RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, human

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPM1F-208	ENST00000496143	KDM4F	A0A1W2PPD8	638 aa		33.75	■■■□□ 2.99
PPM1F-208	ENST00000496143	RICTOR	Q6R327	1708 aa		33.75	■■■□□ 2.99
PPM1F-208	ENST00000496143	PREX2	Q70Z35	1606 aa		33.74	■■■□□ 2.99
PPM1F-208	ENST00000496143	POGZ	Q7Z3K3	1410 aa		33.71	■■■□□ 2.99
PPM1F-208	ENST00000496143	EHBP1L1	Q8N3D4	1523 aa		33.7	■■■□□ 2.99
PPM1F-208	ENST00000496143	ZMYM4	Q5VZL5	1548 aa		33.69	■■■□□ 2.98
PPM1F-208	ENST00000496143	CDC42BPB	Q9Y5S2	1711 aa		33.68	■■■□□ 2.98
PPM1F-208	ENST00000496143	MAGI2	Q86UL8	1455 aa		33.66	■■■□□ 2.98
PPM1F-208	ENST00000496143	CDC42BPA	Q5VT25	1732 aa		33.65	■■■□□ 2.98
PPM1F-208	ENST00000496143	ARHGEF40	Q8TER5	1519 aa		33.64	■■■□□ 2.98
PPM1F-208	ENST00000496143	CCNB3	Q8WWL7	1395 aa		33.64	■■■□□ 2.98
PPM1F-208	ENST00000496143	ZNF518A	Q6AHZ1	1483 aa		33.63	■■■□□ 2.97
PPM1F-208	ENST00000496143	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.62	■■■□□ 2.97
PPM1F-208	ENST00000496143	TIAM1	Q13009	1591 aa		33.61	■■■□□ 2.97
PPM1F-208	ENST00000496143	ZFYVE16	Q7Z3T8	1539 aa		33.61	■■■□□ 2.97
PPM1F-208	ENST00000496143	ABCC1	P33527	1531 aa		33.58	■■■□□ 2.97
PPM1F-208	ENST00000496143	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.56	■■■□□ 2.96
PPM1F-208	ENST00000496143	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.55	■■■□□ 2.96
PPM1F-208	ENST00000496143	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.54	■■■□□ 2.96
PPM1F-208	ENST00000496143	MAP3K1	Q13233	1512 aa		33.53	■■■□□ 2.96
PPM1F-208	ENST00000496143	YEATS2	Q9ULM3	1422 aa		33.53	■■■□□ 2.96
PPM1F-208	ENST00000496143	KDM5C	P41229	1560 aa		33.52	■■■□□ 2.96
PPM1F-208	ENST00000496143	AFAP1	Q8N556	730 aa		33.52	■■■□□ 2.96
PPM1F-208	ENST00000496143	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.51	■■■□□ 2.96
PPM1F-208	ENST00000496143	PLEKHH2	Q8IVE3	1493 aa		33.5	■■■□□ 2.95
PPM1F-208	ENST00000496143	ITSN2	Q9NZM3	1697 aa		33.49	■■■□□ 2.95
PPM1F-208	ENST00000496143	MYT1L	Q9UL68	1186 aa		33.49	■■■□□ 2.95
PPM1F-208	ENST00000496143	LRRC9	Q6ZRR7	1453 aa		33.48	■■■□□ 2.95
PPM1F-208	ENST00000496143	ARHGEF12	Q9NZN5	1544 aa		33.48	■■■□□ 2.95
PPM1F-208	ENST00000496143	SAMD9L	Q8IVG5	1584 aa		33.47	■■■□□ 2.95
PPM1F-208	ENST00000496143	APLP2	Q06481	763 aa		33.47	■■■□□ 2.95
PPM1F-208	ENST00000496143	NCOA2	Q15596	1464 aa		33.47	■■■□□ 2.95
PPM1F-208	ENST00000496143	HECW2	Q9P2P5	1572 aa		33.46	■■■□□ 2.95
PPM1F-208	ENST00000496143	TRAPPC8	Q9Y2L5	1435 aa		33.45	■■■□□ 2.95
PPM1F-208	ENST00000496143	KIAA1107	Q9UPP5	1409 aa		33.45	■■■□□ 2.94
PPM1F-208	ENST00000496143	ATP10A	O60312	1499 aa		33.44	■■■□□ 2.94
PPM1F-208	ENST00000496143	MLH3	Q9UHC1	1453 aa		33.43	■■■□□ 2.94
PPM1F-208	ENST00000496143	SYCP2	Q9BX26	1530 aa		33.43	■■■□□ 2.94
PPM1F-208	ENST00000496143	C9orf84	Q5VXU9	1444 aa		33.42	■■■□□ 2.94
PPM1F-208	ENST00000496143	BCORL1	Q5H9F3	1711 aa		33.4	■■■□□ 2.94
PPM1F-208	ENST00000496143	ADAMTSL3	P82987	1691 aa		33.37	■■■□□ 2.93
PPM1F-208	ENST00000496143	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.37	■■■□□ 2.93
PPM1F-208	ENST00000496143	KANK4	Q5T7N3	995 aa	Predicted RBP	33.33	■■■□□ 2.93
PPM1F-208	ENST00000496143	DIP2C	Q9Y2E4	1556 aa		33.32	■■■□□ 2.92
PPM1F-208	ENST00000496143	SPAG9	O60271	1321 aa	Known RBP	33.31	■■■□□ 2.92
PPM1F-208	ENST00000496143	ZNF644	Q9H582	1327 aa	Predicted RBP	33.29	■■■□□ 2.92
PPM1F-208	ENST00000496143	RERE	Q9P2R6	1566 aa		33.29	■■■□□ 2.92
PPM1F-208	ENST00000496143	ABCA6	Q8N139	1617 aa		33.28	■■■□□ 2.92
PPM1F-208	ENST00000496143	SIGLEC1	Q9BZZ2	1709 aa		33.27	■■■□□ 2.92
PPM1F-208	ENST00000496143	MADD	Q8WXG6	1647 aa		33.27	■■■□□ 2.92
PPM1F-208	ENST00000496143	KIDINS220	Q9ULH0	1771 aa		33.26	■■■□□ 2.91
PPM1F-208	ENST00000496143	PTPRM	P28827	1452 aa		33.25	■■■□□ 2.91
PPM1F-208	ENST00000496143	MLEC	Q14165	292 aa		33.24	■■■□□ 2.91
PPM1F-208	ENST00000496143	CAMSAP2	Q08AD1	1489 aa		33.24	■■■□□ 2.91
PPM1F-208	ENST00000496143	MBD5	Q9P267	1494 aa		33.23	■■■□□ 2.91
PPM1F-208	ENST00000496143	ATP7A	Q04656	1500 aa		33.23	■■■□□ 2.91
PPM1F-208	ENST00000496143	RSPH4A	Q5TD94	716 aa		33.22	■■■□□ 2.91
PPM1F-208	ENST00000496143	MYOM3	Q5VTT5	1437 aa		33.19	■■■□□ 2.9
PPM1F-208	ENST00000496143	INO80	Q9ULG1	1556 aa	Predicted RBP	33.19	■■■□□ 2.9
PPM1F-208	ENST00000496143	MIA2	Q96PC5	1412 aa		33.19	■■■□□ 2.9
PPM1F-208	ENST00000496143	AGL	P35573	1532 aa		33.18	■■■□□ 2.9
PPM1F-208	ENST00000496143	CCDC141	Q6ZP82	1450 aa		33.18	■■■□□ 2.9
PPM1F-208	ENST00000496143	RIMS1	Q86UR5	1692 aa	Known RBP	33.17	■■■□□ 2.9
PPM1F-208	ENST00000496143	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.14	■■■□□ 2.9
PPM1F-208	ENST00000496143	FER1L4	A9Z1Z3	1794 aa		33.12	■■■□□ 2.89
PPM1F-208	ENST00000496143	ARHGEF5	Q12774	1597 aa		33.11	■■■□□ 2.89
PPM1F-208	ENST00000496143	A2M	P01023	1474 aa		33.08	■■■□□ 2.89
PPM1F-208	ENST00000496143	TSPY4	P0CV99	314 aa		33.07	■■■□□ 2.88
PPM1F-208	ENST00000496143	TSPY10	P0CW01	314 aa		33.07	■■■□□ 2.88
PPM1F-208	ENST00000496143	ESF1	Q9H501	851 aa	Known RBP	33.05	■■■□□ 2.88
PPM1F-208	ENST00000496143	ADGB	Q8N7X0	1667 aa		33.04	■■■□□ 2.88
PPM1F-208	ENST00000496143	PLXNC1	O60486	1568 aa		33.03	■■■□□ 2.88
PPM1F-208	ENST00000496143	PLPPR3	Q6T4P5	718 aa		32.99	■■■□□ 2.87
PPM1F-208	ENST00000496143	FGD6	Q6ZV73	1430 aa		32.97	■■■□□ 2.87
PPM1F-208	ENST00000496143	CNTLN	Q9NXG0	1405 aa		32.96	■■■□□ 2.87
PPM1F-208	ENST00000496143	PTPN23	Q9H3S7	1636 aa		32.96	■■■□□ 2.87
PPM1F-208	ENST00000496143	DHX29	Q7Z478	1369 aa	Known RBP	32.96	■■■□□ 2.87
PPM1F-208	ENST00000496143	MAST1	Q9Y2H9	1570 aa		32.93	■■■□□ 2.86
PPM1F-208	ENST00000496143	TCOF1	Q13428	1488 aa	Known RBP	32.9	■■■□□ 2.86
PPM1F-208	ENST00000496143	PPP6R1	Q9UPN7	881 aa		32.88	■■■□□ 2.85
PPM1F-208	ENST00000496143	GGT6	Q6P531	493 aa		32.87	■■■□□ 2.85
PPM1F-208	ENST00000496143	CEBPA	P49715	358 aa	Predicted RBP	32.85	■■■□□ 2.85
PPM1F-208	ENST00000496143	SHANK2	Q9UPX8	1470 aa		32.85	■■■□□ 2.85
PPM1F-208	ENST00000496143	LMTK3	Q96Q04	1460 aa		32.82	■■■□□ 2.84
PPM1F-208	ENST00000496143	KIF3B	O15066	747 aa		32.82	■■■□□ 2.84
PPM1F-208	ENST00000496143	ABCC5	O15440	1437 aa		32.82	■■■□□ 2.84
PPM1F-208	ENST00000496143	MROH2A	A6NES4	1674 aa		32.81	■■■□□ 2.84
PPM1F-208	ENST00000496143	DNMT1	P26358	1616 aa	Known RBP	32.8	■■■□□ 2.84
PPM1F-208	ENST00000496143	DAPK1	P53355	1430 aa		32.8	■■■□□ 2.84
PPM1F-208	ENST00000496143	C3	P01024	1663 aa		32.79	■■■□□ 2.84
PPM1F-208	ENST00000496143	CROCC2	H7BZ55	1655 aa		32.78	■■■□□ 2.84
PPM1F-208	ENST00000496143	ZMYM3	Q14202	1370 aa		32.76	■■■□□ 2.83
PPM1F-208	ENST00000496143	FAM50A	Q14320	339 aa	Known RBP	32.75	■■■□□ 2.83
PPM1F-208	ENST00000496143	FAM135A	Q9P2D6	1515 aa		32.74	■■■□□ 2.83
PPM1F-208	ENST00000496143	CLTC	Q00610	1675 aa	Known RBP	32.74	■■■□□ 2.83
PPM1F-208	ENST00000496143	PREX1	Q8TCU6	1659 aa		32.74	■■■□□ 2.83
PPM1F-208	ENST00000496143	DUOX2	Q9NRD8	1548 aa		32.73	■■■□□ 2.83
PPM1F-208	ENST00000496143	UHRF1BP1	Q6BDS2	1440 aa		32.72	■■■□□ 2.83
PPM1F-208	ENST00000496143	KIF15	Q9NS87	1388 aa		32.71	■■■□□ 2.83
PPM1F-208	ENST00000496143	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.7	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 462.9 ms