RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 TMEM92Q6UXU6 159 aa16.8■□□□□ 0.28
TARDBP-210ENST00000496840 SNPHO15079 494 aa16.75■□□□□ 0.27
TARDBP-210ENST00000496840 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
TARDBP-210ENST00000496840 KIF3CO14782 793 aa16.71■□□□□ 0.27
TARDBP-210ENST00000496840 C2orf72A6NCS6 295 aa16.66■□□□□ 0.26
TARDBP-210ENST00000496840 TMC2Q8TDI7 906 aa16.66■□□□□ 0.26
TARDBP-210ENST00000496840 FAM163AQ96GL9 167 aaPredicted RBP16.64■□□□□ 0.25
TARDBP-210ENST00000496840 PAXIP1Q6ZW49 1069 aaPredicted RBP16.63■□□□□ 0.25
TARDBP-210ENST00000496840 HOXB3P14651 431 aaPredicted RBP16.61■□□□□ 0.25
TARDBP-210ENST00000496840 GPHNQ9NQX3 736 aaPredicted RBP16.61■□□□□ 0.25
TARDBP-210ENST00000496840 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
TARDBP-210ENST00000496840 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
TARDBP-210ENST00000496840 CRISPLD2Q9H0B8 497 aa16.58■□□□□ 0.24
TARDBP-210ENST00000496840 ST18O60284 1047 aa16.57■□□□□ 0.24
TARDBP-210ENST00000496840 FOXK1P85037 733 aa16.55■□□□□ 0.24
TARDBP-210ENST00000496840 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
TARDBP-210ENST00000496840 PDE4AP27815 886 aa16.53■□□□□ 0.24
TARDBP-210ENST00000496840 RIMBP2O15034 1052 aa16.51■□□□□ 0.23
TARDBP-210ENST00000496840 CADPS2Q86UW7 1296 aa16.5■□□□□ 0.23
TARDBP-210ENST00000496840 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
TARDBP-210ENST00000496840 ZSWIM6Q9HCJ5 1215 aa16.49■□□□□ 0.23
TARDBP-210ENST00000496840 DSG2Q14126 1118 aa16.48■□□□□ 0.23
TARDBP-210ENST00000496840 SLC34A2O95436 690 aa16.46■□□□□ 0.23
TARDBP-210ENST00000496840 PLPP6Q8IY26 295 aa16.46■□□□□ 0.23
TARDBP-210ENST00000496840 MFSD10Q14728 455 aa16.44■□□□□ 0.22
TARDBP-210ENST00000496840 HOXB1P14653 301 aaPredicted RBP16.43■□□□□ 0.22
TARDBP-210ENST00000496840 PPP1R15BQ5SWA1 713 aa16.42■□□□□ 0.22
TARDBP-210ENST00000496840 LARP6Q9BRS8 491 aaKnown RBP16.42■□□□□ 0.22
TARDBP-210ENST00000496840 GPR153Q6NV75 609 aa16.4■□□□□ 0.22
TARDBP-210ENST00000496840 DDX27Q96GQ7 796 aaKnown RBP16.4■□□□□ 0.22
TARDBP-210ENST00000496840 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
TARDBP-210ENST00000496840 CDAN1Q8IWY9 1227 aa16.35■□□□□ 0.21
TARDBP-210ENST00000496840 PTCD2Q8WV60 388 aaKnown RBP16.35■□□□□ 0.21
TARDBP-210ENST00000496840 MARVELD3Q96A59 401 aa16.34■□□□□ 0.21
TARDBP-210ENST00000496840 EMP3P54852 163 aa16.33■□□□□ 0.2
TARDBP-210ENST00000496840 PCDHGA4Q9Y5G9 962 aa16.33■□□□□ 0.2
TARDBP-210ENST00000496840 ARSIQ5FYB1 569 aa16.32■□□□□ 0.2
TARDBP-210ENST00000496840 TSHZ2Q9NRE2 1034 aa16.28■□□□□ 0.2
TARDBP-210ENST00000496840 OXER1Q8TDS5 423 aa16.27■□□□□ 0.2
TARDBP-210ENST00000496840 TBC1D12O60347 775 aa16.25■□□□□ 0.19
TARDBP-210ENST00000496840 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.191e-10■■■■□ 25
TARDBP-210ENST00000496840 CAMK2BQ13554 666 aa16.23■□□□□ 0.19
TARDBP-210ENST00000496840 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
TARDBP-210ENST00000496840 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
TARDBP-210ENST00000496840 NUDT7P0C024 238 aa16.2■□□□□ 0.18
TARDBP-210ENST00000496840 ERBB3P21860 1342 aa16.19■□□□□ 0.18
TARDBP-210ENST00000496840 UPF1Q92900 1129 aaKnown RBP eCLIP16.19■□□□□ 0.18
TARDBP-210ENST00000496840 HS3ST6Q96QI5 342 aa16.19■□□□□ 0.18
TARDBP-210ENST00000496840 EMILIN3Q9NT22 766 aa16.18■□□□□ 0.18
TARDBP-210ENST00000496840 WDR70Q9NW82 654 aa16.18■□□□□ 0.18
TARDBP-210ENST00000496840 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
TARDBP-210ENST00000496840 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
TARDBP-210ENST00000496840 POTEBQ6S5H4 581 aa16.15■□□□□ 0.18
TARDBP-210ENST00000496840 VARS2Q5ST30 1063 aaKnown RBP16.12■□□□□ 0.17
TARDBP-210ENST00000496840 LHX6Q9UPM6 363 aa16.11■□□□□ 0.17
TARDBP-210ENST00000496840 E2F4Q16254 413 aa16.1■□□□□ 0.17
TARDBP-210ENST00000496840 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
TARDBP-210ENST00000496840 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
TARDBP-210ENST00000496840 HAP1P54257 671 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-210ENST00000496840 ANO8Q9HCE9 1232 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-210ENST00000496840 EVI5O60447 810 aa16.05■□□□□ 0.16
TARDBP-210ENST00000496840 ZNF687Q8N1G0 1237 aa16.05■□□□□ 0.16
TARDBP-210ENST00000496840 MMRN1Q13201 1228 aa16.04■□□□□ 0.16
TARDBP-210ENST00000496840 ARIH1Q9Y4X5 557 aaPredicted RBP16.04■□□□□ 0.16
TARDBP-210ENST00000496840 DPYSL4O14531 572 aa16.01■□□□□ 0.15
TARDBP-210ENST00000496840 SPNS2Q8IVW8 549 aa16■□□□□ 0.15
TARDBP-210ENST00000496840 PPP4R3BQ5MIZ7 849 aa15.95■□□□□ 0.14
TARDBP-210ENST00000496840 KRTAP3-3Q9BYR6 98 aa15.95■□□□□ 0.14
TARDBP-210ENST00000496840 KRTAP3-2Q9BYR7 98 aa15.95■□□□□ 0.14
TARDBP-210ENST00000496840 PDIA6Q15084 440 aa15.94■□□□□ 0.14
TARDBP-210ENST00000496840 SPDYE16A6NNV3 312 aaPredicted RBP15.93■□□□□ 0.14
TARDBP-210ENST00000496840 JPH4Q96JJ6 628 aa15.93■□□□□ 0.14
TARDBP-210ENST00000496840 PBX2P40425 430 aa15.92■□□□□ 0.14
TARDBP-210ENST00000496840 FOSBP53539 338 aa15.92■□□□□ 0.14
TARDBP-210ENST00000496840 ZNF454Q8N9F8 522 aa15.9■□□□□ 0.14
TARDBP-210ENST00000496840 PTGER2P43116 358 aa15.89■□□□□ 0.13
TARDBP-210ENST00000496840 P3H3Q8IVL6 736 aa15.89■□□□□ 0.13
TARDBP-210ENST00000496840 KCNV2Q8TDN2 545 aa15.89■□□□□ 0.13
TARDBP-210ENST00000496840 ARHGEF1Q92888 912 aaKnown RBP15.89■□□□□ 0.13
TARDBP-210ENST00000496840 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
TARDBP-210ENST00000496840 KDM2AQ9Y2K7 1162 aa15.86■□□□□ 0.13
TARDBP-210ENST00000496840 PHF14O94880 888 aa15.85■□□□□ 0.13
TARDBP-210ENST00000496840 POTEEQ6S8J3 1075 aa15.85■□□□□ 0.13
TARDBP-210ENST00000496840 ZDHHC16Q969W1 377 aa15.83■□□□□ 0.12
TARDBP-210ENST00000496840 PCDHGA10Q9Y5H3 936 aa15.83■□□□□ 0.12
TARDBP-210ENST00000496840 ARHGAP33O14559 1287 aa15.82■□□□□ 0.12
TARDBP-210ENST00000496840 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
TARDBP-210ENST00000496840 EPAS1Q99814 870 aa15.8■□□□□ 0.12
TARDBP-210ENST00000496840 TYW1BQ6NUM6 668 aa15.79■□□□□ 0.12
TARDBP-210ENST00000496840 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
TARDBP-210ENST00000496840 AXIN2Q9Y2T1 843 aa15.78■□□□□ 0.12
TARDBP-210ENST00000496840 LSM11P83369 360 aaKnown RBP eCLIP15.77■□□□□ 0.123e-9■■□□□ 11.9
TARDBP-210ENST00000496840 ADAM33Q9BZ11 813 aa15.77■□□□□ 0.12
TARDBP-210ENST00000496840 DDX12PQ92771 950 aa15.76■□□□□ 0.11
TARDBP-210ENST00000496840 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
TARDBP-210ENST00000496840 PTPREP23469 700 aa15.73■□□□□ 0.11
TARDBP-210ENST00000496840 PSEN2P49810 448 aa15.73■□□□□ 0.11
TARDBP-210ENST00000496840 KCNK17Q96T54 332 aa15.72■□□□□ 0.11
TARDBP-210ENST00000496840 NBR1Q14596 966 aa15.69■□□□□ 0.1
TARDBP-210ENST00000496840 ANKRD13DQ6ZTN6 518 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms