RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TMEM121BQ9BXQ6 578 aaPredicted RBP5.67□□□□□ -1.5
SNRNP48-202ENST00000496946 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.67□□□□□ -1.5
SNRNP48-202ENST00000496946 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
SNRNP48-202ENST00000496946 DSG2Q14126 1118 aa5.66□□□□□ -1.5
SNRNP48-202ENST00000496946 HAP1P54257 671 aaPredicted RBP5.65□□□□□ -1.5
SNRNP48-202ENST00000496946 TTBK1Q5TCY1 1321 aaPredicted RBP5.65□□□□□ -1.51
SNRNP48-202ENST00000496946 LARP6Q9BRS8 491 aaKnown RBP5.64□□□□□ -1.51
SNRNP48-202ENST00000496946 DNAJC5Q9H3Z4 198 aa5.64□□□□□ -1.51
SNRNP48-202ENST00000496946 SCUBE2Q9NQ36 999 aa5.64□□□□□ -1.51
SNRNP48-202ENST00000496946 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.64□□□□□ -1.51
SNRNP48-202ENST00000496946 KDM2AQ9Y2K7 1162 aa5.64□□□□□ -1.51
SNRNP48-202ENST00000496946 G3V3G9 751 aa5.64□□□□□ -1.51
SNRNP48-202ENST00000496946 UPF1Q92900 1129 aaKnown RBP eCLIP5.64□□□□□ -1.51
SNRNP48-202ENST00000496946 FAM163AQ96GL9 167 aaPredicted RBP5.63□□□□□ -1.51
SNRNP48-202ENST00000496946 KIF3CO14782 793 aa5.61□□□□□ -1.51
SNRNP48-202ENST00000496946 L3MBTL3Q96JM7 780 aaPredicted RBP5.61□□□□□ -1.51
SNRNP48-202ENST00000496946 HOXB3P14651 431 aaPredicted RBP5.61□□□□□ -1.51
SNRNP48-202ENST00000496946 ST18O60284 1047 aa5.6□□□□□ -1.51
SNRNP48-202ENST00000496946 CRISPLD2Q9H0B8 497 aa5.6□□□□□ -1.51
SNRNP48-202ENST00000496946 PLPP6Q8IY26 295 aa5.59□□□□□ -1.52
SNRNP48-202ENST00000496946 TMC2Q8TDI7 906 aa5.59□□□□□ -1.52
SNRNP48-202ENST00000496946 GPHNQ9NQX3 736 aaPredicted RBP5.59□□□□□ -1.52
SNRNP48-202ENST00000496946 EMILIN3Q9NT22 766 aa5.59□□□□□ -1.52
SNRNP48-202ENST00000496946 ARSIQ5FYB1 569 aa5.58□□□□□ -1.52
SNRNP48-202ENST00000496946 NUDT7P0C024 238 aa5.57□□□□□ -1.52
SNRNP48-202ENST00000496946 DDX27Q96GQ7 796 aaKnown RBP5.57□□□□□ -1.52
SNRNP48-202ENST00000496946 PPP1R15BQ5SWA1 713 aa5.56□□□□□ -1.52
SNRNP48-202ENST00000496946 POTEB3A0JP26 581 aa5.56□□□□□ -1.52
SNRNP48-202ENST00000496946 POTEBQ6S5H4 581 aa5.56□□□□□ -1.52
SNRNP48-202ENST00000496946 DPYSL4O14531 572 aa5.55□□□□□ -1.52
SNRNP48-202ENST00000496946 FOXK1P85037 733 aa5.55□□□□□ -1.52
SNRNP48-202ENST00000496946 KCNV2Q8TDN2 545 aa5.55□□□□□ -1.52
SNRNP48-202ENST00000496946 MAMSTRQ6ZN01 415 aa5.54□□□□□ -1.52
SNRNP48-202ENST00000496946 FAM205CA6NFA0 338 aa5.53□□□□□ -1.52
SNRNP48-202ENST00000496946 GPR153Q6NV75 609 aa5.53□□□□□ -1.52
SNRNP48-202ENST00000496946 RYDENQ9NUL5 291 aaKnown RBP5.53□□□□□ -1.52
SNRNP48-202ENST00000496946 ZNF710Q8N1W2 664 aa5.52□□□□□ -1.53
SNRNP48-202ENST00000496946 AXIN2Q9Y2T1 843 aa5.52□□□□□ -1.53
SNRNP48-202ENST00000496946 POTEMA6NI47 508 aa5.5□□□□□ -1.53
SNRNP48-202ENST00000496946 PDE4AP27815 886 aa5.5□□□□□ -1.53
SNRNP48-202ENST00000496946 POTEGQ6S5H5 508 aa5.5□□□□□ -1.53
SNRNP48-202ENST00000496946 DDX12PQ92771 950 aa5.5□□□□□ -1.53
SNRNP48-202ENST00000496946 DAXXQ9UER7 740 aaPredicted RBP5.5□□□□□ -1.53
SNRNP48-202ENST00000496946 EMP3P54852 163 aa5.49□□□□□ -1.53
SNRNP48-202ENST00000496946 VARS2Q5ST30 1063 aaKnown RBP5.49□□□□□ -1.53
SNRNP48-202ENST00000496946 PCDHGA4Q9Y5G9 962 aa5.49□□□□□ -1.53
SNRNP48-202ENST00000496946 LHX6Q9UPM6 363 aa5.48□□□□□ -1.53
SNRNP48-202ENST00000496946 SEMA3EO15041 775 aa5.47□□□□□ -1.53
SNRNP48-202ENST00000496946 MLLT3P42568 568 aaPredicted RBP5.47□□□□□ -1.53
SNRNP48-202ENST00000496946 MFSD10Q14728 455 aa5.47□□□□□ -1.53
SNRNP48-202ENST00000496946 E2F4Q16254 413 aa5.47□□□□□ -1.53
SNRNP48-202ENST00000496946 POTEEQ6S8J3 1075 aa5.46□□□□□ -1.53
SNRNP48-202ENST00000496946 HS3ST6Q96QI5 342 aa5.46□□□□□ -1.53
SNRNP48-202ENST00000496946 PRIM1P49642 420 aaKnown RBP5.45□□□□□ -1.54
SNRNP48-202ENST00000496946 OXER1Q8TDS5 423 aa5.45□□□□□ -1.54
SNRNP48-202ENST00000496946 WDR70Q9NW82 654 aa5.45□□□□□ -1.54
SNRNP48-202ENST00000496946 MAP3K9P80192 1104 aa5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 GRXCR2A6NFK2 248 aa5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 DOK7Q18PE1 504 aa5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 ERICH6Q7L0X2 663 aa5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 PTCD2Q8WV60 388 aaKnown RBP5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 KDM4FA0A1W2PPD8 638 aa5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 EVI5O60447 810 aa5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 HOXB1P14653 301 aaPredicted RBP5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 PSEN2P49810 448 aa5.44□□□□□ -1.54
SNRNP48-202ENST00000496946 ERBB3P21860 1342 aa5.43□□□□□ -1.54
SNRNP48-202ENST00000496946 RBM33Q96EV2 1170 aaKnown RBP5.43□□□□□ -1.54
SNRNP48-202ENST00000496946 CAMK2BQ13554 666 aa5.43□□□□□ -1.54
SNRNP48-202ENST00000496946 TSR1Q2NL82 804 aaKnown RBP5.43□□□□□ -1.54
SNRNP48-202ENST00000496946 PRKCSHP14314 528 aaPredicted RBP5.42□□□□□ -1.54
SNRNP48-202ENST00000496946 ZNF454Q8N9F8 522 aa5.42□□□□□ -1.54
SNRNP48-202ENST00000496946 RIMBP2O15034 1052 aa5.41□□□□□ -1.54
SNRNP48-202ENST00000496946 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
SNRNP48-202ENST00000496946 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
SNRNP48-202ENST00000496946 PCDHGA10Q9Y5H3 936 aa5.41□□□□□ -1.54
SNRNP48-202ENST00000496946 SLC34A2O95436 690 aa5.4□□□□□ -1.54
SNRNP48-202ENST00000496946 CDAN1Q8IWY9 1227 aa5.4□□□□□ -1.55
SNRNP48-202ENST00000496946 ADAM33Q9BZ11 813 aa5.39□□□□□ -1.55
SNRNP48-202ENST00000496946 ZNF316A6NFI3 1004 aaPredicted RBP5.39□□□□□ -1.55
SNRNP48-202ENST00000496946 SNPHO15079 494 aa5.39□□□□□ -1.55
SNRNP48-202ENST00000496946 NBR1Q14596 966 aa5.39□□□□□ -1.55
SNRNP48-202ENST00000496946 CDHR5Q9HBB8 845 aa5.39□□□□□ -1.55
SNRNP48-202ENST00000496946 PCDH10Q9P2E7 1040 aa5.38□□□□□ -1.55
SNRNP48-202ENST00000496946 PDIA6Q15084 440 aa5.38□□□□□ -1.55
SNRNP48-202ENST00000496946 FAM161AQ3B820 660 aa5.38□□□□□ -1.55
SNRNP48-202ENST00000496946 RBM26Q5T8P6 1007 aaKnown RBP5.38□□□□□ -1.55
SNRNP48-202ENST00000496946 KCNK17Q96T54 332 aa5.38□□□□□ -1.55
SNRNP48-202ENST00000496946 PROX2Q3B8N5 592 aa5.37□□□□□ -1.55
SNRNP48-202ENST00000496946 DMRTA1Q5VZB9 504 aa5.37□□□□□ -1.55
SNRNP48-202ENST00000496946 ANKRD13DQ6ZTN6 518 aa5.36□□□□□ -1.55
SNRNP48-202ENST00000496946 C3orf80F5H4A9 247 aa5.36□□□□□ -1.55
SNRNP48-202ENST00000496946 COL9A1P20849 921 aa5.36□□□□□ -1.55
SNRNP48-202ENST00000496946 VSIG10Q8N0Z9 540 aa5.36□□□□□ -1.55
SNRNP48-202ENST00000496946 MAP3K7O43318 606 aa5.35□□□□□ -1.55
SNRNP48-202ENST00000496946 TBC1D12O60347 775 aa5.35□□□□□ -1.55
SNRNP48-202ENST00000496946 FOSBP53539 338 aa5.34□□□□□ -1.55
SNRNP48-202ENST00000496946 NLRP7Q8WX94 980 aa5.34□□□□□ -1.55
SNRNP48-202ENST00000496946 SMAPO00193 183 aa5.34□□□□□ -1.55
SNRNP48-202ENST00000496946 OSBPP22059 807 aa5.34□□□□□ -1.55
SNRNP48-202ENST00000496946 FECHP22830 423 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms