RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
VPS26A-208ENST00000497022 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
VPS26A-208ENST00000497022 RNF166Q96A37 237 aaPredicted RBP10.82□□□□□ -0.68
VPS26A-208ENST00000497022 PHF8Q9UPP1 1060 aa10.82□□□□□ -0.68
VPS26A-208ENST00000497022 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
VPS26A-208ENST00000497022 PTGER2P43116 358 aa10.78□□□□□ -0.68
VPS26A-208ENST00000497022 NLRP6P59044 892 aa10.78□□□□□ -0.68
VPS26A-208ENST00000497022 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
VPS26A-208ENST00000497022 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
VPS26A-208ENST00000497022 ARSIQ5FYB1 569 aa10.72□□□□□ -0.69
VPS26A-208ENST00000497022 BCL11BQ9C0K0 894 aaPredicted RBP10.71□□□□□ -0.69
VPS26A-208ENST00000497022 ZNF316A6NFI3 1004 aaPredicted RBP10.7□□□□□ -0.7
VPS26A-208ENST00000497022 STK24Q9Y6E0 443 aa10.66□□□□□ -0.7
VPS26A-208ENST00000497022 KIF3CO14782 793 aa10.65□□□□□ -0.7
VPS26A-208ENST00000497022 MFRPQ9BY79 579 aa10.65□□□□□ -0.7
VPS26A-208ENST00000497022 PBX2P40425 430 aa10.63□□□□□ -0.71
VPS26A-208ENST00000497022 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS26A-208ENST00000497022 ANKRD13DQ6ZTN6 518 aa10.63□□□□□ -0.71
VPS26A-208ENST00000497022 KHSRPQ92945 711 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS26A-208ENST00000497022 C2orf72A6NCS6 295 aa10.61□□□□□ -0.71
VPS26A-208ENST00000497022 STK25O00506 426 aa10.61□□□□□ -0.71
VPS26A-208ENST00000497022 SLC34A2O95436 690 aa10.61□□□□□ -0.71
VPS26A-208ENST00000497022 NUDT7P0C024 238 aa10.57□□□□□ -0.72
VPS26A-208ENST00000497022 PCDHGA4Q9Y5G9 962 aa10.55□□□□□ -0.72
VPS26A-208ENST00000497022 ECM2O94769 699 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-208ENST00000497022 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
VPS26A-208ENST00000497022 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
VPS26A-208ENST00000497022 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
VPS26A-208ENST00000497022 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
VPS26A-208ENST00000497022 AXIN2Q9Y2T1 843 aa10.46□□□□□ -0.73
VPS26A-208ENST00000497022 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
VPS26A-208ENST00000497022 RGL2O15211 777 aa10.45□□□□□ -0.74
VPS26A-208ENST00000497022 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
VPS26A-208ENST00000497022 ADGRD1Q6QNK2 874 aa10.44□□□□□ -0.74
VPS26A-208ENST00000497022 PKD2Q13563 968 aa10.43□□□□□ -0.74
VPS26A-208ENST00000497022 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
VPS26A-208ENST00000497022 KDM4FA0A1W2PPD8 638 aa10.42□□□□□ -0.74
VPS26A-208ENST00000497022 TK2O00142 265 aa10.42□□□□□ -0.74
VPS26A-208ENST00000497022 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
VPS26A-208ENST00000497022 PPP1R37O75864 691 aa10.4□□□□□ -0.74
VPS26A-208ENST00000497022 FOXK1P85037 733 aa10.39□□□□□ -0.75
VPS26A-208ENST00000497022 HRO43593 1189 aa10.35□□□□□ -0.75
VPS26A-208ENST00000497022 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
VPS26A-208ENST00000497022 GPHNQ9NQX3 736 aaPredicted RBP10.35□□□□□ -0.75
VPS26A-208ENST00000497022 TBC1D12O60347 775 aa10.34□□□□□ -0.75
VPS26A-208ENST00000497022 PLPP6Q8IY26 295 aa10.34□□□□□ -0.75
VPS26A-208ENST00000497022 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
VPS26A-208ENST00000497022 PSEN2P49810 448 aa10.31□□□□□ -0.76
VPS26A-208ENST00000497022 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
VPS26A-208ENST00000497022 HS6ST3Q8IZP7 471 aa10.3□□□□□ -0.76
VPS26A-208ENST00000497022 DSG2Q14126 1118 aa10.29□□□□□ -0.76
VPS26A-208ENST00000497022 STAC3Q96MF2 364 aa10.27□□□□□ -0.77
VPS26A-208ENST00000497022 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
VPS26A-208ENST00000497022 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
VPS26A-208ENST00000497022 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
VPS26A-208ENST00000497022 SLC4A5Q9BY07 1137 aa10.21□□□□□ -0.77
VPS26A-208ENST00000497022 RYDENQ9NUL5 291 aaKnown RBP10.21□□□□□ -0.77
VPS26A-208ENST00000497022 VPS9D1Q9Y2B5 631 aa10.21□□□□□ -0.77
VPS26A-208ENST00000497022 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
VPS26A-208ENST00000497022 BCL2L12Q9HB09 334 aa10.2□□□□□ -0.78
VPS26A-208ENST00000497022 IFFO2Q5TF58 517 aa10.17□□□□□ -0.78
VPS26A-208ENST00000497022 ZNF454Q8N9F8 522 aa10.17□□□□□ -0.78
VPS26A-208ENST00000497022 CRISPLD2Q9H0B8 497 aa10.17□□□□□ -0.78
VPS26A-208ENST00000497022 RGS20O76081 388 aa10.15□□□□□ -0.78
VPS26A-208ENST00000497022 CHGAP10645 457 aaKnown RBP10.15□□□□□ -0.78
VPS26A-208ENST00000497022 UPF1Q92900 1129 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS26A-208ENST00000497022 FOSBP53539 338 aa10.14□□□□□ -0.79
VPS26A-208ENST00000497022 PPP1R15BQ5SWA1 713 aa10.14□□□□□ -0.79
VPS26A-208ENST00000497022 PTPREP23469 700 aa10.13□□□□□ -0.79
VPS26A-208ENST00000497022 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
VPS26A-208ENST00000497022 PTPN5P54829 565 aa10.11□□□□□ -0.79
VPS26A-208ENST00000497022 NKX1-1Q15270 411 aaPredicted RBP10.11□□□□□ -0.79
VPS26A-208ENST00000497022 THSD4Q6ZMP0 1018 aa10.11□□□□□ -0.79
VPS26A-208ENST00000497022 JPH4Q96JJ6 628 aa10.11□□□□□ -0.79
VPS26A-208ENST00000497022 ZBED2Q9BTP6 218 aa10.1□□□□□ -0.79
VPS26A-208ENST00000497022 ANO8Q9HCE9 1232 aaPredicted RBP10.1□□□□□ -0.79
VPS26A-208ENST00000497022 GOLGA8CPA6NN73 597 aa10.08□□□□□ -0.8
VPS26A-208ENST00000497022 PDE4AP27815 886 aa10.08□□□□□ -0.8
VPS26A-208ENST00000497022 MRPL50Q8N5N7 158 aaKnown RBP10.07□□□□□ -0.8
VPS26A-208ENST00000497022 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
VPS26A-208ENST00000497022 WNT2BQ93097 391 aa10.06□□□□□ -0.8
VPS26A-208ENST00000497022 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
VPS26A-208ENST00000497022 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
VPS26A-208ENST00000497022 A0A0G2JS52 829 aa10.04□□□□□ -0.8
VPS26A-208ENST00000497022 EVI5O60447 810 aa10.04□□□□□ -0.8
VPS26A-208ENST00000497022 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
VPS26A-208ENST00000497022 PPP1R3GB7ZBB8 358 aa10□□□□□ -0.81
VPS26A-208ENST00000497022 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
VPS26A-208ENST00000497022 IRX2Q9BZI1 471 aaPredicted RBP10□□□□□ -0.81
VPS26A-208ENST00000497022 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
VPS26A-208ENST00000497022 MFSD10Q14728 455 aa9.98□□□□□ -0.81
VPS26A-208ENST00000497022 LARP6Q9BRS8 491 aaKnown RBP9.97□□□□□ -0.81
VPS26A-208ENST00000497022 RABGEF1Q9UJ41 708 aa9.97□□□□□ -0.81
VPS26A-208ENST00000497022 ANKK1Q8NFD2 765 aa9.95□□□□□ -0.82
VPS26A-208ENST00000497022 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
VPS26A-208ENST00000497022 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
VPS26A-208ENST00000497022 FBXW7Q969H0 707 aa9.94□□□□□ -0.82
VPS26A-208ENST00000497022 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
VPS26A-208ENST00000497022 PCDHGA10Q9Y5H3 936 aa9.93□□□□□ -0.82
VPS26A-208ENST00000497022 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms