RNA–Protein interactions for RNA: ENST00000496372.1

CNIH3-212, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 2

Gene CNIH3, Length 451 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-212ENST00000496372 PHLDB1Q86UU1 1377 aa12.33□□□□□ -0.44
CNIH3-212ENST00000496372 ITSN2Q9NZM3 1697 aa12.33□□□□□ -0.44
CNIH3-212ENST00000496372 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
CNIH3-212ENST00000496372 COL17A1Q9UMD9 1497 aaPredicted RBP12.33□□□□□ -0.44
CNIH3-212ENST00000496372 CCNB3Q8WWL7 1395 aa12.32□□□□□ -0.44
CNIH3-212ENST00000496372 AKNAQ7Z591 1439 aa12.32□□□□□ -0.44
CNIH3-212ENST00000496372 EFCAB2Q5VUJ9 269 aa12.32□□□□□ -0.44
CNIH3-212ENST00000496372 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
CNIH3-212ENST00000496372 RICTORQ6R327 1708 aa12.29□□□□□ -0.44
CNIH3-212ENST00000496372 ADGRL1O94910 1474 aa12.28□□□□□ -0.44
CNIH3-212ENST00000496372 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.44
CNIH3-212ENST00000496372 SAMD9LQ8IVG5 1584 aa12.27□□□□□ -0.44
CNIH3-212ENST00000496372 CFDP1Q9UEE9 299 aaPredicted RBP12.27□□□□□ -0.45
CNIH3-212ENST00000496372 SCAPERQ9BY12 1400 aa12.27□□□□□ -0.45
CNIH3-212ENST00000496372 DENND4BO75064 1496 aaPredicted RBP12.27□□□□□ -0.45
CNIH3-212ENST00000496372 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
CNIH3-212ENST00000496372 ZNF777Q9ULD5 760 aaPredicted RBP12.26□□□□□ -0.45
CNIH3-212ENST00000496372 ABCC1P33527 1531 aa12.26□□□□□ -0.45
CNIH3-212ENST00000496372 SYCP2Q9BX26 1530 aa12.23□□□□□ -0.45
CNIH3-212ENST00000496372 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
CNIH3-212ENST00000496372 POGZQ7Z3K3 1410 aa12.23□□□□□ -0.45
CNIH3-212ENST00000496372 ARHGEF12Q9NZN5 1544 aa12.22□□□□□ -0.45
CNIH3-212ENST00000496372 PLEKHH2Q8IVE3 1493 aa12.22□□□□□ -0.45
CNIH3-212ENST00000496372 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
CNIH3-212ENST00000496372 ZMYM4Q5VZL5 1548 aa12.21□□□□□ -0.45
CNIH3-212ENST00000496372 ZNF518AQ6AHZ1 1483 aa12.21□□□□□ -0.45
CNIH3-212ENST00000496372 ZNF644Q9H582 1327 aaPredicted RBP12.21□□□□□ -0.45
CNIH3-212ENST00000496372 CAMSAP2Q08AD1 1489 aa12.21□□□□□ -0.46
CNIH3-212ENST00000496372 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
CNIH3-212ENST00000496372 HNRNPMP52272 730 aaKnown RBP eCLIP12.2□□□□□ -0.46
CNIH3-212ENST00000496372 KDM5CP41229 1560 aa12.2□□□□□ -0.46
CNIH3-212ENST00000496372 MIA2Q96PC5 1412 aa12.2□□□□□ -0.46
CNIH3-212ENST00000496372 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
CNIH3-212ENST00000496372 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
CNIH3-212ENST00000496372 AFAP1Q8N556 730 aa12.19□□□□□ -0.46
CNIH3-212ENST00000496372 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
CNIH3-212ENST00000496372 ZFYVE16Q7Z3T8 1539 aa12.17□□□□□ -0.46
CNIH3-212ENST00000496372 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
CNIH3-212ENST00000496372 MAGI2Q86UL8 1455 aa12.17□□□□□ -0.46
CNIH3-212ENST00000496372 MBD5Q9P267 1494 aa12.17□□□□□ -0.46
CNIH3-212ENST00000496372 FGD6Q6ZV73 1430 aa12.17□□□□□ -0.46
CNIH3-212ENST00000496372 ARHGEF5Q12774 1597 aa12.17□□□□□ -0.46
CNIH3-212ENST00000496372 KIDINS220Q9ULH0 1771 aa12.16□□□□□ -0.46
CNIH3-212ENST00000496372 YEATS2Q9ULM3 1422 aa12.15□□□□□ -0.46
CNIH3-212ENST00000496372 ABCA6Q8N139 1617 aa12.15□□□□□ -0.47
CNIH3-212ENST00000496372 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
CNIH3-212ENST00000496372 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
CNIH3-212ENST00000496372 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
CNIH3-212ENST00000496372 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
CNIH3-212ENST00000496372 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
CNIH3-212ENST00000496372 SPAG9O60271 1321 aaKnown RBP12.13□□□□□ -0.47
CNIH3-212ENST00000496372 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
CNIH3-212ENST00000496372 ATP7AQ04656 1500 aa12.13□□□□□ -0.47
CNIH3-212ENST00000496372 DIP2CQ9Y2E4 1556 aa12.13□□□□□ -0.47
CNIH3-212ENST00000496372 RSPH4AQ5TD94 716 aa12.12□□□□□ -0.47
CNIH3-212ENST00000496372 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
CNIH3-212ENST00000496372 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
CNIH3-212ENST00000496372 ATP10AO60312 1499 aa12.11□□□□□ -0.47
CNIH3-212ENST00000496372 FAM50AQ14320 339 aaKnown RBP12.11□□□□□ -0.47
CNIH3-212ENST00000496372 ADGBQ8N7X0 1667 aa12.1□□□□□ -0.47
CNIH3-212ENST00000496372 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
CNIH3-212ENST00000496372 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
CNIH3-212ENST00000496372 C9orf84Q5VXU9 1444 aa12.09□□□□□ -0.47
CNIH3-212ENST00000496372 REREQ9P2R6 1566 aa12.09□□□□□ -0.47
CNIH3-212ENST00000496372 TSPY4P0CV99 314 aa12.08□□□□□ -0.48
CNIH3-212ENST00000496372 TSPY10P0CW01 314 aa12.08□□□□□ -0.48
CNIH3-212ENST00000496372 ABCC5O15440 1437 aa12.08□□□□□ -0.48
CNIH3-212ENST00000496372 DAPK1P53355 1430 aa12.08□□□□□ -0.48
CNIH3-212ENST00000496372 BCORL1Q5H9F3 1711 aa12.07□□□□□ -0.48
CNIH3-212ENST00000496372 SHANK2Q9UPX8 1470 aa12.07□□□□□ -0.48
CNIH3-212ENST00000496372 ARID4BQ4LE39 1312 aaPredicted RBP12.07□□□□□ -0.48
CNIH3-212ENST00000496372 PLXNC1O60486 1568 aa12.05□□□□□ -0.48
CNIH3-212ENST00000496372 RRBP1Q9P2E9 1410 aaKnown RBP12.05□□□□□ -0.48
CNIH3-212ENST00000496372 A2MP01023 1474 aa12.04□□□□□ -0.48
CNIH3-212ENST00000496372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.04□□□□□ -0.48
CNIH3-212ENST00000496372 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
CNIH3-212ENST00000496372 AGLP35573 1532 aa12.03□□□□□ -0.48
CNIH3-212ENST00000496372 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.49
CNIH3-212ENST00000496372 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
CNIH3-212ENST00000496372 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.49
CNIH3-212ENST00000496372 MADDQ8WXG6 1647 aa12.01□□□□□ -0.49
CNIH3-212ENST00000496372 MLECQ14165 292 aa12.01□□□□□ -0.49
CNIH3-212ENST00000496372 DHX29Q7Z478 1369 aaKnown RBP12.01□□□□□ -0.49
CNIH3-212ENST00000496372 ITGAEP38570 1179 aa12□□□□□ -0.49
CNIH3-212ENST00000496372 PTPRKQ15262 1439 aa12□□□□□ -0.49
CNIH3-212ENST00000496372 ADGRL2O95490 1459 aa12□□□□□ -0.49
CNIH3-212ENST00000496372 DUOX2Q9NRD8 1548 aa12□□□□□ -0.49
CNIH3-212ENST00000496372 RIMS1Q86UR5 1692 aaKnown RBP12□□□□□ -0.49
CNIH3-212ENST00000496372 RRP7BPQ9NSQ0 103 aa11.99□□□□□ -0.49
CNIH3-212ENST00000496372 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
CNIH3-212ENST00000496372 KIF15Q9NS87 1388 aa11.99□□□□□ -0.49
CNIH3-212ENST00000496372 NCOA1Q15788 1441 aa11.99□□□□□ -0.49
CNIH3-212ENST00000496372 EIF2AK4Q9P2K8 1649 aaKnown RBP11.98□□□□□ -0.49
CNIH3-212ENST00000496372 KIF3BO15066 747 aa11.96□□□□□ -0.49
CNIH3-212ENST00000496372 RNF17Q9BXT8 1623 aaKnown RBP11.96□□□□□ -0.5
CNIH3-212ENST00000496372 ROCK1Q13464 1354 aa11.95□□□□□ -0.5
CNIH3-212ENST00000496372 CLTCQ00610 1675 aaKnown RBP11.95□□□□□ -0.5
CNIH3-212ENST00000496372 ERBINQ96RT1 1412 aa11.94□□□□□ -0.5
CNIH3-212ENST00000496372 GGT6Q6P531 493 aa11.94□□□□□ -0.5
CNIH3-212ENST00000496372 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms