RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 ZFYVE16Q7Z3T8 1539 aa21.1■□□□□ 0.97
FN1-226ENST00000496542 POGZQ7Z3K3 1410 aa21.1■□□□□ 0.97
FN1-226ENST00000496542 PTPRMP28827 1452 aa21.08■□□□□ 0.97
FN1-226ENST00000496542 CCDC18Q5T9S5 1454 aa21.08■□□□□ 0.97
FN1-226ENST00000496542 MADDQ8WXG6 1647 aa21.08■□□□□ 0.97
FN1-226ENST00000496542 EFCAB2Q5VUJ9 269 aa21.08■□□□□ 0.97
FN1-226ENST00000496542 YEATS2Q9ULM3 1422 aa21.07■□□□□ 0.96
FN1-226ENST00000496542 ARHGAP5Q13017 1502 aa21.07■□□□□ 0.96
FN1-226ENST00000496542 MAGI2Q86UL8 1455 aa21.06■□□□□ 0.96
FN1-226ENST00000496542 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
FN1-226ENST00000496542 RIMS1Q86UR5 1692 aaKnown RBP21.03■□□□□ 0.96
FN1-226ENST00000496542 SIGLEC1Q9BZZ2 1709 aa21.03■□□□□ 0.96
FN1-226ENST00000496542 CDC42BPBQ9Y5S2 1711 aa21.01■□□□□ 0.95
FN1-226ENST00000496542 PREX2Q70Z35 1606 aa21■□□□□ 0.95
FN1-226ENST00000496542 ZNF518AQ6AHZ1 1483 aa20.99■□□□□ 0.95
FN1-226ENST00000496542 ATP10AO60312 1499 aa20.95■□□□□ 0.94
FN1-226ENST00000496542 KDM5CP41229 1560 aa20.95■□□□□ 0.94
FN1-226ENST00000496542 MLECQ14165 292 aa20.95■□□□□ 0.94
FN1-226ENST00000496542 C9orf84Q5VXU9 1444 aa20.95■□□□□ 0.94
FN1-226ENST00000496542 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
FN1-226ENST00000496542 CDC42BPAQ5VT25 1732 aa20.94■□□□□ 0.94
FN1-226ENST00000496542 FER1L4A9Z1Z3 1794 aa20.94■□□□□ 0.94
FN1-226ENST00000496542 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
FN1-226ENST00000496542 ABCC1P33527 1531 aa20.93■□□□□ 0.94
FN1-226ENST00000496542 MYT1LQ9UL68 1186 aa20.92■□□□□ 0.94
FN1-226ENST00000496542 ITSN2Q9NZM3 1697 aa20.91■□□□□ 0.94
FN1-226ENST00000496542 DIP2CQ9Y2E4 1556 aa20.89■□□□□ 0.93
FN1-226ENST00000496542 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
FN1-226ENST00000496542 TRAPPC8Q9Y2L5 1435 aa20.88■□□□□ 0.93
FN1-226ENST00000496542 ABCA6Q8N139 1617 aa20.87■□□□□ 0.93
FN1-226ENST00000496542 LMTK3Q96Q04 1460 aa20.87■□□□□ 0.93
FN1-226ENST00000496542 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
FN1-226ENST00000496542 ZNF777Q9ULD5 760 aaPredicted RBP20.85■□□□□ 0.93
FN1-226ENST00000496542 MLH3Q9UHC1 1453 aa20.85■□□□□ 0.93
FN1-226ENST00000496542 SAMD9LQ8IVG5 1584 aa20.84■□□□□ 0.93
FN1-226ENST00000496542 MTUS2Q5JR59 1369 aa20.84■□□□□ 0.93
FN1-226ENST00000496542 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.93
FN1-226ENST00000496542 ILDR1Q86SU0 546 aaPredicted RBP20.83■□□□□ 0.93
FN1-226ENST00000496542 SYCP2Q9BX26 1530 aa20.82■□□□□ 0.92
FN1-226ENST00000496542 REREQ9P2R6 1566 aa20.81■□□□□ 0.92
FN1-226ENST00000496542 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
FN1-226ENST00000496542 KIDINS220Q9ULH0 1771 aa20.8■□□□□ 0.92
FN1-226ENST00000496542 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
FN1-226ENST00000496542 HSPA2P54652 639 aa20.77■□□□□ 0.92
FN1-226ENST00000496542 CFDP1Q9UEE9 299 aaPredicted RBP20.77■□□□□ 0.92
FN1-226ENST00000496542 AGLP35573 1532 aa20.75■□□□□ 0.91
FN1-226ENST00000496542 HNRNPMP52272 730 aaKnown RBP eCLIP20.75■□□□□ 0.91
FN1-226ENST00000496542 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
FN1-226ENST00000496542 CEBPAP49715 358 aaPredicted RBP20.74■□□□□ 0.91
FN1-226ENST00000496542 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
FN1-226ENST00000496542 SPAG9O60271 1321 aaKnown RBP20.73■□□□□ 0.91
FN1-226ENST00000496542 KIAA1107Q9UPP5 1409 aa20.72■□□□□ 0.91
FN1-226ENST00000496542 PREX1Q8TCU6 1659 aa20.72■□□□□ 0.91
FN1-226ENST00000496542 ATP7AQ04656 1500 aa20.71■□□□□ 0.91
FN1-226ENST00000496542 INO80Q9ULG1 1556 aaPredicted RBP20.69■□□□□ 0.9
FN1-226ENST00000496542 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
FN1-226ENST00000496542 ESF1Q9H501 851 aaKnown RBP20.69■□□□□ 0.9
FN1-226ENST00000496542 C3P01024 1663 aa20.67■□□□□ 0.9
FN1-226ENST00000496542 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
FN1-226ENST00000496542 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
FN1-226ENST00000496542 ZNF644Q9H582 1327 aaPredicted RBP20.66■□□□□ 0.9
FN1-226ENST00000496542 NCOA2Q15596 1464 aa20.63■□□□□ 0.89
FN1-226ENST00000496542 UHRF1BP1Q6BDS2 1440 aa20.63■□□□□ 0.89
FN1-226ENST00000496542 VPS8Q8N3P4 1428 aa20.63■□□□□ 0.89
FN1-226ENST00000496542 A2MP01023 1474 aa20.62■□□□□ 0.89
FN1-226ENST00000496542 CNTLNQ9NXG0 1405 aa20.62■□□□□ 0.89
FN1-226ENST00000496542 PLXNC1O60486 1568 aa20.62■□□□□ 0.89
FN1-226ENST00000496542 MBD5Q9P267 1494 aa20.61■□□□□ 0.89
FN1-226ENST00000496542 ADGBQ8N7X0 1667 aa20.6■□□□□ 0.89
FN1-226ENST00000496542 MROH2AA6NES4 1674 aa20.58■□□□□ 0.89
FN1-226ENST00000496542 CAMSAP2Q08AD1 1489 aa20.58■□□□□ 0.89
FN1-226ENST00000496542 FBXO41Q8TF61 875 aa20.57■□□□□ 0.88
FN1-226ENST00000496542 CLTCQ00610 1675 aaKnown RBP20.56■□□□□ 0.88
FN1-226ENST00000496542 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
FN1-226ENST00000496542 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
FN1-226ENST00000496542 STRCQ7RTU9 1775 aa20.54■□□□□ 0.88
FN1-226ENST00000496542 RTEL1-TNFRSF6BF6WH68 1400 aa20.53■□□□□ 0.88
FN1-226ENST00000496542 GGT6Q6P531 493 aa20.53■□□□□ 0.88
FN1-226ENST00000496542 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
FN1-226ENST00000496542 NPATQ14207 1427 aa20.51■□□□□ 0.87
FN1-226ENST00000496542 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
FN1-226ENST00000496542 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
FN1-226ENST00000496542 ARHGEF5Q12774 1597 aa20.48■□□□□ 0.87
FN1-226ENST00000496542 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
FN1-226ENST00000496542 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
FN1-226ENST00000496542 RSPH4AQ5TD94 716 aa20.46■□□□□ 0.87
FN1-226ENST00000496542 CERKQ8TCT0 537 aa20.44■□□□□ 0.86
FN1-226ENST00000496542 MYO3AQ8NEV4 1616 aa20.44■□□□□ 0.86
FN1-226ENST00000496542 PTPRKQ15262 1439 aa20.44■□□□□ 0.86
FN1-226ENST00000496542 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
FN1-226ENST00000496542 NCOA1Q15788 1441 aa20.43■□□□□ 0.86
FN1-226ENST00000496542 KIF3BO15066 747 aa20.42■□□□□ 0.86
FN1-226ENST00000496542 TSPY4P0CV99 314 aa20.42■□□□□ 0.86
FN1-226ENST00000496542 TSPY10P0CW01 314 aa20.42■□□□□ 0.86
FN1-226ENST00000496542 MYOM3Q5VTT5 1437 aa20.42■□□□□ 0.86
FN1-226ENST00000496542 CAMSAP1Q5T5Y3 1602 aa20.42■□□□□ 0.86
FN1-226ENST00000496542 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
FN1-226ENST00000496542 PTPRTO14522 1441 aa20.41■□□□□ 0.86
FN1-226ENST00000496542 CEP170BQ9Y4F5 1589 aaPredicted RBP20.39■□□□□ 0.85
FN1-226ENST00000496542 KDM5DQ9BY66 1539 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms