RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 KDM4FA0A1W2PPD8 638 aa23.94■■□□□ 1.42
RAPGEF3-215ENST00000495953 GPATCH8Q9UKJ3 1502 aaKnown RBP23.93■■□□□ 1.42
RAPGEF3-215ENST00000495953 CDC42BPBQ9Y5S2 1711 aa23.93■■□□□ 1.42
RAPGEF3-215ENST00000495953 CFAP74Q9C0B2 1584 aa23.91■■□□□ 1.42
RAPGEF3-215ENST00000495953 PHLDB1Q86UU1 1377 aa23.89■■□□□ 1.41
RAPGEF3-215ENST00000495953 EFCAB2Q5VUJ9 269 aa23.88■■□□□ 1.41
RAPGEF3-215ENST00000495953 ARHGAP5Q13017 1502 aa23.88■■□□□ 1.41
RAPGEF3-215ENST00000495953 NEO1Q92859 1461 aa23.87■■□□□ 1.41
RAPGEF3-215ENST00000495953 MYOM3Q5VTT5 1437 aa23.87■■□□□ 1.41
RAPGEF3-215ENST00000495953 FANCAO15360 1455 aa23.87■■□□□ 1.41
RAPGEF3-215ENST00000495953 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
RAPGEF3-215ENST00000495953 CFDP1Q9UEE9 299 aaPredicted RBP23.85■■□□□ 1.41
RAPGEF3-215ENST00000495953 FRMPD1Q5SYB0 1578 aa23.85■■□□□ 1.41
RAPGEF3-215ENST00000495953 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
RAPGEF3-215ENST00000495953 AKNAQ7Z591 1439 aa23.8■■□□□ 1.4
RAPGEF3-215ENST00000495953 ADGRL1O94910 1474 aa23.79■■□□□ 1.4
RAPGEF3-215ENST00000495953 PLEKHH2Q8IVE3 1493 aa23.78■■□□□ 1.4
RAPGEF3-215ENST00000495953 FGD6Q6ZV73 1430 aa23.77■■□□□ 1.4
RAPGEF3-215ENST00000495953 RICTORQ6R327 1708 aa23.77■■□□□ 1.4
RAPGEF3-215ENST00000495953 RAPGEF3O95398 923 aa23.77■■□□□ 1.4
RAPGEF3-215ENST00000495953 SAMD9LQ8IVG5 1584 aa23.76■■□□□ 1.39
RAPGEF3-215ENST00000495953 ZNF777Q9ULD5 760 aaPredicted RBP23.75■■□□□ 1.39
RAPGEF3-215ENST00000495953 PTPN23Q9H3S7 1636 aa23.74■■□□□ 1.39
RAPGEF3-215ENST00000495953 KIAA1107Q9UPP5 1409 aa23.74■■□□□ 1.39
RAPGEF3-215ENST00000495953 ABCC1P33527 1531 aa23.73■■□□□ 1.39
RAPGEF3-215ENST00000495953 CAMSAP2Q08AD1 1489 aa23.72■■□□□ 1.39
RAPGEF3-215ENST00000495953 TCOF1Q13428 1488 aaKnown RBP23.72■■□□□ 1.39
RAPGEF3-215ENST00000495953 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.38
RAPGEF3-215ENST00000495953 DENND4BO75064 1496 aaPredicted RBP23.68■■□□□ 1.38
RAPGEF3-215ENST00000495953 RSPH4AQ5TD94 716 aa23.68■■□□□ 1.38
RAPGEF3-215ENST00000495953 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
RAPGEF3-215ENST00000495953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.38
RAPGEF3-215ENST00000495953 ZNF644Q9H582 1327 aaPredicted RBP23.67■■□□□ 1.38
RAPGEF3-215ENST00000495953 SYCP2Q9BX26 1530 aa23.67■■□□□ 1.38
RAPGEF3-215ENST00000495953 ARHGEF5Q12774 1597 aa23.65■■□□□ 1.38
RAPGEF3-215ENST00000495953 ARHGEF12Q9NZN5 1544 aa23.64■■□□□ 1.38
RAPGEF3-215ENST00000495953 ZNF518AQ6AHZ1 1483 aa23.64■■□□□ 1.38
RAPGEF3-215ENST00000495953 MBD5Q9P267 1494 aa23.64■■□□□ 1.38
RAPGEF3-215ENST00000495953 POGZQ7Z3K3 1410 aa23.64■■□□□ 1.37
RAPGEF3-215ENST00000495953 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.37
RAPGEF3-215ENST00000495953 HNRNPMP52272 730 aaKnown RBP eCLIP23.62■■□□□ 1.37
RAPGEF3-215ENST00000495953 ARHGEF40Q8TER5 1519 aa23.62■■□□□ 1.37
RAPGEF3-215ENST00000495953 ZMYM4Q5VZL5 1548 aa23.6■■□□□ 1.37
RAPGEF3-215ENST00000495953 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
RAPGEF3-215ENST00000495953 CCDC141Q6ZP82 1450 aa23.6■■□□□ 1.37
RAPGEF3-215ENST00000495953 TRAPPC8Q9Y2L5 1435 aa23.59■■□□□ 1.37
RAPGEF3-215ENST00000495953 KDM5CP41229 1560 aa23.59■■□□□ 1.37
RAPGEF3-215ENST00000495953 DNMT1P26358 1616 aaKnown RBP23.59■■□□□ 1.37
RAPGEF3-215ENST00000495953 YEATS2Q9ULM3 1422 aa23.59■■□□□ 1.37
RAPGEF3-215ENST00000495953 AFAP1Q8N556 730 aa23.55■■□□□ 1.36
RAPGEF3-215ENST00000495953 MAGI2Q86UL8 1455 aa23.55■■□□□ 1.36
RAPGEF3-215ENST00000495953 CROCC2H7BZ55 1655 aa23.54■■□□□ 1.36
RAPGEF3-215ENST00000495953 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
RAPGEF3-215ENST00000495953 DAPK1P53355 1430 aa23.54■■□□□ 1.36
RAPGEF3-215ENST00000495953 TSPY4P0CV99 314 aa23.54■■□□□ 1.36
RAPGEF3-215ENST00000495953 TSPY10P0CW01 314 aa23.54■■□□□ 1.36
RAPGEF3-215ENST00000495953 MLH3Q9UHC1 1453 aa23.53■■□□□ 1.36
RAPGEF3-215ENST00000495953 SHANK2Q9UPX8 1470 aa23.53■■□□□ 1.36
RAPGEF3-215ENST00000495953 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.36
RAPGEF3-215ENST00000495953 RTEL1-TNFRSF6BF6WH68 1400 aa23.52■■□□□ 1.36
RAPGEF3-215ENST00000495953 ABCC5O15440 1437 aa23.52■■□□□ 1.36
RAPGEF3-215ENST00000495953 BCORL1Q5H9F3 1711 aa23.52■■□□□ 1.36
RAPGEF3-215ENST00000495953 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
RAPGEF3-215ENST00000495953 SPAG9O60271 1321 aaKnown RBP23.51■■□□□ 1.35
RAPGEF3-215ENST00000495953 ADAMTSL3P82987 1691 aa23.51■■□□□ 1.35
RAPGEF3-215ENST00000495953 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
RAPGEF3-215ENST00000495953 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
RAPGEF3-215ENST00000495953 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
RAPGEF3-215ENST00000495953 KIDINS220Q9ULH0 1771 aa23.47■■□□□ 1.35
RAPGEF3-215ENST00000495953 C9orf84Q5VXU9 1444 aa23.46■■□□□ 1.35
RAPGEF3-215ENST00000495953 ADGBQ8N7X0 1667 aa23.44■■□□□ 1.34
RAPGEF3-215ENST00000495953 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
RAPGEF3-215ENST00000495953 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
RAPGEF3-215ENST00000495953 ARID4BQ4LE39 1312 aaPredicted RBP23.42■■□□□ 1.34
RAPGEF3-215ENST00000495953 PLXNC1O60486 1568 aa23.42■■□□□ 1.34
RAPGEF3-215ENST00000495953 DIP2CQ9Y2E4 1556 aa23.42■■□□□ 1.34
RAPGEF3-215ENST00000495953 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
RAPGEF3-215ENST00000495953 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
RAPGEF3-215ENST00000495953 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
RAPGEF3-215ENST00000495953 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
RAPGEF3-215ENST00000495953 ANKRD30AQ9BXX3 1397 aa23.4■■□□□ 1.34
RAPGEF3-215ENST00000495953 ITGAEP38570 1179 aa23.39■■□□□ 1.33
RAPGEF3-215ENST00000495953 ATP10AO60312 1499 aa23.38■■□□□ 1.33
RAPGEF3-215ENST00000495953 REREQ9P2R6 1566 aa23.37■■□□□ 1.33
RAPGEF3-215ENST00000495953 NCOA1Q15788 1441 aa23.37■■□□□ 1.33
RAPGEF3-215ENST00000495953 TRIM26Q12899 539 aaPredicted RBP23.37■■□□□ 1.33
RAPGEF3-215ENST00000495953 CHIC2Q9UKJ5 165 aa23.37■■□□□ 1.33
RAPGEF3-215ENST00000495953 PTPRMP28827 1452 aa23.35■■□□□ 1.33
RAPGEF3-215ENST00000495953 MLECQ14165 292 aa23.34■■□□□ 1.33
RAPGEF3-215ENST00000495953 FER1L4A9Z1Z3 1794 aa23.34■■□□□ 1.33
RAPGEF3-215ENST00000495953 DUOX2Q9NRD8 1548 aa23.32■■□□□ 1.32
RAPGEF3-215ENST00000495953 A2MP01023 1474 aa23.31■■□□□ 1.32
RAPGEF3-215ENST00000495953 DHX29Q7Z478 1369 aaKnown RBP23.31■■□□□ 1.32
RAPGEF3-215ENST00000495953 KIF15Q9NS87 1388 aa23.31■■□□□ 1.32
RAPGEF3-215ENST00000495953 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
RAPGEF3-215ENST00000495953 AGLP35573 1532 aa23.28■■□□□ 1.32
RAPGEF3-215ENST00000495953 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
RAPGEF3-215ENST00000495953 ERBINQ96RT1 1412 aa23.26■■□□□ 1.31
RAPGEF3-215ENST00000495953 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
RAPGEF3-215ENST00000495953 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms