RNA–Protein interactions for RNA: ENST00000496183.5

RBM39-241, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-241ENST00000496183 PPP1R37O75864 691 aa12.69□□□□□ -0.38
RBM39-241ENST00000496183 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
RBM39-241ENST00000496183 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
RBM39-241ENST00000496183 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
RBM39-241ENST00000496183 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
RBM39-241ENST00000496183 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
RBM39-241ENST00000496183 DOK7Q18PE1 504 aa12.59□□□□□ -0.39
RBM39-241ENST00000496183 PCDH10Q9P2E7 1040 aa12.58□□□□□ -0.4
RBM39-241ENST00000496183 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
RBM39-241ENST00000496183 C2orf72A6NCS6 295 aa12.55□□□□□ -0.4
RBM39-241ENST00000496183 PDE4AP27815 886 aa12.55□□□□□ -0.4
RBM39-241ENST00000496183 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
RBM39-241ENST00000496183 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
RBM39-241ENST00000496183 KIF3CO14782 793 aa12.52□□□□□ -0.41
RBM39-241ENST00000496183 FOXK1P85037 733 aa12.49□□□□□ -0.41
RBM39-241ENST00000496183 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
RBM39-241ENST00000496183 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
RBM39-241ENST00000496183 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
RBM39-241ENST00000496183 ST18O60284 1047 aa12.44□□□□□ -0.42
RBM39-241ENST00000496183 PLCB2Q00722 1185 aa12.44□□□□□ -0.42
RBM39-241ENST00000496183 LARP6Q9BRS8 491 aaKnown RBP12.44□□□□□ -0.42
RBM39-241ENST00000496183 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
RBM39-241ENST00000496183 PLPP6Q8IY26 295 aa12.43□□□□□ -0.42
RBM39-241ENST00000496183 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
RBM39-241ENST00000496183 HOXB3P14651 431 aaPredicted RBP12.42□□□□□ -0.42
RBM39-241ENST00000496183 DSG2Q14126 1118 aa12.42□□□□□ -0.42
RBM39-241ENST00000496183 SLC34A2O95436 690 aa12.4□□□□□ -0.42
RBM39-241ENST00000496183 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
RBM39-241ENST00000496183 TBC1D12O60347 775 aa12.39□□□□□ -0.43
RBM39-241ENST00000496183 MFSD10Q14728 455 aa12.38□□□□□ -0.43
RBM39-241ENST00000496183 CADPS2Q86UW7 1296 aa12.38□□□□□ -0.43
RBM39-241ENST00000496183 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
RBM39-241ENST00000496183 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
RBM39-241ENST00000496183 EMP3P54852 163 aa12.35□□□□□ -0.43
RBM39-241ENST00000496183 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
RBM39-241ENST00000496183 PTCD2Q8WV60 388 aaKnown RBP12.32□□□□□ -0.44
RBM39-241ENST00000496183 PCDHGA4Q9Y5G9 962 aa12.31□□□□□ -0.44
RBM39-241ENST00000496183 HAP1P54257 671 aaPredicted RBP12.3□□□□□ -0.44
RBM39-241ENST00000496183 GPR153Q6NV75 609 aa12.3□□□□□ -0.44
RBM39-241ENST00000496183 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
RBM39-241ENST00000496183 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
RBM39-241ENST00000496183 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
RBM39-241ENST00000496183 ERBB3P21860 1342 aa12.27□□□□□ -0.45
RBM39-241ENST00000496183 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
RBM39-241ENST00000496183 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
RBM39-241ENST00000496183 OXER1Q8TDS5 423 aa12.24□□□□□ -0.45
RBM39-241ENST00000496183 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
RBM39-241ENST00000496183 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
RBM39-241ENST00000496183 NUDT7P0C024 238 aa12.23□□□□□ -0.45
RBM39-241ENST00000496183 E2F4Q16254 413 aa12.22□□□□□ -0.45
RBM39-241ENST00000496183 CAMK2BQ13554 666 aa12.21□□□□□ -0.45
RBM39-241ENST00000496183 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.46
RBM39-241ENST00000496183 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
RBM39-241ENST00000496183 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
RBM39-241ENST00000496183 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
RBM39-241ENST00000496183 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
RBM39-241ENST00000496183 EVI5O60447 810 aa12.14□□□□□ -0.47
RBM39-241ENST00000496183 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
RBM39-241ENST00000496183 DPYSL4O14531 572 aa12.11□□□□□ -0.47
RBM39-241ENST00000496183 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
RBM39-241ENST00000496183 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
RBM39-241ENST00000496183 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
RBM39-241ENST00000496183 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
RBM39-241ENST00000496183 KCNH8Q96L42 1107 aa12.09□□□□□ -0.47
RBM39-241ENST00000496183 KDM4FA0A1W2PPD8 638 aa12.08□□□□□ -0.48
RBM39-241ENST00000496183 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
RBM39-241ENST00000496183 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
RBM39-241ENST00000496183 ANO8Q9HCE9 1232 aaPredicted RBP12.07□□□□□ -0.48
RBM39-241ENST00000496183 ARHGEF1Q92888 912 aaKnown RBP12.06□□□□□ -0.48
RBM39-241ENST00000496183 PBX2P40425 430 aa12.05□□□□□ -0.48
RBM39-241ENST00000496183 MMRN1Q13201 1228 aa12.05□□□□□ -0.48
RBM39-241ENST00000496183 ZNF454Q8N9F8 522 aa12.05□□□□□ -0.48
RBM39-241ENST00000496183 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
RBM39-241ENST00000496183 PDIA6Q15084 440 aa12.04□□□□□ -0.48
RBM39-241ENST00000496183 POTEB3A0JP26 581 aa12.01□□□□□ -0.49
RBM39-241ENST00000496183 POTEBQ6S5H4 581 aa12.01□□□□□ -0.49
RBM39-241ENST00000496183 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
RBM39-241ENST00000496183 FOSBP53539 338 aa12□□□□□ -0.49
RBM39-241ENST00000496183 FBXW7Q969H0 707 aa12□□□□□ -0.49
RBM39-241ENST00000496183 PHF14O94880 888 aa11.99□□□□□ -0.49
RBM39-241ENST00000496183 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
RBM39-241ENST00000496183 EPAS1Q99814 870 aa11.99□□□□□ -0.49
RBM39-241ENST00000496183 PTGER2P43116 358 aa11.98□□□□□ -0.49
RBM39-241ENST00000496183 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
RBM39-241ENST00000496183 ARHGAP33O14559 1287 aa11.96□□□□□ -0.49
RBM39-241ENST00000496183 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
RBM39-241ENST00000496183 PTPREP23469 700 aa11.94□□□□□ -0.5
RBM39-241ENST00000496183 KDM2AQ9Y2K7 1162 aa11.94□□□□□ -0.5
RBM39-241ENST00000496183 DDX12PQ92771 950 aa11.93□□□□□ -0.5
RBM39-241ENST00000496183 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
RBM39-241ENST00000496183 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
RBM39-241ENST00000496183 PCDHGA10Q9Y5H3 936 aa11.92□□□□□ -0.5
RBM39-241ENST00000496183 NBR1Q14596 966 aa11.91□□□□□ -0.5
RBM39-241ENST00000496183 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
RBM39-241ENST00000496183 LSM11P83369 360 aaKnown RBP eCLIP11.9□□□□□ -0.55e-15■■□□□ 11.5
RBM39-241ENST00000496183 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
RBM39-241ENST00000496183 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
RBM39-241ENST00000496183 ADAM33Q9BZ11 813 aa11.87□□□□□ -0.51
RBM39-241ENST00000496183 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
RBM39-241ENST00000496183 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms