RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 EHBP1L1Q8N3D4 1523 aa28.04■■■□□ 2.08
RHBDD3-207ENST00000496342 TIAM1Q13009 1591 aa28.03■■■□□ 2.08
RHBDD3-207ENST00000496342 MTUS2Q5JR59 1369 aa28.03■■■□□ 2.08
RHBDD3-207ENST00000496342 KDM4FA0A1W2PPD8 638 aa28.03■■■□□ 2.08
RHBDD3-207ENST00000496342 SCAPERQ9BY12 1400 aa28.02■■■□□ 2.08
RHBDD3-207ENST00000496342 AEBP2Q6ZN18 517 aaPredicted RBP28.01■■■□□ 2.07
RHBDD3-207ENST00000496342 ARHGEF40Q8TER5 1519 aa28.01■■■□□ 2.07
RHBDD3-207ENST00000496342 EFCAB2Q5VUJ9 269 aa28■■■□□ 2.07
RHBDD3-207ENST00000496342 ZMYM4Q5VZL5 1548 aa28■■■□□ 2.07
RHBDD3-207ENST00000496342 ITSN2Q9NZM3 1697 aa28■■■□□ 2.07
RHBDD3-207ENST00000496342 POGZQ7Z3K3 1410 aa28■■■□□ 2.07
RHBDD3-207ENST00000496342 ABCC1P33527 1531 aa27.97■■■□□ 2.07
RHBDD3-207ENST00000496342 SAMD9LQ8IVG5 1584 aa27.96■■■□□ 2.07
RHBDD3-207ENST00000496342 GPATCH8Q9UKJ3 1502 aaKnown RBP27.96■■■□□ 2.07
RHBDD3-207ENST00000496342 SIGLEC1Q9BZZ2 1709 aa27.95■■■□□ 2.07
RHBDD3-207ENST00000496342 YEATS2Q9ULM3 1422 aa27.93■■■□□ 2.06
RHBDD3-207ENST00000496342 ZFYVE16Q7Z3T8 1539 aa27.93■■■□□ 2.06
RHBDD3-207ENST00000496342 ARHGEF12Q9NZN5 1544 aa27.93■■■□□ 2.06
RHBDD3-207ENST00000496342 SUPT6HQ7KZ85 1726 aaKnown RBP27.93■■■□□ 2.06
RHBDD3-207ENST00000496342 KDM5CP41229 1560 aa27.9■■■□□ 2.06
RHBDD3-207ENST00000496342 CCNB3Q8WWL7 1395 aa27.88■■■□□ 2.05
RHBDD3-207ENST00000496342 SYCP2Q9BX26 1530 aa27.87■■■□□ 2.05
RHBDD3-207ENST00000496342 ZNF777Q9ULD5 760 aaPredicted RBP27.87■■■□□ 2.05
RHBDD3-207ENST00000496342 TRAPPC8Q9Y2L5 1435 aa27.86■■■□□ 2.05
RHBDD3-207ENST00000496342 NCOA2Q15596 1464 aa27.86■■■□□ 2.05
RHBDD3-207ENST00000496342 ZNF518AQ6AHZ1 1483 aa27.86■■■□□ 2.05
RHBDD3-207ENST00000496342 HECW2Q9P2P5 1572 aa27.86■■■□□ 2.05
RHBDD3-207ENST00000496342 LRRC9Q6ZRR7 1453 aa27.85■■■□□ 2.05
RHBDD3-207ENST00000496342 BCORL1Q5H9F3 1711 aa27.84■■■□□ 2.05
RHBDD3-207ENST00000496342 AFAP1Q8N556 730 aa27.83■■■□□ 2.05
RHBDD3-207ENST00000496342 MAGI2Q86UL8 1455 aa27.82■■■□□ 2.04
RHBDD3-207ENST00000496342 ABCA6Q8N139 1617 aa27.81■■■□□ 2.04
RHBDD3-207ENST00000496342 KANK4Q5T7N3 995 aaPredicted RBP27.81■■■□□ 2.04
RHBDD3-207ENST00000496342 MAP3K1Q13233 1512 aa27.81■■■□□ 2.04
RHBDD3-207ENST00000496342 ADAMTSL3P82987 1691 aa27.81■■■□□ 2.04
RHBDD3-207ENST00000496342 DIP2CQ9Y2E4 1556 aa27.79■■■□□ 2.04
RHBDD3-207ENST00000496342 CFDP1Q9UEE9 299 aaPredicted RBP27.79■■■□□ 2.04
RHBDD3-207ENST00000496342 KIDINS220Q9ULH0 1771 aa27.78■■■□□ 2.04
RHBDD3-207ENST00000496342 MADDQ8WXG6 1647 aa27.77■■■□□ 2.04
RHBDD3-207ENST00000496342 ARID4BQ4LE39 1312 aaPredicted RBP27.76■■■□□ 2.03
RHBDD3-207ENST00000496342 ZNF644Q9H582 1327 aaPredicted RBP27.75■■■□□ 2.03
RHBDD3-207ENST00000496342 HNRNPMP52272 730 aaKnown RBP eCLIP27.73■■■□□ 2.03
RHBDD3-207ENST00000496342 MYT1LQ9UL68 1186 aa27.72■■■□□ 2.03
RHBDD3-207ENST00000496342 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
RHBDD3-207ENST00000496342 ATP10AO60312 1499 aa27.71■■■□□ 2.03
RHBDD3-207ENST00000496342 MLH3Q9UHC1 1453 aa27.71■■■□□ 2.03
RHBDD3-207ENST00000496342 C9orf84Q5VXU9 1444 aa27.71■■■□□ 2.03
RHBDD3-207ENST00000496342 CAMSAP2Q08AD1 1489 aa27.7■■■□□ 2.02
RHBDD3-207ENST00000496342 PLEKHH2Q8IVE3 1493 aa27.7■■■□□ 2.02
RHBDD3-207ENST00000496342 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
RHBDD3-207ENST00000496342 KIAA1107Q9UPP5 1409 aa27.67■■■□□ 2.02
RHBDD3-207ENST00000496342 FER1L4A9Z1Z3 1794 aa27.66■■■□□ 2.02
RHBDD3-207ENST00000496342 ATP7AQ04656 1500 aa27.65■■■□□ 2.02
RHBDD3-207ENST00000496342 MBD5Q9P267 1494 aa27.64■■■□□ 2.02
RHBDD3-207ENST00000496342 APLP2Q06481 763 aa27.63■■■□□ 2.01
RHBDD3-207ENST00000496342 MLECQ14165 292 aa27.63■■■□□ 2.01
RHBDD3-207ENST00000496342 REREQ9P2R6 1566 aa27.63■■■□□ 2.01
RHBDD3-207ENST00000496342 PTPRMP28827 1452 aa27.6■■■□□ 2.01
RHBDD3-207ENST00000496342 SPAG9O60271 1321 aaKnown RBP27.6■■■□□ 2.01
RHBDD3-207ENST00000496342 MYOM3Q5VTT5 1437 aa27.58■■■□□ 2.01
RHBDD3-207ENST00000496342 ADGBQ8N7X0 1667 aa27.56■■■□□ 2
RHBDD3-207ENST00000496342 CCDC141Q6ZP82 1450 aa27.55■■■□□ 2
RHBDD3-207ENST00000496342 ARHGEF5Q12774 1597 aa27.54■■■□□ 2
RHBDD3-207ENST00000496342 AGLP35573 1532 aa27.51■■■□□ 2
RHBDD3-207ENST00000496342 PTPN23Q9H3S7 1636 aa27.51■■□□□ 1.99
RHBDD3-207ENST00000496342 PLXNC1O60486 1568 aa27.51■■□□□ 1.99
RHBDD3-207ENST00000496342 PLPPR3Q6T4P5 718 aa27.49■■□□□ 1.99
RHBDD3-207ENST00000496342 MIA2Q96PC5 1412 aa27.48■■□□□ 1.99
RHBDD3-207ENST00000496342 A2MP01023 1474 aa27.46■■□□□ 1.99
RHBDD3-207ENST00000496342 CROCC2H7BZ55 1655 aa27.45■■□□□ 1.98
RHBDD3-207ENST00000496342 RTEL1-TNFRSF6BF6WH68 1400 aa27.42■■□□□ 1.98
RHBDD3-207ENST00000496342 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
RHBDD3-207ENST00000496342 MAST1Q9Y2H9 1570 aa27.4■■□□□ 1.98
RHBDD3-207ENST00000496342 C3P01024 1663 aa27.4■■□□□ 1.98
RHBDD3-207ENST00000496342 PPARGC1BQ86YN6 1023 aaKnown RBP27.37■■□□□ 1.97
RHBDD3-207ENST00000496342 DNMT1P26358 1616 aaKnown RBP27.37■■□□□ 1.97
RHBDD3-207ENST00000496342 TCOF1Q13428 1488 aaKnown RBP27.37■■□□□ 1.97
RHBDD3-207ENST00000496342 CLTCQ00610 1675 aaKnown RBP27.36■■□□□ 1.97
RHBDD3-207ENST00000496342 CEBPAP49715 358 aaPredicted RBP27.34■■□□□ 1.97
RHBDD3-207ENST00000496342 RSPH4AQ5TD94 716 aa27.34■■□□□ 1.97
RHBDD3-207ENST00000496342 ABCC5O15440 1437 aa27.31■■□□□ 1.96
RHBDD3-207ENST00000496342 TSPY4P0CV99 314 aa27.3■■□□□ 1.96
RHBDD3-207ENST00000496342 TSPY10P0CW01 314 aa27.3■■□□□ 1.96
RHBDD3-207ENST00000496342 DHX29Q7Z478 1369 aaKnown RBP27.3■■□□□ 1.96
RHBDD3-207ENST00000496342 MROH2AA6NES4 1674 aa27.3■■□□□ 1.96
RHBDD3-207ENST00000496342 DAPK1P53355 1430 aa27.29■■□□□ 1.96
RHBDD3-207ENST00000496342 LMTK3Q96Q04 1460 aa27.28■■□□□ 1.96
RHBDD3-207ENST00000496342 PREX1Q8TCU6 1659 aa27.27■■□□□ 1.96
RHBDD3-207ENST00000496342 SHANK2Q9UPX8 1470 aa27.26■■□□□ 1.95
RHBDD3-207ENST00000496342 GGT6Q6P531 493 aa27.26■■□□□ 1.95
RHBDD3-207ENST00000496342 ESF1Q9H501 851 aaKnown RBP27.23■■□□□ 1.95
RHBDD3-207ENST00000496342 CNTLNQ9NXG0 1405 aa27.22■■□□□ 1.95
RHBDD3-207ENST00000496342 KIF3BO15066 747 aa27.21■■□□□ 1.95
RHBDD3-207ENST00000496342 FAM50AQ14320 339 aaKnown RBP27.21■■□□□ 1.95
RHBDD3-207ENST00000496342 RNF17Q9BXT8 1623 aaKnown RBP27.2■■□□□ 1.95
RHBDD3-207ENST00000496342 EIF2AK4Q9P2K8 1649 aaKnown RBP27.2■■□□□ 1.95
RHBDD3-207ENST00000496342 DUOX2Q9NRD8 1548 aa27.17■■□□□ 1.94
RHBDD3-207ENST00000496342 MROH1Q8NDA8 1641 aa27.17■■□□□ 1.94
RHBDD3-207ENST00000496342 CHIC2Q9UKJ5 165 aa27.17■■□□□ 1.94
RHBDD3-207ENST00000496342 SETD1BQ9UPS6 1966 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms