RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 KDM4FA0A1W2PPD8 638 aa25.74■■□□□ 1.71
DNMT3A-215ENST00000496570 EFCAB2Q5VUJ9 269 aa25.74■■□□□ 1.71
DNMT3A-215ENST00000496570 SCAPERQ9BY12 1400 aa25.72■■□□□ 1.71
DNMT3A-215ENST00000496570 TIAM1Q13009 1591 aa25.72■■□□□ 1.71
DNMT3A-215ENST00000496570 EHBP1L1Q8N3D4 1523 aa25.72■■□□□ 1.71
DNMT3A-215ENST00000496570 MTUS2Q5JR59 1369 aa25.71■■□□□ 1.71
DNMT3A-215ENST00000496570 ZMYM4Q5VZL5 1548 aa25.71■■□□□ 1.71
DNMT3A-215ENST00000496570 POGZQ7Z3K3 1410 aa25.71■■□□□ 1.71
DNMT3A-215ENST00000496570 GPATCH8Q9UKJ3 1502 aaKnown RBP25.7■■□□□ 1.7
DNMT3A-215ENST00000496570 ARHGEF12Q9NZN5 1544 aa25.66■■□□□ 1.7
DNMT3A-215ENST00000496570 ABCC1P33527 1531 aa25.65■■□□□ 1.7
DNMT3A-215ENST00000496570 ARHGEF40Q8TER5 1519 aa25.65■■□□□ 1.7
DNMT3A-215ENST00000496570 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
DNMT3A-215ENST00000496570 SAMD9LQ8IVG5 1584 aa25.62■■□□□ 1.69
DNMT3A-215ENST00000496570 YEATS2Q9ULM3 1422 aa25.62■■□□□ 1.69
DNMT3A-215ENST00000496570 KDM5CP41229 1560 aa25.61■■□□□ 1.69
DNMT3A-215ENST00000496570 ITSN2Q9NZM3 1697 aa25.61■■□□□ 1.69
DNMT3A-215ENST00000496570 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
DNMT3A-215ENST00000496570 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
DNMT3A-215ENST00000496570 MAGI2Q86UL8 1455 aa25.6■■□□□ 1.69
DNMT3A-215ENST00000496570 ZFYVE16Q7Z3T8 1539 aa25.59■■□□□ 1.69
DNMT3A-215ENST00000496570 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
DNMT3A-215ENST00000496570 ZNF518AQ6AHZ1 1483 aa25.59■■□□□ 1.69
DNMT3A-215ENST00000496570 TRAPPC8Q9Y2L5 1435 aa25.58■■□□□ 1.69
DNMT3A-215ENST00000496570 NCOA2Q15596 1464 aa25.58■■□□□ 1.69
DNMT3A-215ENST00000496570 SUPT6HQ7KZ85 1726 aaKnown RBP25.57■■□□□ 1.68
DNMT3A-215ENST00000496570 SIGLEC1Q9BZZ2 1709 aa25.57■■□□□ 1.68
DNMT3A-215ENST00000496570 AFAP1Q8N556 730 aa25.57■■□□□ 1.68
DNMT3A-215ENST00000496570 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
DNMT3A-215ENST00000496570 CFDP1Q9UEE9 299 aaPredicted RBP25.53■■□□□ 1.68
DNMT3A-215ENST00000496570 SYCP2Q9BX26 1530 aa25.53■■□□□ 1.68
DNMT3A-215ENST00000496570 ZNF777Q9ULD5 760 aaPredicted RBP25.52■■□□□ 1.68
DNMT3A-215ENST00000496570 HECW2Q9P2P5 1572 aa25.5■■□□□ 1.67
DNMT3A-215ENST00000496570 KIAA1107Q9UPP5 1409 aa25.5■■□□□ 1.67
DNMT3A-215ENST00000496570 MLH3Q9UHC1 1453 aa25.49■■□□□ 1.67
DNMT3A-215ENST00000496570 ADAMTSL3P82987 1691 aa25.48■■□□□ 1.67
DNMT3A-215ENST00000496570 ZNF644Q9H582 1327 aaPredicted RBP25.48■■□□□ 1.67
DNMT3A-215ENST00000496570 BCORL1Q5H9F3 1711 aa25.48■■□□□ 1.67
DNMT3A-215ENST00000496570 DIP2CQ9Y2E4 1556 aa25.47■■□□□ 1.67
DNMT3A-215ENST00000496570 ATP10AO60312 1499 aa25.47■■□□□ 1.67
DNMT3A-215ENST00000496570 PLEKHH2Q8IVE3 1493 aa25.47■■□□□ 1.67
DNMT3A-215ENST00000496570 HNRNPMP52272 730 aaKnown RBP eCLIP25.46■■□□□ 1.67
DNMT3A-215ENST00000496570 ABCA6Q8N139 1617 aa25.45■■□□□ 1.67
DNMT3A-215ENST00000496570 KIDINS220Q9ULH0 1771 aa25.45■■□□□ 1.66
DNMT3A-215ENST00000496570 MBD5Q9P267 1494 aa25.44■■□□□ 1.66
DNMT3A-215ENST00000496570 C9orf84Q5VXU9 1444 aa25.43■■□□□ 1.66
DNMT3A-215ENST00000496570 REREQ9P2R6 1566 aa25.39■■□□□ 1.66
DNMT3A-215ENST00000496570 ARID4BQ4LE39 1312 aaPredicted RBP25.39■■□□□ 1.66
DNMT3A-215ENST00000496570 CAMSAP2Q08AD1 1489 aa25.39■■□□□ 1.65
DNMT3A-215ENST00000496570 INO80Q9ULG1 1556 aaPredicted RBP25.38■■□□□ 1.65
DNMT3A-215ENST00000496570 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
DNMT3A-215ENST00000496570 ATP7AQ04656 1500 aa25.35■■□□□ 1.65
DNMT3A-215ENST00000496570 MYOM3Q5VTT5 1437 aa25.35■■□□□ 1.65
DNMT3A-215ENST00000496570 APLP2Q06481 763 aa25.34■■□□□ 1.65
DNMT3A-215ENST00000496570 SPAG9O60271 1321 aaKnown RBP25.34■■□□□ 1.65
DNMT3A-215ENST00000496570 PTPRMP28827 1452 aa25.32■■□□□ 1.64
DNMT3A-215ENST00000496570 MYT1LQ9UL68 1186 aa25.31■■□□□ 1.64
DNMT3A-215ENST00000496570 MIA2Q96PC5 1412 aa25.3■■□□□ 1.64
DNMT3A-215ENST00000496570 AGLP35573 1532 aa25.3■■□□□ 1.64
DNMT3A-215ENST00000496570 ARHGEF5Q12774 1597 aa25.29■■□□□ 1.64
DNMT3A-215ENST00000496570 CCDC141Q6ZP82 1450 aa25.28■■□□□ 1.64
DNMT3A-215ENST00000496570 RIMS1Q86UR5 1692 aaKnown RBP25.28■■□□□ 1.64
DNMT3A-215ENST00000496570 MLECQ14165 292 aa25.26■■□□□ 1.63
DNMT3A-215ENST00000496570 RTEL1-TNFRSF6BF6WH68 1400 aa25.26■■□□□ 1.63
DNMT3A-215ENST00000496570 PLXNC1O60486 1568 aa25.26■■□□□ 1.63
DNMT3A-215ENST00000496570 FER1L4A9Z1Z3 1794 aa25.24■■□□□ 1.63
DNMT3A-215ENST00000496570 ADGBQ8N7X0 1667 aa25.21■■□□□ 1.63
DNMT3A-215ENST00000496570 RSPH4AQ5TD94 716 aa25.21■■□□□ 1.63
DNMT3A-215ENST00000496570 A2MP01023 1474 aa25.21■■□□□ 1.63
DNMT3A-215ENST00000496570 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.62
DNMT3A-215ENST00000496570 FGD6Q6ZV73 1430 aa25.2■■□□□ 1.62
DNMT3A-215ENST00000496570 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
DNMT3A-215ENST00000496570 MAST1Q9Y2H9 1570 aa25.17■■□□□ 1.62
DNMT3A-215ENST00000496570 DHX29Q7Z478 1369 aaKnown RBP25.12■■□□□ 1.61
DNMT3A-215ENST00000496570 ABCC5O15440 1437 aa25.12■■□□□ 1.61
DNMT3A-215ENST00000496570 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
DNMT3A-215ENST00000496570 TSPY4P0CV99 314 aa25.1■■□□□ 1.61
DNMT3A-215ENST00000496570 TSPY10P0CW01 314 aa25.1■■□□□ 1.61
DNMT3A-215ENST00000496570 DNMT1P26358 1616 aaKnown RBP25.09■■□□□ 1.61
DNMT3A-215ENST00000496570 SHANK2Q9UPX8 1470 aa25.07■■□□□ 1.6
DNMT3A-215ENST00000496570 DAPK1P53355 1430 aa25.06■■□□□ 1.6
DNMT3A-215ENST00000496570 C3P01024 1663 aa25.05■■□□□ 1.6
DNMT3A-215ENST00000496570 CEBPAP49715 358 aaPredicted RBP25.05■■□□□ 1.6
DNMT3A-215ENST00000496570 PLPPR3Q6T4P5 718 aa25.03■■□□□ 1.6
DNMT3A-215ENST00000496570 LMTK3Q96Q04 1460 aa25.02■■□□□ 1.6
DNMT3A-215ENST00000496570 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
DNMT3A-215ENST00000496570 CNTLNQ9NXG0 1405 aa25.02■■□□□ 1.6
DNMT3A-215ENST00000496570 MROH2AA6NES4 1674 aa25.01■■□□□ 1.59
DNMT3A-215ENST00000496570 CLTCQ00610 1675 aaKnown RBP25■■□□□ 1.59
DNMT3A-215ENST00000496570 GGT6Q6P531 493 aa24.99■■□□□ 1.59
DNMT3A-215ENST00000496570 KIF3BO15066 747 aa24.97■■□□□ 1.59
DNMT3A-215ENST00000496570 DUOX2Q9NRD8 1548 aa24.96■■□□□ 1.59
DNMT3A-215ENST00000496570 RNF17Q9BXT8 1623 aaKnown RBP24.95■■□□□ 1.58
DNMT3A-215ENST00000496570 EIF2AK4Q9P2K8 1649 aaKnown RBP24.95■■□□□ 1.58
DNMT3A-215ENST00000496570 PPP6R1Q9UPN7 881 aa24.95■■□□□ 1.58
DNMT3A-215ENST00000496570 ZMYM3Q14202 1370 aa24.94■■□□□ 1.58
DNMT3A-215ENST00000496570 ESF1Q9H501 851 aaKnown RBP24.94■■□□□ 1.58
DNMT3A-215ENST00000496570 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
DNMT3A-215ENST00000496570 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
DNMT3A-215ENST00000496570 PREX1Q8TCU6 1659 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms