□□□□□ -0.54
FAM3C-205ENST00000497622 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
FAM3C-205ENST00000497622 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
FAM3C-205ENST00000497622 C2orf72A6NCS6 295 aa11.63□□□□□ -0.55
FAM3C-205ENST00000497622 DNAJC5Q9H3Z4 198 aa11.63□□□□□ -0.55
FAM3C-205ENST00000497622 HS3ST6Q96QI5 342 aa11.62□□□□□ -0.55
FAM3C-205ENST00000497622 KIF3CO14782 793 aa11.61□□□□□ -0.55
FAM3C-205ENST00000497622 ERBB3P21860 1342 aa11.6□□□□□ -0.55
FAM3C-205ENST00000497622 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
FAM3C-205ENST00000497622 GPR153Q6NV75 609 aa11.57□□□□□ -0.56
FAM3C-205ENST00000497622 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
FAM3C-205ENST00000497622 ARSIQ5FYB1 569 aa11.55□□□□□ -0.56
FAM3C-205ENST00000497622 POTEBQ6S5H4 581 aa11.55□□□□□ -0.56
FAM3C-205ENST00000497622 VARS2Q5ST30 1063 aaKnown RBP11.51□□□□□ -0.57
FAM3C-205ENST00000497622 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
FAM3C-205ENST00000497622 SLC34A2O95436 690 aa11.49□□□□□ -0.57
FAM3C-205ENST00000497622 FOXK1P85037 733 aa11.47□□□□□ -0.57
FAM3C-205ENST00000497622 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
FAM3C-205ENST00000497622 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
FAM3C-205ENST00000497622 AMER1Q5JTC6 1135 aaPredicted RBP11.46□□□□□ -0.57
FAM3C-205ENST00000497622 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
FAM3C-205ENST00000497622 PCDHGA4Q9Y5G9 962 aa11.46□□□□□ -0.57
FAM3C-205ENST00000497622 PLPP6Q8IY26 295 aa11.45□□□□□ -0.58
FAM3C-205ENST00000497622 KRTAP3-3Q9BYR6 98 aa11.45□□□□□ -0.58
FAM3C-205ENST00000497622 KRTAP3-2Q9BYR7 98 aa11.45□□□□□ -0.58
FAM3C-205ENST00000497622 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
FAM3C-205ENST00000497622 NUDT7P0C024 238 aa11.43□□□□□ -0.58
FAM3C-205ENST00000497622 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
FAM3C-205ENST00000497622 DSG2Q14126 1118 aa11.42□□□□□ -0.58
FAM3C-205ENST00000497622 PDE4AP27815 886 aa11.4□□□□□ -0.58
FAM3C-205ENST00000497622 TBC1D12O60347 775 aa11.39□□□□□ -0.59
FAM3C-205ENST00000497622 MMRN1Q13201 1228 aa11.39□□□□□ -0.59
FAM3C-205ENST00000497622 PTCD2Q8WV60 388 aaKnown RBP11.39□□□□□ -0.59
FAM3C-205ENST00000497622 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
FAM3C-205ENST00000497622 LHX6Q9UPM6 363 aa11.36□□□□□ -0.59
FAM3C-205ENST00000497622 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
FAM3C-205ENST00000497622 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
FAM3C-205ENST00000497622 PPP1R15BQ5SWA1 713 aa11.33□□□□□ -0.6
FAM3C-205ENST00000497622 PSDA5PKW4 1024 aaPredicted RBP11.32□□□□□ -0.6
FAM3C-205ENST00000497622 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
FAM3C-205ENST00000497622 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
FAM3C-205ENST00000497622 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
FAM3C-205ENST00000497622 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
FAM3C-205ENST00000497622 PBX2P40425 430 aa11.28□□□□□ -0.6
FAM3C-205ENST00000497622 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
FAM3C-205ENST00000497622 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
FAM3C-205ENST00000497622 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
FAM3C-205ENST00000497622 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
FAM3C-205ENST00000497622 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
FAM3C-205ENST00000497622 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
FAM3C-205ENST00000497622 MFSD10Q14728 455 aa11.22□□□□□ -0.61
FAM3C-205ENST00000497622 PPP4R3BQ5MIZ7 849 aa11.22□□□□□ -0.61
FAM3C-205ENST00000497622 AXIN2Q9Y2T1 843 aa11.22□□□□□ -0.61
FAM3C-205ENST00000497622 PTGER2P43116 358 aa11.21□□□□□ -0.61
FAM3C-205ENST00000497622 CADPS2Q86UW7 1296 aa11.21□□□□□ -0.61
FAM3C-205ENST00000497622 ARHGAP33O14559 1287 aa11.2□□□□□ -0.62
FAM3C-205ENST00000497622 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
FAM3C-205ENST00000497622 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
FAM3C-205ENST00000497622 POTEEQ6S8J3 1075 aa11.18□□□□□ -0.62
FAM3C-205ENST00000497622 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
FAM3C-205ENST00000497622 EVI5O60447 810 aa11.16□□□□□ -0.62
FAM3C-205ENST00000497622 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
FAM3C-205ENST00000497622 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.62
FAM3C-205ENST00000497622 CFAP44Q96MT7 982 aa11.14□□□□□ -0.63
FAM3C-205ENST00000497622 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
FAM3C-205ENST00000497622 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
FAM3C-205ENST00000497622 PSEN2P49810 448 aa11.12□□□□□ -0.63
FAM3C-205ENST00000497622 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
FAM3C-205ENST00000497622 ADGRD1Q6QNK2 874 aa11.1□□□□□ -0.63
FAM3C-205ENST00000497622 TK2O00142 265 aa11.09□□□□□ -0.63
FAM3C-205ENST00000497622 FOSBP53539 338 aa11.09□□□□□ -0.63
FAM3C-205ENST00000497622 KCNK17Q96T54 332 aa11.09□□□□□ -0.63
FAM3C-205ENST00000497622 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
FAM3C-205ENST00000497622 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
FAM3C-205ENST00000497622 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
FAM3C-205ENST00000497622 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
FAM3C-205ENST00000497622 STAC3Q96MF2 364 aa11.06□□□□□ -0.64
FAM3C-205ENST00000497622 PTPREP23469 700 aa11.05□□□□□ -0.64
FAM3C-205ENST00000497622 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
FAM3C-205ENST00000497622 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
FAM3C-205ENST00000497622 DPYSL4O14531 572 aa11.01□□□□□ -0.65
FAM3C-205ENST00000497622 HRO43593 1189 aa11□□□□□ -0.65
FAM3C-205ENST00000497622 ADAM33Q9BZ11 813 aa11□□□□□ -0.65
FAM3C-205ENST00000497622 PCDHGA10Q9Y5H3 936 aa10.99□□□□□ -0.65
FAM3C-205ENST00000497622 PHF14O94880 888 aa10.98□□□□□ -0.65
FAM3C-205ENST00000497622 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
FAM3C-205ENST00000497622 VPS9D1Q9Y2B5 631 aa10.98□□□□□ -0.65
FAM3C-205ENST00000497622 TYW1BQ6NUM6 668 aa10.97□□□□□ -0.65
FAM3C-205ENST00000497622 SLC4A5Q9BY07 1137 aa10.97□□□□□ -0.65
FAM3C-205ENST00000497622 E2F4Q16254 413 aa10.96□□□□□ -0.65
FAM3C-205ENST00000497622 EPAS1Q99814 870 aa10.94□□□□□ -0.66
FAM3C-205ENST00000497622 HCSTQ9UBK5 93 aa10.94□□□□□ -0.66
FAM3C-205ENST00000497622 ZBED2Q9BTP6 218 aa10.93□□□□□ -0.66
FAM3C-205ENST00000497622 SPDYE16A6NNV3 312 aaPredicted RBP10.91□□□□□ -0.66
FAM3C-205ENST00000497622 KCTD12Q96CX2 325 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms