RNA–Protein interactions for RNA: ENST00000497430.1

RFC2-212, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 753 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-212ENST00000497430 SCAPERQ9BY12 1400 aa17.62■□□□□ 0.41
RFC2-212ENST00000497430 ZFYVE16Q7Z3T8 1539 aa17.59■□□□□ 0.41
RFC2-212ENST00000497430 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.41
RFC2-212ENST00000497430 MAGI2Q86UL8 1455 aa17.58■□□□□ 0.41
RFC2-212ENST00000497430 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.41
RFC2-212ENST00000497430 POGZQ7Z3K3 1410 aa17.58■□□□□ 0.41
RFC2-212ENST00000497430 EFCAB2Q5VUJ9 269 aa17.56■□□□□ 0.4
RFC2-212ENST00000497430 CDK11AQ9UQ88 783 aaPredicted RBP17.55■□□□□ 0.4
RFC2-212ENST00000497430 LMTK3Q96Q04 1460 aa17.55■□□□□ 0.4
RFC2-212ENST00000497430 PCF11O94913 1555 aaKnown RBP17.53■□□□□ 0.4
RFC2-212ENST00000497430 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
RFC2-212ENST00000497430 FER1L4A9Z1Z3 1794 aa17.52■□□□□ 0.4
RFC2-212ENST00000497430 ATP10AO60312 1499 aa17.51■□□□□ 0.39
RFC2-212ENST00000497430 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
RFC2-212ENST00000497430 KDM5CP41229 1560 aa17.5■□□□□ 0.39
RFC2-212ENST00000497430 MLECQ14165 292 aa17.5■□□□□ 0.39
RFC2-212ENST00000497430 ARHGAP5Q13017 1502 aa17.5■□□□□ 0.39
RFC2-212ENST00000497430 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
RFC2-212ENST00000497430 ARHGEF12Q9NZN5 1544 aa17.49■□□□□ 0.39
RFC2-212ENST00000497430 CLIP1P30622 1438 aa17.47■□□□□ 0.39
RFC2-212ENST00000497430 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
RFC2-212ENST00000497430 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
RFC2-212ENST00000497430 ZNF518AQ6AHZ1 1483 aa17.46■□□□□ 0.39
RFC2-212ENST00000497430 HSPA2P54652 639 aa17.46■□□□□ 0.39
RFC2-212ENST00000497430 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
RFC2-212ENST00000497430 SETD1BQ9UPS6 1966 aaKnown RBP17.46■□□□□ 0.39
RFC2-212ENST00000497430 CCDC18Q5T9S5 1454 aa17.45■□□□□ 0.38
RFC2-212ENST00000497430 TRAPPC8Q9Y2L5 1435 aa17.45■□□□□ 0.38
RFC2-212ENST00000497430 DIP2CQ9Y2E4 1556 aa17.45■□□□□ 0.38
RFC2-212ENST00000497430 ITSN2Q9NZM3 1697 aa17.44■□□□□ 0.38
RFC2-212ENST00000497430 ABCA6Q8N139 1617 aa17.43■□□□□ 0.38
RFC2-212ENST00000497430 ABCC1P33527 1531 aa17.42■□□□□ 0.38
RFC2-212ENST00000497430 KIDINS220Q9ULH0 1771 aa17.42■□□□□ 0.38
RFC2-212ENST00000497430 FYCO1Q9BQS8 1478 aa17.42■□□□□ 0.38
RFC2-212ENST00000497430 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
RFC2-212ENST00000497430 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
RFC2-212ENST00000497430 REREQ9P2R6 1566 aa17.4■□□□□ 0.38
RFC2-212ENST00000497430 FBXO41Q8TF61 875 aa17.38■□□□□ 0.37
RFC2-212ENST00000497430 GPATCH8Q9UKJ3 1502 aaKnown RBP17.37■□□□□ 0.37
RFC2-212ENST00000497430 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
RFC2-212ENST00000497430 PREX1Q8TCU6 1659 aa17.36■□□□□ 0.37
RFC2-212ENST00000497430 AGLP35573 1532 aa17.35■□□□□ 0.37
RFC2-212ENST00000497430 C3P01024 1663 aa17.35■□□□□ 0.37
RFC2-212ENST00000497430 STRCQ7RTU9 1775 aa17.35■□□□□ 0.37
RFC2-212ENST00000497430 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.36
RFC2-212ENST00000497430 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
RFC2-212ENST00000497430 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
RFC2-212ENST00000497430 SYCP2Q9BX26 1530 aa17.31■□□□□ 0.36
RFC2-212ENST00000497430 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.36
RFC2-212ENST00000497430 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
RFC2-212ENST00000497430 CFDP1Q9UEE9 299 aaPredicted RBP17.25■□□□□ 0.35
RFC2-212ENST00000497430 SPAG9O60271 1321 aaKnown RBP17.24■□□□□ 0.35
RFC2-212ENST00000497430 ZNF644Q9H582 1327 aaPredicted RBP17.24■□□□□ 0.35
RFC2-212ENST00000497430 TIAM1Q13009 1591 aa17.24■□□□□ 0.35
RFC2-212ENST00000497430 INO80Q9ULG1 1556 aaPredicted RBP17.24■□□□□ 0.35
RFC2-212ENST00000497430 ATP7AQ04656 1500 aa17.23■□□□□ 0.35
RFC2-212ENST00000497430 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
RFC2-212ENST00000497430 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
RFC2-212ENST00000497430 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
RFC2-212ENST00000497430 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
RFC2-212ENST00000497430 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
RFC2-212ENST00000497430 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
RFC2-212ENST00000497430 MROH2AA6NES4 1674 aa17.21■□□□□ 0.35
RFC2-212ENST00000497430 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
RFC2-212ENST00000497430 PLEKHH2Q8IVE3 1493 aa17.2■□□□□ 0.34
RFC2-212ENST00000497430 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
RFC2-212ENST00000497430 CLTCQ00610 1675 aaKnown RBP17.19■□□□□ 0.34
RFC2-212ENST00000497430 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
RFC2-212ENST00000497430 EHBP1L1Q8N3D4 1523 aa17.18■□□□□ 0.34
RFC2-212ENST00000497430 A2MP01023 1474 aa17.18■□□□□ 0.34
RFC2-212ENST00000497430 ADGBQ8N7X0 1667 aa17.16■□□□□ 0.34
RFC2-212ENST00000497430 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
RFC2-212ENST00000497430 LOC105371045A0A1W2PR82 267 aa17.15■□□□□ 0.34
RFC2-212ENST00000497430 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
RFC2-212ENST00000497430 PTPRTO14522 1441 aa17.13■□□□□ 0.33
RFC2-212ENST00000497430 NPATQ14207 1427 aa17.13■□□□□ 0.33
RFC2-212ENST00000497430 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
RFC2-212ENST00000497430 NCOA1Q15788 1441 aa17.12■□□□□ 0.33
RFC2-212ENST00000497430 GGT6Q6P531 493 aa17.11■□□□□ 0.33
RFC2-212ENST00000497430 RTEL1-TNFRSF6BF6WH68 1400 aa17.11■□□□□ 0.33
RFC2-212ENST00000497430 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
RFC2-212ENST00000497430 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
RFC2-212ENST00000497430 LTBP4Q8N2S1 1624 aa17.1■□□□□ 0.33
RFC2-212ENST00000497430 ZNF142P52746 1687 aaPredicted RBP17.08■□□□□ 0.32
RFC2-212ENST00000497430 DHX29Q7Z478 1369 aaKnown RBP17.08■□□□□ 0.32
RFC2-212ENST00000497430 MYO3AQ8NEV4 1616 aa17.07■□□□□ 0.32
RFC2-212ENST00000497430 CAMSAP2Q08AD1 1489 aa17.07■□□□□ 0.32
RFC2-212ENST00000497430 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
RFC2-212ENST00000497430 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
RFC2-212ENST00000497430 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
RFC2-212ENST00000497430 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
RFC2-212ENST00000497430 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
RFC2-212ENST00000497430 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
RFC2-212ENST00000497430 ARHGEF5Q12774 1597 aa17.03■□□□□ 0.32
RFC2-212ENST00000497430 CEP170BQ9Y4F5 1589 aaPredicted RBP17.03■□□□□ 0.32
RFC2-212ENST00000497430 KIF3BO15066 747 aa17.02■□□□□ 0.32
RFC2-212ENST00000497430 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
RFC2-212ENST00000497430 FBXO31Q5XUX0 539 aaPredicted RBP17.01■□□□□ 0.31
RFC2-212ENST00000497430 TCOF1Q13428 1488 aaKnown RBP17■□□□□ 0.31
RFC2-212ENST00000497430 DNMT1P26358 1616 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms