RNA–Protein interactions for RNA: ENST00000495990.5

TRABD2A-209, Transcript of TraB domain containing 2A, humanhuman

TSL 1 (best)

Gene TRABD2A, Length 3,060 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2A-209ENST00000495990 PSMD1Q99460 953 aa12.7□□□□□ -0.38
TRABD2A-209ENST00000495990 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
TRABD2A-209ENST00000495990 TRIM66O15016 1216 aa12.69□□□□□ -0.38
TRABD2A-209ENST00000495990 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
TRABD2A-209ENST00000495990 CCDC125Q86Z20 511 aa12.66□□□□□ -0.38
TRABD2A-209ENST00000495990 A6NJR5 290 aa12.65□□□□□ -0.38
TRABD2A-209ENST00000495990 BCCIPQ9P287 314 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRABD2A-209ENST00000495990 PROSER2Q86WR7 435 aaPredicted RBP12.63□□□□□ -0.39
TRABD2A-209ENST00000495990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRABD2A-209ENST00000495990 MCM6Q14566 821 aa12.62□□□□□ -0.39
TRABD2A-209ENST00000495990 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
TRABD2A-209ENST00000495990 PRDM16Q9HAZ2 1276 aa12.62□□□□□ -0.39
TRABD2A-209ENST00000495990 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
TRABD2A-209ENST00000495990 TICAM2Q86XR7 235 aa12.6□□□□□ -0.39
TRABD2A-209ENST00000495990 PPP1R1BQ9UD71 204 aaPredicted RBP12.59□□□□□ -0.39
TRABD2A-209ENST00000495990 SERPINA10Q9UK55 444 aa12.59□□□□□ -0.39
TRABD2A-209ENST00000495990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
TRABD2A-209ENST00000495990 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
TRABD2A-209ENST00000495990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
TRABD2A-209ENST00000495990 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
TRABD2A-209ENST00000495990 E2F4Q16254 413 aa12.55□□□□□ -0.4
TRABD2A-209ENST00000495990 ARIH1Q9Y4X5 557 aaPredicted RBP12.55□□□□□ -0.4
TRABD2A-209ENST00000495990 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
TRABD2A-209ENST00000495990 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
TRABD2A-209ENST00000495990 FNBP4Q8N3X1 1017 aaPredicted RBP12.52□□□□□ -0.41
TRABD2A-209ENST00000495990 PRDM10Q9NQV6 1147 aa12.51□□□□□ -0.41
TRABD2A-209ENST00000495990 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
TRABD2A-209ENST00000495990 MLLT3P42568 568 aaPredicted RBP12.5□□□□□ -0.41
TRABD2A-209ENST00000495990 IVNS1ABPQ9Y6Y0 642 aa12.5□□□□□ -0.41
TRABD2A-209ENST00000495990 BRD1O95696 1058 aa12.48□□□□□ -0.41
TRABD2A-209ENST00000495990 KIAA1522Q9P206 1035 aaPredicted RBP12.48□□□□□ -0.41
TRABD2A-209ENST00000495990 CLSTN1O94985 981 aa12.47□□□□□ -0.41
TRABD2A-209ENST00000495990 PKNOX2Q96KN3 472 aa12.46□□□□□ -0.41
TRABD2A-209ENST00000495990 NOL8Q76FK4 1167 aaKnown RBP12.46□□□□□ -0.42
TRABD2A-209ENST00000495990 FGD1P98174 961 aa12.45□□□□□ -0.42
TRABD2A-209ENST00000495990 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
TRABD2A-209ENST00000495990 IGSF5Q9NSI5 407 aa12.44□□□□□ -0.42
TRABD2A-209ENST00000495990 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
TRABD2A-209ENST00000495990 AMOTL2Q9Y2J4 779 aa12.43□□□□□ -0.42
TRABD2A-209ENST00000495990 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
TRABD2A-209ENST00000495990 ZNF662Q6ZS27 426 aa12.42□□□□□ -0.42
TRABD2A-209ENST00000495990 RFX1P22670 979 aa12.41□□□□□ -0.42
TRABD2A-209ENST00000495990 FOSBP53539 338 aa12.41□□□□□ -0.42
TRABD2A-209ENST00000495990 CC2D2BQ6DHV5 1058 aa12.41□□□□□ -0.42
TRABD2A-209ENST00000495990 MRRFQ96E11 262 aaKnown RBP12.41□□□□□ -0.42
TRABD2A-209ENST00000495990 DDRGK1Q96HY6 314 aa12.41□□□□□ -0.42
TRABD2A-209ENST00000495990 SPATA32Q96LK8 384 aa12.4□□□□□ -0.42
TRABD2A-209ENST00000495990 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
TRABD2A-209ENST00000495990 SIRT1Q96EB6 747 aa12.39□□□□□ -0.43
TRABD2A-209ENST00000495990 SKIV2LQ15477 1246 aaKnown RBP12.39□□□□□ -0.43
TRABD2A-209ENST00000495990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.38□□□□□ -0.43
TRABD2A-209ENST00000495990 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
TRABD2A-209ENST00000495990 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
TRABD2A-209ENST00000495990 ANKRD62A6NC57 917 aa12.36□□□□□ -0.43
TRABD2A-209ENST00000495990 MARCH6O60337 910 aa12.36□□□□□ -0.43
TRABD2A-209ENST00000495990 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
TRABD2A-209ENST00000495990 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
TRABD2A-209ENST00000495990 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
TRABD2A-209ENST00000495990 SMYD5Q6GMV2 418 aa12.34□□□□□ -0.43
TRABD2A-209ENST00000495990 SND1Q7KZF4 910 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRABD2A-209ENST00000495990 LOC102724159A0A0B4J2E5 919 aa12.32□□□□□ -0.44
TRABD2A-209ENST00000495990 PWP2Q15269 919 aaKnown RBP12.32□□□□□ -0.44
TRABD2A-209ENST00000495990 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
TRABD2A-209ENST00000495990 ANKRD13AQ8IZ07 590 aa12.31□□□□□ -0.44
TRABD2A-209ENST00000495990 PPP1R37O75864 691 aa12.31□□□□□ -0.44
TRABD2A-209ENST00000495990 COG6Q9Y2V7 657 aa12.3□□□□□ -0.44
TRABD2A-209ENST00000495990 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
TRABD2A-209ENST00000495990 CCDC102AQ96A19 550 aa12.29□□□□□ -0.44
TRABD2A-209ENST00000495990 NAP1L5Q96NT1 182 aaPredicted RBP12.27□□□□□ -0.44
TRABD2A-209ENST00000495990 POM121CA8CG34 1229 aa12.26□□□□□ -0.45
TRABD2A-209ENST00000495990 ACIN1Q9UKV3 1341 aaKnown RBP12.26□□□□□ -0.45
TRABD2A-209ENST00000495990 CALR3Q96L12 384 aaKnown RBP12.26□□□□□ -0.45
TRABD2A-209ENST00000495990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRABD2A-209ENST00000495990 GSE1Q14687 1217 aa12.25□□□□□ -0.45
TRABD2A-209ENST00000495990 MICAL1Q8TDZ2 1067 aa12.25□□□□□ -0.45
TRABD2A-209ENST00000495990 RIPOR2Q9Y4F9 1068 aa12.25□□□□□ -0.45
TRABD2A-209ENST00000495990 KCNA1Q09470 495 aa12.24□□□□□ -0.45
TRABD2A-209ENST00000495990 MS4A1P11836 297 aa12.24□□□□□ -0.45
TRABD2A-209ENST00000495990 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRABD2A-209ENST00000495990 PCMTD1Q96MG8 357 aaPredicted RBP12.24□□□□□ -0.45
TRABD2A-209ENST00000495990 RBM27Q9P2N5 1060 aaKnown RBP12.24□□□□□ -0.45
TRABD2A-209ENST00000495990 FAM50AQ14320 339 aaKnown RBP12.23□□□□□ -0.45
TRABD2A-209ENST00000495990 DRC1Q96MC2 740 aa12.23□□□□□ -0.45
TRABD2A-209ENST00000495990 HIRIP3Q9BW71 556 aaPredicted RBP12.23□□□□□ -0.45
TRABD2A-209ENST00000495990 RAB11FIP3O75154 756 aa12.22□□□□□ -0.45
TRABD2A-209ENST00000495990 PYGBP11216 843 aa12.22□□□□□ -0.45
TRABD2A-209ENST00000495990 SLC52A1Q9NWF4 448 aa12.22□□□□□ -0.45
TRABD2A-209ENST00000495990 TCF3P15923 654 aa12.21□□□□□ -0.45
TRABD2A-209ENST00000495990 TXNDC2Q86VQ3 553 aa12.21□□□□□ -0.45
TRABD2A-209ENST00000495990 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
TRABD2A-209ENST00000495990 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
TRABD2A-209ENST00000495990 PPME1Q9Y570 386 aa12.21□□□□□ -0.45
TRABD2A-209ENST00000495990 SNRKQ9NRH2 765 aa12.21□□□□□ -0.46
TRABD2A-209ENST00000495990 SREK1Q8WXA9 508 aaKnown RBP12.2□□□□□ -0.46
TRABD2A-209ENST00000495990 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
TRABD2A-209ENST00000495990 GDPD2Q9HCC8 539 aa12.2□□□□□ -0.46
TRABD2A-209ENST00000495990 NUBP1P53384 320 aa12.19□□□□□ -0.46
TRABD2A-209ENST00000495990 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
TRABD2A-209ENST00000495990 VTI1AQ96AJ9 217 aa12.19□□□□□ -0.46
TRABD2A-209ENST00000495990 GLMNQ92990 594 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms