RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 ADGRL1O94910 1474 aa29.1■■■□□ 2.25
COPS6-210ENST00000496358 FRMPD1Q5SYB0 1578 aa29.1■■■□□ 2.25
COPS6-210ENST00000496358 RICTORQ6R327 1708 aa29.1■■■□□ 2.25
COPS6-210ENST00000496358 PREX2Q70Z35 1606 aa29.09■■■□□ 2.25
COPS6-210ENST00000496358 CDC42BPAQ5VT25 1732 aa29.08■■■□□ 2.25
COPS6-210ENST00000496358 SCAPERQ9BY12 1400 aa29.07■■■□□ 2.24
COPS6-210ENST00000496358 EHBP1L1Q8N3D4 1523 aa29.05■■■□□ 2.24
COPS6-210ENST00000496358 TIAM1Q13009 1591 aa29.03■■■□□ 2.24
COPS6-210ENST00000496358 CCNB3Q8WWL7 1395 aa29■■■□□ 2.23
COPS6-210ENST00000496358 POGZQ7Z3K3 1410 aa28.99■■■□□ 2.23
COPS6-210ENST00000496358 GPATCH8Q9UKJ3 1502 aaKnown RBP28.99■■■□□ 2.23
COPS6-210ENST00000496358 ZMYM4Q5VZL5 1548 aa28.96■■■□□ 2.23
COPS6-210ENST00000496358 ZNF777Q9ULD5 760 aaPredicted RBP28.95■■■□□ 2.22
COPS6-210ENST00000496358 SUPT6HQ7KZ85 1726 aaKnown RBP28.94■■■□□ 2.22
COPS6-210ENST00000496358 CFDP1Q9UEE9 299 aaPredicted RBP28.93■■■□□ 2.22
COPS6-210ENST00000496358 ARHGEF40Q8TER5 1519 aa28.92■■■□□ 2.22
COPS6-210ENST00000496358 ZNF518AQ6AHZ1 1483 aa28.91■■■□□ 2.22
COPS6-210ENST00000496358 MAGI2Q86UL8 1455 aa28.91■■■□□ 2.22
COPS6-210ENST00000496358 ABCC1P33527 1531 aa28.91■■■□□ 2.22
COPS6-210ENST00000496358 MAP3K1Q13233 1512 aa28.91■■■□□ 2.22
COPS6-210ENST00000496358 ZFYVE16Q7Z3T8 1539 aa28.9■■■□□ 2.22
COPS6-210ENST00000496358 ITSN2Q9NZM3 1697 aa28.9■■■□□ 2.22
COPS6-210ENST00000496358 LRRC9Q6ZRR7 1453 aa28.9■■■□□ 2.22
COPS6-210ENST00000496358 APLP2Q06481 763 aa28.89■■■□□ 2.22
COPS6-210ENST00000496358 AFAP1Q8N556 730 aa28.89■■■□□ 2.22
COPS6-210ENST00000496358 SAMD9LQ8IVG5 1584 aa28.88■■■□□ 2.21
COPS6-210ENST00000496358 NCOA2Q15596 1464 aa28.87■■■□□ 2.21
COPS6-210ENST00000496358 ARHGEF12Q9NZN5 1544 aa28.87■■■□□ 2.21
COPS6-210ENST00000496358 YEATS2Q9ULM3 1422 aa28.86■■■□□ 2.21
COPS6-210ENST00000496358 MYT1LQ9UL68 1186 aa28.85■■■□□ 2.21
COPS6-210ENST00000496358 ARID4BQ4LE39 1312 aaPredicted RBP28.85■■■□□ 2.21
COPS6-210ENST00000496358 KDM5CP41229 1560 aa28.84■■■□□ 2.21
COPS6-210ENST00000496358 KANK4Q5T7N3 995 aaPredicted RBP28.84■■■□□ 2.21
COPS6-210ENST00000496358 TRAPPC8Q9Y2L5 1435 aa28.84■■■□□ 2.21
COPS6-210ENST00000496358 SYCP2Q9BX26 1530 aa28.81■■■□□ 2.2
COPS6-210ENST00000496358 PLEKHH2Q8IVE3 1493 aa28.81■■■□□ 2.2
COPS6-210ENST00000496358 HECW2Q9P2P5 1572 aa28.8■■■□□ 2.2
COPS6-210ENST00000496358 HNRNPMP52272 730 aaKnown RBP eCLIP28.8■■■□□ 2.2
COPS6-210ENST00000496358 KIAA1107Q9UPP5 1409 aa28.77■■■□□ 2.2
COPS6-210ENST00000496358 ATP10AO60312 1499 aa28.77■■■□□ 2.2
COPS6-210ENST00000496358 MLH3Q9UHC1 1453 aa28.76■■■□□ 2.19
COPS6-210ENST00000496358 ZNF644Q9H582 1327 aaPredicted RBP28.75■■■□□ 2.19
COPS6-210ENST00000496358 BCORL1Q5H9F3 1711 aa28.74■■■□□ 2.19
COPS6-210ENST00000496358 SIGLEC1Q9BZZ2 1709 aa28.72■■■□□ 2.19
COPS6-210ENST00000496358 C9orf84Q5VXU9 1444 aa28.72■■■□□ 2.19
COPS6-210ENST00000496358 ADAMTSL3P82987 1691 aa28.71■■■□□ 2.19
COPS6-210ENST00000496358 KIDINS220Q9ULH0 1771 aa28.7■■■□□ 2.19
COPS6-210ENST00000496358 DIP2CQ9Y2E4 1556 aa28.7■■■□□ 2.18
COPS6-210ENST00000496358 ABCA6Q8N139 1617 aa28.69■■■□□ 2.18
COPS6-210ENST00000496358 SPAG9O60271 1321 aaKnown RBP28.69■■■□□ 2.18
COPS6-210ENST00000496358 CAMSAP2Q08AD1 1489 aa28.66■■■□□ 2.18
COPS6-210ENST00000496358 MLECQ14165 292 aa28.64■■■□□ 2.18
COPS6-210ENST00000496358 MBD5Q9P267 1494 aa28.64■■■□□ 2.17
COPS6-210ENST00000496358 MYOM3Q5VTT5 1437 aa28.63■■■□□ 2.17
COPS6-210ENST00000496358 MADDQ8WXG6 1647 aa28.63■■■□□ 2.17
COPS6-210ENST00000496358 ATP7AQ04656 1500 aa28.62■■■□□ 2.17
COPS6-210ENST00000496358 REREQ9P2R6 1566 aa28.61■■■□□ 2.17
COPS6-210ENST00000496358 INO80Q9ULG1 1556 aaPredicted RBP28.6■■■□□ 2.17
COPS6-210ENST00000496358 FBXO41Q8TF61 875 aa28.59■■■□□ 2.17
COPS6-210ENST00000496358 MIA2Q96PC5 1412 aa28.59■■■□□ 2.17
COPS6-210ENST00000496358 RSPH4AQ5TD94 716 aa28.58■■■□□ 2.17
COPS6-210ENST00000496358 RIMS1Q86UR5 1692 aaKnown RBP28.58■■■□□ 2.16
COPS6-210ENST00000496358 CCDC141Q6ZP82 1450 aa28.57■■■□□ 2.16
COPS6-210ENST00000496358 PTPRMP28827 1452 aa28.56■■■□□ 2.16
COPS6-210ENST00000496358 FER1L4A9Z1Z3 1794 aa28.55■■■□□ 2.16
COPS6-210ENST00000496358 ARHGEF5Q12774 1597 aa28.54■■■□□ 2.16
COPS6-210ENST00000496358 AGLP35573 1532 aa28.53■■■□□ 2.16
COPS6-210ENST00000496358 RTEL1-TNFRSF6BF6WH68 1400 aa28.52■■■□□ 2.16
COPS6-210ENST00000496358 TSPY4P0CV99 314 aa28.5■■■□□ 2.15
COPS6-210ENST00000496358 TSPY10P0CW01 314 aa28.5■■■□□ 2.15
COPS6-210ENST00000496358 ADGBQ8N7X0 1667 aa28.5■■■□□ 2.15
COPS6-210ENST00000496358 A2MP01023 1474 aa28.48■■■□□ 2.15
COPS6-210ENST00000496358 PTPN23Q9H3S7 1636 aa28.47■■■□□ 2.15
COPS6-210ENST00000496358 FGD6Q6ZV73 1430 aa28.45■■■□□ 2.15
COPS6-210ENST00000496358 PLPPR3Q6T4P5 718 aa28.44■■■□□ 2.14
COPS6-210ENST00000496358 PLXNC1O60486 1568 aa28.43■■■□□ 2.14
COPS6-210ENST00000496358 ESF1Q9H501 851 aaKnown RBP28.41■■■□□ 2.14
COPS6-210ENST00000496358 MAST1Q9Y2H9 1570 aa28.38■■■□□ 2.13
COPS6-210ENST00000496358 TCOF1Q13428 1488 aaKnown RBP28.38■■■□□ 2.13
COPS6-210ENST00000496358 DHX29Q7Z478 1369 aaKnown RBP28.37■■■□□ 2.13
COPS6-210ENST00000496358 PPARGC1BQ86YN6 1023 aaKnown RBP28.36■■■□□ 2.13
COPS6-210ENST00000496358 CROCC2H7BZ55 1655 aa28.33■■■□□ 2.13
COPS6-210ENST00000496358 GGT6Q6P531 493 aa28.33■■■□□ 2.13
COPS6-210ENST00000496358 DNMT1P26358 1616 aaKnown RBP28.32■■■□□ 2.12
COPS6-210ENST00000496358 CEBPAP49715 358 aaPredicted RBP28.31■■■□□ 2.12
COPS6-210ENST00000496358 ABCC5O15440 1437 aa28.31■■■□□ 2.12
COPS6-210ENST00000496358 DAPK1P53355 1430 aa28.3■■■□□ 2.12
COPS6-210ENST00000496358 FAM50AQ14320 339 aaKnown RBP28.3■■■□□ 2.12
COPS6-210ENST00000496358 CNTLNQ9NXG0 1405 aa28.29■■■□□ 2.12
COPS6-210ENST00000496358 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
COPS6-210ENST00000496358 KIF3BO15066 747 aa28.28■■■□□ 2.12
COPS6-210ENST00000496358 C3P01024 1663 aa28.27■■■□□ 2.12
COPS6-210ENST00000496358 CLTCQ00610 1675 aaKnown RBP28.26■■■□□ 2.11
COPS6-210ENST00000496358 MROH2AA6NES4 1674 aa28.24■■■□□ 2.11
COPS6-210ENST00000496358 PPP6R1Q9UPN7 881 aa28.24■■■□□ 2.11
COPS6-210ENST00000496358 CHIC2Q9UKJ5 165 aa28.22■■■□□ 2.11
COPS6-210ENST00000496358 SETD1BQ9UPS6 1966 aaKnown RBP28.2■■■□□ 2.11
COPS6-210ENST00000496358 DUOX2Q9NRD8 1548 aa28.2■■■□□ 2.1
COPS6-210ENST00000496358 RRP7BPQ9NSQ0 103 aa28.2■■■□□ 2.1
COPS6-210ENST00000496358 ZMYM3Q14202 1370 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms