RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 MAP3K1Q13233 1512 aa11.98□□□□□ -0.49
CDHR3-214ENST00000496633 EHBP1L1Q8N3D4 1523 aa11.98□□□□□ -0.49
CDHR3-214ENST00000496633 APLP2Q06481 763 aa11.98□□□□□ -0.49
CDHR3-214ENST00000496633 PREX2Q70Z35 1606 aa11.97□□□□□ -0.49
CDHR3-214ENST00000496633 ZNF518AQ6AHZ1 1483 aa11.96□□□□□ -0.49
CDHR3-214ENST00000496633 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.49
CDHR3-214ENST00000496633 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.5
CDHR3-214ENST00000496633 SCAPERQ9BY12 1400 aa11.95□□□□□ -0.5
CDHR3-214ENST00000496633 CCNB3Q8WWL7 1395 aa11.95□□□□□ -0.5
CDHR3-214ENST00000496633 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
CDHR3-214ENST00000496633 RICTORQ6R327 1708 aa11.94□□□□□ -0.5
CDHR3-214ENST00000496633 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
CDHR3-214ENST00000496633 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
CDHR3-214ENST00000496633 CFDP1Q9UEE9 299 aaPredicted RBP11.93□□□□□ -0.5
CDHR3-214ENST00000496633 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
CDHR3-214ENST00000496633 SUPT6HQ7KZ85 1726 aaKnown RBP11.92□□□□□ -0.5
CDHR3-214ENST00000496633 CDC42BPBQ9Y5S2 1711 aa11.92□□□□□ -0.5
CDHR3-214ENST00000496633 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
CDHR3-214ENST00000496633 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
CDHR3-214ENST00000496633 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
CDHR3-214ENST00000496633 KIAA1107Q9UPP5 1409 aa11.91□□□□□ -0.5
CDHR3-214ENST00000496633 FRMPD1Q5SYB0 1578 aa11.91□□□□□ -0.5
CDHR3-214ENST00000496633 ZFYVE16Q7Z3T8 1539 aa11.91□□□□□ -0.5
CDHR3-214ENST00000496633 ARHGEF40Q8TER5 1519 aa11.91□□□□□ -0.5
CDHR3-214ENST00000496633 ABCC1P33527 1531 aa11.89□□□□□ -0.51
CDHR3-214ENST00000496633 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
CDHR3-214ENST00000496633 MLH3Q9UHC1 1453 aa11.89□□□□□ -0.51
CDHR3-214ENST00000496633 KDM5CP41229 1560 aa11.88□□□□□ -0.51
CDHR3-214ENST00000496633 MYT1LQ9UL68 1186 aa11.88□□□□□ -0.51
CDHR3-214ENST00000496633 ARID4BQ4LE39 1312 aaPredicted RBP11.87□□□□□ -0.51
CDHR3-214ENST00000496633 ATP10AO60312 1499 aa11.87□□□□□ -0.51
CDHR3-214ENST00000496633 HECW2Q9P2P5 1572 aa11.87□□□□□ -0.51
CDHR3-214ENST00000496633 KDM4FA0A1W2PPD8 638 aa11.86□□□□□ -0.51
CDHR3-214ENST00000496633 ZNF777Q9ULD5 760 aaPredicted RBP11.86□□□□□ -0.51
CDHR3-214ENST00000496633 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
CDHR3-214ENST00000496633 C9orf84Q5VXU9 1444 aa11.86□□□□□ -0.51
CDHR3-214ENST00000496633 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
CDHR3-214ENST00000496633 AFAP1Q8N556 730 aa11.84□□□□□ -0.51
CDHR3-214ENST00000496633 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
CDHR3-214ENST00000496633 SPAG9O60271 1321 aaKnown RBP11.84□□□□□ -0.51
CDHR3-214ENST00000496633 SAMD9LQ8IVG5 1584 aa11.84□□□□□ -0.51
CDHR3-214ENST00000496633 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
CDHR3-214ENST00000496633 BCORL1Q5H9F3 1711 aa11.81□□□□□ -0.52
CDHR3-214ENST00000496633 RTEL1-TNFRSF6BF6WH68 1400 aa11.81□□□□□ -0.52
CDHR3-214ENST00000496633 YEATS2Q9ULM3 1422 aa11.81□□□□□ -0.52
CDHR3-214ENST00000496633 TRAPPC8Q9Y2L5 1435 aa11.81□□□□□ -0.52
CDHR3-214ENST00000496633 TSPY4P0CV99 314 aa11.8□□□□□ -0.52
CDHR3-214ENST00000496633 TSPY10P0CW01 314 aa11.8□□□□□ -0.52
CDHR3-214ENST00000496633 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDHR3-214ENST00000496633 ADAMTSL3P82987 1691 aa11.8□□□□□ -0.52
CDHR3-214ENST00000496633 ARHGEF12Q9NZN5 1544 aa11.8□□□□□ -0.52
CDHR3-214ENST00000496633 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
CDHR3-214ENST00000496633 ESF1Q9H501 851 aaKnown RBP11.79□□□□□ -0.52
CDHR3-214ENST00000496633 AGLP35573 1532 aa11.79□□□□□ -0.52
CDHR3-214ENST00000496633 CCDC141Q6ZP82 1450 aa11.78□□□□□ -0.52
CDHR3-214ENST00000496633 ATP7AQ04656 1500 aa11.78□□□□□ -0.52
CDHR3-214ENST00000496633 ARHGEF5Q12774 1597 aa11.78□□□□□ -0.52
CDHR3-214ENST00000496633 DIP2CQ9Y2E4 1556 aa11.78□□□□□ -0.52
CDHR3-214ENST00000496633 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.52
CDHR3-214ENST00000496633 PPP6R1Q9UPN7 881 aa11.77□□□□□ -0.53
CDHR3-214ENST00000496633 KIDINS220Q9ULH0 1771 aa11.77□□□□□ -0.53
CDHR3-214ENST00000496633 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
CDHR3-214ENST00000496633 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
CDHR3-214ENST00000496633 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
CDHR3-214ENST00000496633 ABCA6Q8N139 1617 aa11.75□□□□□ -0.53
CDHR3-214ENST00000496633 ADGBQ8N7X0 1667 aa11.75□□□□□ -0.53
CDHR3-214ENST00000496633 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
CDHR3-214ENST00000496633 PTPRMP28827 1452 aa11.75□□□□□ -0.53
CDHR3-214ENST00000496633 A2MP01023 1474 aa11.74□□□□□ -0.53
CDHR3-214ENST00000496633 MADDQ8WXG6 1647 aa11.73□□□□□ -0.53
CDHR3-214ENST00000496633 ZNF644Q9H582 1327 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-214ENST00000496633 FER1L4A9Z1Z3 1794 aa11.72□□□□□ -0.53
CDHR3-214ENST00000496633 FAM135AQ9P2D6 1515 aa11.71□□□□□ -0.53
CDHR3-214ENST00000496633 DHX29Q7Z478 1369 aaKnown RBP11.71□□□□□ -0.53
CDHR3-214ENST00000496633 MLECQ14165 292 aa11.71□□□□□ -0.53
CDHR3-214ENST00000496633 MAST1Q9Y2H9 1570 aa11.71□□□□□ -0.54
CDHR3-214ENST00000496633 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
CDHR3-214ENST00000496633 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
CDHR3-214ENST00000496633 PLXNC1O60486 1568 aa11.7□□□□□ -0.54
CDHR3-214ENST00000496633 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
CDHR3-214ENST00000496633 PTPN23Q9H3S7 1636 aa11.69□□□□□ -0.54
CDHR3-214ENST00000496633 TCOF1Q13428 1488 aaKnown RBP11.69□□□□□ -0.54
CDHR3-214ENST00000496633 MROH2AA6NES4 1674 aa11.67□□□□□ -0.54
CDHR3-214ENST00000496633 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
CDHR3-214ENST00000496633 SIGLEC1Q9BZZ2 1709 aa11.66□□□□□ -0.54
CDHR3-214ENST00000496633 ANKRD30AQ9BXX3 1397 aa11.65□□□□□ -0.55
CDHR3-214ENST00000496633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.65□□□□□ -0.55
CDHR3-214ENST00000496633 DUOX2Q9NRD8 1548 aa11.65□□□□□ -0.55
CDHR3-214ENST00000496633 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
CDHR3-214ENST00000496633 EIF2AK4Q9P2K8 1649 aaKnown RBP11.64□□□□□ -0.55
CDHR3-214ENST00000496633 NPATQ14207 1427 aa11.64□□□□□ -0.55
CDHR3-214ENST00000496633 GGT6Q6P531 493 aa11.64□□□□□ -0.55
CDHR3-214ENST00000496633 DAPK1P53355 1430 aa11.63□□□□□ -0.55
CDHR3-214ENST00000496633 CROCC2H7BZ55 1655 aa11.63□□□□□ -0.55
CDHR3-214ENST00000496633 KIF3BO15066 747 aa11.63□□□□□ -0.55
CDHR3-214ENST00000496633 ABCC5O15440 1437 aa11.62□□□□□ -0.55
CDHR3-214ENST00000496633 ERBINQ96RT1 1412 aa11.62□□□□□ -0.55
CDHR3-214ENST00000496633 FAM50AQ14320 339 aaKnown RBP11.62□□□□□ -0.55
CDHR3-214ENST00000496633 UHRF1BP1Q6BDS2 1440 aa11.61□□□□□ -0.55
CDHR3-214ENST00000496633 ZMYM3Q14202 1370 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms