RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 PREX2Q70Z35 1606 aa26.02■■□□□ 1.76
HCLS1-212ENST00000497391 CCNB3Q8WWL7 1395 aa26.01■■□□□ 1.75
HCLS1-212ENST00000497391 TIAM1Q13009 1591 aa26■■□□□ 1.75
HCLS1-212ENST00000497391 SCAPERQ9BY12 1400 aa26■■□□□ 1.75
HCLS1-212ENST00000497391 FRMPD1Q5SYB0 1578 aa25.96■■□□□ 1.75
HCLS1-212ENST00000497391 POGZQ7Z3K3 1410 aa25.96■■□□□ 1.75
HCLS1-212ENST00000497391 RICTORQ6R327 1708 aa25.95■■□□□ 1.74
HCLS1-212ENST00000497391 CDC42BPBQ9Y5S2 1711 aa25.94■■□□□ 1.74
HCLS1-212ENST00000497391 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
HCLS1-212ENST00000497391 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
HCLS1-212ENST00000497391 ZNF518AQ6AHZ1 1483 aa25.93■■□□□ 1.74
HCLS1-212ENST00000497391 CFDP1Q9UEE9 299 aaPredicted RBP25.93■■□□□ 1.74
HCLS1-212ENST00000497391 SUPT6HQ7KZ85 1726 aaKnown RBP25.93■■□□□ 1.74
HCLS1-212ENST00000497391 ZMYM4Q5VZL5 1548 aa25.92■■□□□ 1.74
HCLS1-212ENST00000497391 GPATCH8Q9UKJ3 1502 aaKnown RBP25.92■■□□□ 1.74
HCLS1-212ENST00000497391 MAGI2Q86UL8 1455 aa25.91■■□□□ 1.74
HCLS1-212ENST00000497391 ZNF777Q9ULD5 760 aaPredicted RBP25.91■■□□□ 1.74
HCLS1-212ENST00000497391 ITSN2Q9NZM3 1697 aa25.9■■□□□ 1.74
HCLS1-212ENST00000497391 MYT1LQ9UL68 1186 aa25.89■■□□□ 1.74
HCLS1-212ENST00000497391 LRRC9Q6ZRR7 1453 aa25.89■■□□□ 1.73
HCLS1-212ENST00000497391 ARHGEF40Q8TER5 1519 aa25.88■■□□□ 1.73
HCLS1-212ENST00000497391 PLEKHH2Q8IVE3 1493 aa25.88■■□□□ 1.73
HCLS1-212ENST00000497391 ABCC1P33527 1531 aa25.88■■□□□ 1.73
HCLS1-212ENST00000497391 ZFYVE16Q7Z3T8 1539 aa25.88■■□□□ 1.73
HCLS1-212ENST00000497391 NCOA2Q15596 1464 aa25.85■■□□□ 1.73
HCLS1-212ENST00000497391 ARID4BQ4LE39 1312 aaPredicted RBP25.85■■□□□ 1.73
HCLS1-212ENST00000497391 KDM5CP41229 1560 aa25.8■■□□□ 1.72
HCLS1-212ENST00000497391 SAMD9LQ8IVG5 1584 aa25.8■■□□□ 1.72
HCLS1-212ENST00000497391 HECW2Q9P2P5 1572 aa25.79■■□□□ 1.72
HCLS1-212ENST00000497391 KDM4FA0A1W2PPD8 638 aa25.79■■□□□ 1.72
HCLS1-212ENST00000497391 AFAP1Q8N556 730 aa25.79■■□□□ 1.72
HCLS1-212ENST00000497391 KIAA1107Q9UPP5 1409 aa25.79■■□□□ 1.72
HCLS1-212ENST00000497391 SYCP2Q9BX26 1530 aa25.78■■□□□ 1.72
HCLS1-212ENST00000497391 YEATS2Q9ULM3 1422 aa25.76■■□□□ 1.71
HCLS1-212ENST00000497391 TRAPPC8Q9Y2L5 1435 aa25.75■■□□□ 1.71
HCLS1-212ENST00000497391 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
HCLS1-212ENST00000497391 ARHGEF12Q9NZN5 1544 aa25.73■■□□□ 1.71
HCLS1-212ENST00000497391 ATP10AO60312 1499 aa25.73■■□□□ 1.71
HCLS1-212ENST00000497391 MLH3Q9UHC1 1453 aa25.73■■□□□ 1.71
HCLS1-212ENST00000497391 C9orf84Q5VXU9 1444 aa25.72■■□□□ 1.71
HCLS1-212ENST00000497391 HNRNPMP52272 730 aaKnown RBP eCLIP25.72■■□□□ 1.71
HCLS1-212ENST00000497391 SPAG9O60271 1321 aaKnown RBP25.71■■□□□ 1.71
HCLS1-212ENST00000497391 CAMSAP2Q08AD1 1489 aa25.68■■□□□ 1.7
HCLS1-212ENST00000497391 MYOM3Q5VTT5 1437 aa25.67■■□□□ 1.7
HCLS1-212ENST00000497391 RSPH4AQ5TD94 716 aa25.66■■□□□ 1.7
HCLS1-212ENST00000497391 ZNF644Q9H582 1327 aaPredicted RBP25.65■■□□□ 1.7
HCLS1-212ENST00000497391 MIA2Q96PC5 1412 aa25.65■■□□□ 1.7
HCLS1-212ENST00000497391 DIP2CQ9Y2E4 1556 aa25.65■■□□□ 1.7
HCLS1-212ENST00000497391 BCORL1Q5H9F3 1711 aa25.64■■□□□ 1.7
HCLS1-212ENST00000497391 CCDC141Q6ZP82 1450 aa25.62■■□□□ 1.69
HCLS1-212ENST00000497391 ABCA6Q8N139 1617 aa25.62■■□□□ 1.69
HCLS1-212ENST00000497391 ATP7AQ04656 1500 aa25.62■■□□□ 1.69
HCLS1-212ENST00000497391 REREQ9P2R6 1566 aa25.61■■□□□ 1.69
HCLS1-212ENST00000497391 KIDINS220Q9ULH0 1771 aa25.59■■□□□ 1.69
HCLS1-212ENST00000497391 MBD5Q9P267 1494 aa25.59■■□□□ 1.69
HCLS1-212ENST00000497391 ADAMTSL3P82987 1691 aa25.58■■□□□ 1.69
HCLS1-212ENST00000497391 INO80Q9ULG1 1556 aaPredicted RBP25.58■■□□□ 1.69
HCLS1-212ENST00000497391 MLECQ14165 292 aa25.58■■□□□ 1.69
HCLS1-212ENST00000497391 TSPY4P0CV99 314 aa25.57■■□□□ 1.68
HCLS1-212ENST00000497391 TSPY10P0CW01 314 aa25.57■■□□□ 1.68
HCLS1-212ENST00000497391 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
HCLS1-212ENST00000497391 RTEL1-TNFRSF6BF6WH68 1400 aa25.55■■□□□ 1.68
HCLS1-212ENST00000497391 MADDQ8WXG6 1647 aa25.54■■□□□ 1.68
HCLS1-212ENST00000497391 ESF1Q9H501 851 aaKnown RBP25.53■■□□□ 1.68
HCLS1-212ENST00000497391 AGLP35573 1532 aa25.53■■□□□ 1.68
HCLS1-212ENST00000497391 FGD6Q6ZV73 1430 aa25.51■■□□□ 1.67
HCLS1-212ENST00000497391 PTPRMP28827 1452 aa25.51■■□□□ 1.67
HCLS1-212ENST00000497391 A2MP01023 1474 aa25.5■■□□□ 1.67
HCLS1-212ENST00000497391 SIGLEC1Q9BZZ2 1709 aa25.5■■□□□ 1.67
HCLS1-212ENST00000497391 ADGBQ8N7X0 1667 aa25.49■■□□□ 1.67
HCLS1-212ENST00000497391 PTPN23Q9H3S7 1636 aa25.49■■□□□ 1.67
HCLS1-212ENST00000497391 RIMS1Q86UR5 1692 aaKnown RBP25.48■■□□□ 1.67
HCLS1-212ENST00000497391 FER1L4A9Z1Z3 1794 aa25.48■■□□□ 1.67
HCLS1-212ENST00000497391 PLXNC1O60486 1568 aa25.43■■□□□ 1.66
HCLS1-212ENST00000497391 TCOF1Q13428 1488 aaKnown RBP25.41■■□□□ 1.66
HCLS1-212ENST00000497391 MAST1Q9Y2H9 1570 aa25.41■■□□□ 1.66
HCLS1-212ENST00000497391 CNTLNQ9NXG0 1405 aa25.39■■□□□ 1.66
HCLS1-212ENST00000497391 FAM50AQ14320 339 aaKnown RBP25.39■■□□□ 1.66
HCLS1-212ENST00000497391 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.66
HCLS1-212ENST00000497391 DHX29Q7Z478 1369 aaKnown RBP25.39■■□□□ 1.65
HCLS1-212ENST00000497391 SHANK2Q9UPX8 1470 aa25.39■■□□□ 1.65
HCLS1-212ENST00000497391 DNMT1P26358 1616 aaKnown RBP25.35■■□□□ 1.65
HCLS1-212ENST00000497391 DAPK1P53355 1430 aa25.35■■□□□ 1.65
HCLS1-212ENST00000497391 GGT6Q6P531 493 aa25.34■■□□□ 1.65
HCLS1-212ENST00000497391 CROCC2H7BZ55 1655 aa25.33■■□□□ 1.65
HCLS1-212ENST00000497391 ABCC5O15440 1437 aa25.32■■□□□ 1.64
HCLS1-212ENST00000497391 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
HCLS1-212ENST00000497391 KIF3BO15066 747 aa25.31■■□□□ 1.64
HCLS1-212ENST00000497391 PPARGC1BQ86YN6 1023 aaKnown RBP25.31■■□□□ 1.64
HCLS1-212ENST00000497391 ANKRD30AQ9BXX3 1397 aa25.29■■□□□ 1.64
HCLS1-212ENST00000497391 KIF15Q9NS87 1388 aa25.29■■□□□ 1.64
HCLS1-212ENST00000497391 DUOX2Q9NRD8 1548 aa25.28■■□□□ 1.64
HCLS1-212ENST00000497391 FAM135AQ9P2D6 1515 aa25.25■■□□□ 1.63
HCLS1-212ENST00000497391 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
HCLS1-212ENST00000497391 EIF2AK4Q9P2K8 1649 aaKnown RBP25.24■■□□□ 1.63
HCLS1-212ENST00000497391 RRP7BPQ9NSQ0 103 aa25.23■■□□□ 1.63
HCLS1-212ENST00000497391 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
HCLS1-212ENST00000497391 CEBPAP49715 358 aaPredicted RBP25.22■■□□□ 1.63
HCLS1-212ENST00000497391 ERBINQ96RT1 1412 aa25.21■■□□□ 1.63
HCLS1-212ENST00000497391 CLTCQ00610 1675 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms