RNA–Protein interactions for RNA: ENST00000497061.1

C1S-217, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-217ENST00000497061 COL17A1Q9UMD9 1497 aaPredicted RBP27.51■■■□□ 2
C1S-217ENST00000497061 NCOA2Q15596 1464 aa27.51■■□□□ 1.99
C1S-217ENST00000497061 PHLDB1Q86UU1 1377 aa27.5■■□□□ 1.99
C1S-217ENST00000497061 GPATCH8Q9UKJ3 1502 aaKnown RBP27.5■■□□□ 1.99
C1S-217ENST00000497061 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
C1S-217ENST00000497061 EFCAB2Q5VUJ9 269 aa27.49■■□□□ 1.99
C1S-217ENST00000497061 AKNAQ7Z591 1439 aa27.49■■□□□ 1.99
C1S-217ENST00000497061 ITSN2Q9NZM3 1697 aa27.47■■□□□ 1.99
C1S-217ENST00000497061 ADGRL1O94910 1474 aa27.41■■□□□ 1.98
C1S-217ENST00000497061 CFDP1Q9UEE9 299 aaPredicted RBP27.4■■□□□ 1.98
C1S-217ENST00000497061 RICTORQ6R327 1708 aa27.38■■□□□ 1.97
C1S-217ENST00000497061 ZNF777Q9ULD5 760 aaPredicted RBP27.38■■□□□ 1.97
C1S-217ENST00000497061 SAMD9LQ8IVG5 1584 aa27.37■■□□□ 1.97
C1S-217ENST00000497061 SCAPERQ9BY12 1400 aa27.37■■□□□ 1.97
C1S-217ENST00000497061 FRMPD1Q5SYB0 1578 aa27.36■■□□□ 1.97
C1S-217ENST00000497061 RAPGEF3O95398 923 aa27.36■■□□□ 1.97
C1S-217ENST00000497061 DENND4BO75064 1496 aaPredicted RBP27.36■■□□□ 1.97
C1S-217ENST00000497061 ABCC1P33527 1531 aa27.34■■□□□ 1.97
C1S-217ENST00000497061 PPARGC1BQ86YN6 1023 aaKnown RBP27.31■■□□□ 1.96
C1S-217ENST00000497061 MYOM3Q5VTT5 1437 aa27.3■■□□□ 1.96
C1S-217ENST00000497061 ARHGEF12Q9NZN5 1544 aa27.3■■□□□ 1.96
C1S-217ENST00000497061 POGZQ7Z3K3 1410 aa27.28■■□□□ 1.96
C1S-217ENST00000497061 ZNF644Q9H582 1327 aaPredicted RBP27.28■■□□□ 1.96
C1S-217ENST00000497061 SYCP2Q9BX26 1530 aa27.26■■□□□ 1.96
C1S-217ENST00000497061 PLEKHH2Q8IVE3 1493 aa27.26■■□□□ 1.95
C1S-217ENST00000497061 HNRNPMP52272 730 aaKnown RBP eCLIP27.24■■□□□ 1.95
C1S-217ENST00000497061 CAMSAP2Q08AD1 1489 aa27.24■■□□□ 1.95
C1S-217ENST00000497061 ZNF518AQ6AHZ1 1483 aa27.24■■□□□ 1.95
C1S-217ENST00000497061 TRAPPC8Q9Y2L5 1435 aa27.24■■□□□ 1.95
C1S-217ENST00000497061 ZMYM4Q5VZL5 1548 aa27.23■■□□□ 1.95
C1S-217ENST00000497061 AFAP1Q8N556 730 aa27.23■■□□□ 1.95
C1S-217ENST00000497061 MIA2Q96PC5 1412 aa27.23■■□□□ 1.95
C1S-217ENST00000497061 KIAA1107Q9UPP5 1409 aa27.23■■□□□ 1.95
C1S-217ENST00000497061 KDM5CP41229 1560 aa27.2■■□□□ 1.94
C1S-217ENST00000497061 PTPN23Q9H3S7 1636 aa27.18■■□□□ 1.94
C1S-217ENST00000497061 FGD6Q6ZV73 1430 aa27.16■■□□□ 1.94
C1S-217ENST00000497061 MBD5Q9P267 1494 aa27.16■■□□□ 1.94
C1S-217ENST00000497061 HECW2Q9P2P5 1572 aa27.15■■□□□ 1.94
C1S-217ENST00000497061 MAGI2Q86UL8 1455 aa27.14■■□□□ 1.94
C1S-217ENST00000497061 ZFYVE16Q7Z3T8 1539 aa27.13■■□□□ 1.93
C1S-217ENST00000497061 ARHGEF40Q8TER5 1519 aa27.12■■□□□ 1.93
C1S-217ENST00000497061 YEATS2Q9ULM3 1422 aa27.12■■□□□ 1.93
C1S-217ENST00000497061 ARHGEF5Q12774 1597 aa27.11■■□□□ 1.93
C1S-217ENST00000497061 MYT1LQ9UL68 1186 aa27.11■■□□□ 1.93
C1S-217ENST00000497061 KIDINS220Q9ULH0 1771 aa27.11■■□□□ 1.93
C1S-217ENST00000497061 MLH3Q9UHC1 1453 aa27.11■■□□□ 1.93
C1S-217ENST00000497061 TCOF1Q13428 1488 aaKnown RBP27.1■■□□□ 1.93
C1S-217ENST00000497061 CCDC141Q6ZP82 1450 aa27.08■■□□□ 1.93
C1S-217ENST00000497061 SPAG9O60271 1321 aaKnown RBP27.08■■□□□ 1.93
C1S-217ENST00000497061 RSPH4AQ5TD94 716 aa27.07■■□□□ 1.92
C1S-217ENST00000497061 INO80Q9ULG1 1556 aaPredicted RBP27.06■■□□□ 1.92
C1S-217ENST00000497061 ABCA6Q8N139 1617 aa27.05■■□□□ 1.92
C1S-217ENST00000497061 ATP7AQ04656 1500 aa27.05■■□□□ 1.92
C1S-217ENST00000497061 DIP2CQ9Y2E4 1556 aa27.04■■□□□ 1.92
C1S-217ENST00000497061 ATP10AO60312 1499 aa27.02■■□□□ 1.92
C1S-217ENST00000497061 FAM50AQ14320 339 aaKnown RBP27.02■■□□□ 1.92
C1S-217ENST00000497061 SIGLEC1Q9BZZ2 1709 aa27.01■■□□□ 1.91
C1S-217ENST00000497061 CROCC2H7BZ55 1655 aa27.01■■□□□ 1.91
C1S-217ENST00000497061 DNMT1P26358 1616 aaKnown RBP27.01■■□□□ 1.91
C1S-217ENST00000497061 TSPY4P0CV99 314 aa26.98■■□□□ 1.91
C1S-217ENST00000497061 TSPY10P0CW01 314 aa26.98■■□□□ 1.91
C1S-217ENST00000497061 RTEL1-TNFRSF6BF6WH68 1400 aa26.98■■□□□ 1.91
C1S-217ENST00000497061 ABCC5O15440 1437 aa26.97■■□□□ 1.91
C1S-217ENST00000497061 C9orf84Q5VXU9 1444 aa26.97■■□□□ 1.91
C1S-217ENST00000497061 MAST1Q9Y2H9 1570 aa26.97■■□□□ 1.91
C1S-217ENST00000497061 DAPK1P53355 1430 aa26.96■■□□□ 1.91
C1S-217ENST00000497061 ADGBQ8N7X0 1667 aa26.95■■□□□ 1.91
C1S-217ENST00000497061 REREQ9P2R6 1566 aa26.93■■□□□ 1.9
C1S-217ENST00000497061 ARID4BQ4LE39 1312 aaPredicted RBP26.92■■□□□ 1.9
C1S-217ENST00000497061 RRBP1Q9P2E9 1410 aaKnown RBP26.9■■□□□ 1.9
C1S-217ENST00000497061 SHANK2Q9UPX8 1470 aa26.9■■□□□ 1.9
C1S-217ENST00000497061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.88■■□□□ 1.89
C1S-217ENST00000497061 BCORL1Q5H9F3 1711 aa26.87■■□□□ 1.89
C1S-217ENST00000497061 A2MP01023 1474 aa26.87■■□□□ 1.89
C1S-217ENST00000497061 PLXNC1O60486 1568 aa26.86■■□□□ 1.89
C1S-217ENST00000497061 CHIC2Q9UKJ5 165 aa26.85■■□□□ 1.89
C1S-217ENST00000497061 KDM4FA0A1W2PPD8 638 aa26.83■■□□□ 1.89
C1S-217ENST00000497061 AGLP35573 1532 aa26.83■■□□□ 1.89
C1S-217ENST00000497061 ITGAEP38570 1179 aa26.81■■□□□ 1.88
C1S-217ENST00000497061 ADAMTSL3P82987 1691 aa26.81■■□□□ 1.88
C1S-217ENST00000497061 DHX29Q7Z478 1369 aaKnown RBP26.81■■□□□ 1.88
C1S-217ENST00000497061 PTPRKQ15262 1439 aa26.81■■□□□ 1.88
C1S-217ENST00000497061 MLECQ14165 292 aa26.8■■□□□ 1.88
C1S-217ENST00000497061 RRP7BPQ9NSQ0 103 aa26.78■■□□□ 1.88
C1S-217ENST00000497061 ANKRD30AQ9BXX3 1397 aa26.77■■□□□ 1.88
C1S-217ENST00000497061 ADGRL2O95490 1459 aa26.76■■□□□ 1.87
C1S-217ENST00000497061 DUOX2Q9NRD8 1548 aa26.75■■□□□ 1.87
C1S-217ENST00000497061 NCOA1Q15788 1441 aa26.75■■□□□ 1.87
C1S-217ENST00000497061 KIF15Q9NS87 1388 aa26.75■■□□□ 1.87
C1S-217ENST00000497061 FER1L4A9Z1Z3 1794 aa26.75■■□□□ 1.87
C1S-217ENST00000497061 MADDQ8WXG6 1647 aa26.75■■□□□ 1.87
C1S-217ENST00000497061 RIMS1Q86UR5 1692 aaKnown RBP26.71■■□□□ 1.87
C1S-217ENST00000497061 EIF2AK4Q9P2K8 1649 aaKnown RBP26.7■■□□□ 1.86
C1S-217ENST00000497061 KIF3BO15066 747 aa26.69■■□□□ 1.86
C1S-217ENST00000497061 ROCK1Q13464 1354 aa26.68■■□□□ 1.86
C1S-217ENST00000497061 GGT6Q6P531 493 aa26.67■■□□□ 1.86
C1S-217ENST00000497061 ERBINQ96RT1 1412 aa26.65■■□□□ 1.86
C1S-217ENST00000497061 RNF17Q9BXT8 1623 aaKnown RBP26.64■■□□□ 1.85
C1S-217ENST00000497061 CLTCQ00610 1675 aaKnown RBP26.61■■□□□ 1.85
C1S-217ENST00000497061 PTPRMP28827 1452 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms