RNA–Protein interactions for RNA: ENST00000497244.1

CASS4-203, Transcript of Cas scaffold protein family member 4, humanhuman

TSL 1 (best)

Gene CASS4, Length 2,871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4-203ENST00000497244 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
CASS4-203ENST00000497244 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
CASS4-203ENST00000497244 UGGT2Q9NYU1 1516 aa12.17□□□□□ -0.46
CASS4-203ENST00000497244 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
CASS4-203ENST00000497244 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
CASS4-203ENST00000497244 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
CASS4-203ENST00000497244 KIAA0556O60303 1618 aa12.15□□□□□ -0.46
CASS4-203ENST00000497244 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
CASS4-203ENST00000497244 EFCAB5A4FU69 1503 aa12.15□□□□□ -0.46
CASS4-203ENST00000497244 ZNF326Q5BKZ1 582 aaKnown RBP12.14□□□□□ -0.47
CASS4-203ENST00000497244 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
CASS4-203ENST00000497244 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
CASS4-203ENST00000497244 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
CASS4-203ENST00000497244 ZNF592Q92610 1267 aa12.12□□□□□ -0.47
CASS4-203ENST00000497244 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
CASS4-203ENST00000497244 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
CASS4-203ENST00000497244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
CASS4-203ENST00000497244 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
CASS4-203ENST00000497244 AAMPQ13685 434 aa12.1□□□□□ -0.47
CASS4-203ENST00000497244 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
CASS4-203ENST00000497244 KANK4Q5T7N3 995 aaPredicted RBP12.1□□□□□ -0.47
CASS4-203ENST00000497244 MAP3K1Q13233 1512 aa12.09□□□□□ -0.47
CASS4-203ENST00000497244 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.09□□□□□ -0.47
CASS4-203ENST00000497244 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
CASS4-203ENST00000497244 NAP1L5Q96NT1 182 aaPredicted RBP12.09□□□□□ -0.47
CASS4-203ENST00000497244 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.47
CASS4-203ENST00000497244 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.47
CASS4-203ENST00000497244 RAD21O60216 631 aa12.08□□□□□ -0.48
CASS4-203ENST00000497244 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
CASS4-203ENST00000497244 TICAM2Q86XR7 235 aa12.08□□□□□ -0.48
CASS4-203ENST00000497244 KCTD17Q8N5Z5 321 aa12.07□□□□□ -0.48
CASS4-203ENST00000497244 CFAP43Q8NDM7 1665 aa12.07□□□□□ -0.48
CASS4-203ENST00000497244 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
CASS4-203ENST00000497244 PKD2Q13563 968 aa12.06□□□□□ -0.48
CASS4-203ENST00000497244 RRBP1Q9P2E9 1410 aaKnown RBP12.05□□□□□ -0.48
CASS4-203ENST00000497244 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
CASS4-203ENST00000497244 PLB1Q6P1J6 1458 aa12.04□□□□□ -0.48
CASS4-203ENST00000497244 TMED8Q6PL24 325 aaPredicted RBP12.04□□□□□ -0.48
CASS4-203ENST00000497244 CASKIN1Q8WXD9 1431 aa12.04□□□□□ -0.48
CASS4-203ENST00000497244 TIAM1Q13009 1591 aa12.03□□□□□ -0.48
CASS4-203ENST00000497244 ZMYND15Q9H091 742 aa12.03□□□□□ -0.48
CASS4-203ENST00000497244 CDK13Q14004 1512 aaKnown RBP12.02□□□□□ -0.48
CASS4-203ENST00000497244 MAGI3Q5TCQ9 1506 aa12.02□□□□□ -0.48
CASS4-203ENST00000497244 RGS22Q8NE09 1264 aa12.02□□□□□ -0.48
CASS4-203ENST00000497244 CWC22Q9HCG8 908 aaKnown RBP12.02□□□□□ -0.48
CASS4-203ENST00000497244 MTMR7Q9Y216 660 aa12.02□□□□□ -0.48
CASS4-203ENST00000497244 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.48
CASS4-203ENST00000497244 FMN1Q68DA7 1419 aa12.02□□□□□ -0.49
CASS4-203ENST00000497244 RBM25P49756 843 aaKnown RBP12.01□□□□□ -0.49
CASS4-203ENST00000497244 RAPGEF6Q8TEU7 1601 aa12□□□□□ -0.49
CASS4-203ENST00000497244 FOXD4L5Q5VV16 416 aaPredicted RBP12□□□□□ -0.49
CASS4-203ENST00000497244 FOXD4L4Q8WXT5 416 aaPredicted RBP12□□□□□ -0.49
CASS4-203ENST00000497244 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
CASS4-203ENST00000497244 NUP153P49790 1475 aaKnown RBP12□□□□□ -0.49
CASS4-203ENST00000497244 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
CASS4-203ENST00000497244 CARMIL2Q6F5E8 1435 aa11.98□□□□□ -0.49
CASS4-203ENST00000497244 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
CASS4-203ENST00000497244 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
CASS4-203ENST00000497244 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
CASS4-203ENST00000497244 ABCA8O94911 1581 aa11.98□□□□□ -0.49
CASS4-203ENST00000497244 EPRSP07814 1512 aaKnown RBP11.97□□□□□ -0.49
CASS4-203ENST00000497244 LRRC9Q6ZRR7 1453 aa11.96□□□□□ -0.49
CASS4-203ENST00000497244 HECW1Q76N89 1606 aa11.96□□□□□ -0.49
CASS4-203ENST00000497244 FAM177A1Q8N128 213 aaPredicted RBP11.96□□□□□ -0.49
CASS4-203ENST00000497244 PSMD1Q99460 953 aa11.96□□□□□ -0.49
CASS4-203ENST00000497244 CLSTN1O94985 981 aa11.95□□□□□ -0.5
CASS4-203ENST00000497244 PTPRGP23470 1445 aa11.95□□□□□ -0.5
CASS4-203ENST00000497244 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
CASS4-203ENST00000497244 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
CASS4-203ENST00000497244 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
CASS4-203ENST00000497244 PHLDB1Q86UU1 1377 aa11.91□□□□□ -0.5
CASS4-203ENST00000497244 ATP10BO94823 1461 aa11.9□□□□□ -0.5
CASS4-203ENST00000497244 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
CASS4-203ENST00000497244 ADCY10Q96PN6 1610 aa11.89□□□□□ -0.51
CASS4-203ENST00000497244 DHX57Q6P158 1386 aaKnown RBP11.89□□□□□ -0.51
CASS4-203ENST00000497244 UACAQ9BZF9 1416 aa11.88□□□□□ -0.51
CASS4-203ENST00000497244 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
CASS4-203ENST00000497244 KIF14Q15058 1648 aa11.88□□□□□ -0.51
CASS4-203ENST00000497244 RBM10P98175 930 aaKnown RBP11.88□□□□□ -0.51
CASS4-203ENST00000497244 ANP32EQ9BTT0 268 aa11.88□□□□□ -0.51
CASS4-203ENST00000497244 CCNB3Q8WWL7 1395 aa11.88□□□□□ -0.51
CASS4-203ENST00000497244 CCDC18Q5T9S5 1454 aa11.87□□□□□ -0.51
CASS4-203ENST00000497244 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
CASS4-203ENST00000497244 PRDM16Q9HAZ2 1276 aa11.87□□□□□ -0.51
CASS4-203ENST00000497244 RIMBP3CA6NJZ7 1639 aa11.87□□□□□ -0.51
CASS4-203ENST00000497244 RIMBP3BA6NNM3 1639 aa11.87□□□□□ -0.51
CASS4-203ENST00000497244 RIMBP3Q9UFD9 1639 aa11.87□□□□□ -0.51
CASS4-203ENST00000497244 ABCC2Q92887 1545 aa11.86□□□□□ -0.51
CASS4-203ENST00000497244 ZNF526Q8TF50 670 aaPredicted RBP11.86□□□□□ -0.51
CASS4-203ENST00000497244 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
CASS4-203ENST00000497244 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
CASS4-203ENST00000497244 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
CASS4-203ENST00000497244 MTUS2Q5JR59 1369 aa11.85□□□□□ -0.51
CASS4-203ENST00000497244 DIEXFQ68CQ4 756 aaKnown RBP11.85□□□□□ -0.51
CASS4-203ENST00000497244 NCOA2Q15596 1464 aa11.85□□□□□ -0.51
CASS4-203ENST00000497244 ARID4BQ4LE39 1312 aaPredicted RBP11.85□□□□□ -0.51
CASS4-203ENST00000497244 EHBP1L1Q8N3D4 1523 aa11.85□□□□□ -0.51
CASS4-203ENST00000497244 NCLP19338 710 aaKnown RBP11.84□□□□□ -0.51
CASS4-203ENST00000497244 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
CASS4-203ENST00000497244 NEUROD2Q15784 382 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms