RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 ARHGAP5Q13017 1502 aa31.49■■■□□ 2.63
LMO4-204ENST00000495705 AKNAQ7Z591 1439 aa31.48■■■□□ 2.63
LMO4-204ENST00000495705 EFCAB2Q5VUJ9 269 aa31.46■■■□□ 2.63
LMO4-204ENST00000495705 GPATCH8Q9UKJ3 1502 aaKnown RBP31.44■■■□□ 2.62
LMO4-204ENST00000495705 CCNB3Q8WWL7 1395 aa31.43■■■□□ 2.62
LMO4-204ENST00000495705 NCOA2Q15596 1464 aa31.43■■■□□ 2.62
LMO4-204ENST00000495705 ITSN2Q9NZM3 1697 aa31.43■■■□□ 2.62
LMO4-204ENST00000495705 ADGRL1O94910 1474 aa31.4■■■□□ 2.62
LMO4-204ENST00000495705 KANK4Q5T7N3 995 aaPredicted RBP31.4■■■□□ 2.62
LMO4-204ENST00000495705 DENND4BO75064 1496 aaPredicted RBP31.37■■■□□ 2.61
LMO4-204ENST00000495705 RICTORQ6R327 1708 aa31.35■■■□□ 2.61
LMO4-204ENST00000495705 FRMPD1Q5SYB0 1578 aa31.34■■■□□ 2.61
LMO4-204ENST00000495705 SCAPERQ9BY12 1400 aa31.32■■■□□ 2.61
LMO4-204ENST00000495705 ABCC1P33527 1531 aa31.31■■■□□ 2.6
LMO4-204ENST00000495705 CFDP1Q9UEE9 299 aaPredicted RBP31.31■■■□□ 2.6
LMO4-204ENST00000495705 RAPGEF3O95398 923 aa31.29■■■□□ 2.6
LMO4-204ENST00000495705 POGZQ7Z3K3 1410 aa31.29■■■□□ 2.6
LMO4-204ENST00000495705 SAMD9LQ8IVG5 1584 aa31.29■■■□□ 2.6
LMO4-204ENST00000495705 PLEKHH2Q8IVE3 1493 aa31.27■■■□□ 2.6
LMO4-204ENST00000495705 ZMYM4Q5VZL5 1548 aa31.24■■■□□ 2.59
LMO4-204ENST00000495705 ZNF777Q9ULD5 760 aaPredicted RBP31.24■■■□□ 2.59
LMO4-204ENST00000495705 ZNF518AQ6AHZ1 1483 aa31.23■■■□□ 2.59
LMO4-204ENST00000495705 MYOM3Q5VTT5 1437 aa31.21■■■□□ 2.59
LMO4-204ENST00000495705 KIAA1107Q9UPP5 1409 aa31.2■■■□□ 2.59
LMO4-204ENST00000495705 SYCP2Q9BX26 1530 aa31.19■■■□□ 2.58
LMO4-204ENST00000495705 ARHGEF12Q9NZN5 1544 aa31.19■■■□□ 2.58
LMO4-204ENST00000495705 KDM5CP41229 1560 aa31.18■■■□□ 2.58
LMO4-204ENST00000495705 MAGI2Q86UL8 1455 aa31.17■■■□□ 2.58
LMO4-204ENST00000495705 MIA2Q96PC5 1412 aa31.16■■■□□ 2.58
LMO4-204ENST00000495705 CAMSAP2Q08AD1 1489 aa31.14■■■□□ 2.58
LMO4-204ENST00000495705 ARHGEF40Q8TER5 1519 aa31.14■■■□□ 2.58
LMO4-204ENST00000495705 TRAPPC8Q9Y2L5 1435 aa31.14■■■□□ 2.58
LMO4-204ENST00000495705 ZFYVE16Q7Z3T8 1539 aa31.12■■■□□ 2.57
LMO4-204ENST00000495705 HECW2Q9P2P5 1572 aa31.11■■■□□ 2.57
LMO4-204ENST00000495705 ZNF644Q9H582 1327 aaPredicted RBP31.1■■■□□ 2.57
LMO4-204ENST00000495705 AFAP1Q8N556 730 aa31.1■■■□□ 2.57
LMO4-204ENST00000495705 HNRNPMP52272 730 aaKnown RBP eCLIP31.08■■■□□ 2.57
LMO4-204ENST00000495705 MBD5Q9P267 1494 aa31.07■■■□□ 2.56
LMO4-204ENST00000495705 MLH3Q9UHC1 1453 aa31.07■■■□□ 2.56
LMO4-204ENST00000495705 FGD6Q6ZV73 1430 aa31.05■■■□□ 2.56
LMO4-204ENST00000495705 PTPN23Q9H3S7 1636 aa31.03■■■□□ 2.56
LMO4-204ENST00000495705 YEATS2Q9ULM3 1422 aa31.03■■■□□ 2.56
LMO4-204ENST00000495705 ARHGEF5Q12774 1597 aa31.03■■■□□ 2.56
LMO4-204ENST00000495705 CCDC141Q6ZP82 1450 aa31.01■■■□□ 2.56
LMO4-204ENST00000495705 RSPH4AQ5TD94 716 aa31■■■□□ 2.55
LMO4-204ENST00000495705 KIDINS220Q9ULH0 1771 aa31■■■□□ 2.55
LMO4-204ENST00000495705 INO80Q9ULG1 1556 aaPredicted RBP30.98■■■□□ 2.55
LMO4-204ENST00000495705 TCOF1Q13428 1488 aaKnown RBP30.98■■■□□ 2.55
LMO4-204ENST00000495705 MYT1LQ9UL68 1186 aa30.98■■■□□ 2.55
LMO4-204ENST00000495705 SPAG9O60271 1321 aaKnown RBP30.98■■■□□ 2.55
LMO4-204ENST00000495705 ATP7AQ04656 1500 aa30.97■■■□□ 2.55
LMO4-204ENST00000495705 DIP2CQ9Y2E4 1556 aa30.96■■■□□ 2.55
LMO4-204ENST00000495705 ABCA6Q8N139 1617 aa30.96■■■□□ 2.55
LMO4-204ENST00000495705 ATP10AO60312 1499 aa30.95■■■□□ 2.55
LMO4-204ENST00000495705 C9orf84Q5VXU9 1444 aa30.93■■■□□ 2.54
LMO4-204ENST00000495705 PPARGC1BQ86YN6 1023 aaKnown RBP30.93■■■□□ 2.54
LMO4-204ENST00000495705 REREQ9P2R6 1566 aa30.92■■■□□ 2.54
LMO4-204ENST00000495705 RTEL1-TNFRSF6BF6WH68 1400 aa30.9■■■□□ 2.54
LMO4-204ENST00000495705 MAST1Q9Y2H9 1570 aa30.87■■■□□ 2.53
LMO4-204ENST00000495705 TSPY4P0CV99 314 aa30.86■■■□□ 2.53
LMO4-204ENST00000495705 TSPY10P0CW01 314 aa30.86■■■□□ 2.53
LMO4-204ENST00000495705 DNMT1P26358 1616 aaKnown RBP30.86■■■□□ 2.53
LMO4-204ENST00000495705 SIGLEC1Q9BZZ2 1709 aa30.85■■■□□ 2.53
LMO4-204ENST00000495705 CROCC2H7BZ55 1655 aa30.85■■■□□ 2.53
LMO4-204ENST00000495705 ADGBQ8N7X0 1667 aa30.84■■■□□ 2.53
LMO4-204ENST00000495705 ARID4BQ4LE39 1312 aaPredicted RBP30.83■■■□□ 2.53
LMO4-204ENST00000495705 SHANK2Q9UPX8 1470 aa30.82■■■□□ 2.52
LMO4-204ENST00000495705 BCORL1Q5H9F3 1711 aa30.81■■■□□ 2.52
LMO4-204ENST00000495705 DAPK1P53355 1430 aa30.81■■■□□ 2.52
LMO4-204ENST00000495705 ABCC5O15440 1437 aa30.8■■■□□ 2.52
LMO4-204ENST00000495705 AGLP35573 1532 aa30.78■■■□□ 2.52
LMO4-204ENST00000495705 FAM50AQ14320 339 aaKnown RBP30.78■■■□□ 2.52
LMO4-204ENST00000495705 PLXNC1O60486 1568 aa30.77■■■□□ 2.52
LMO4-204ENST00000495705 A2MP01023 1474 aa30.76■■■□□ 2.52
LMO4-204ENST00000495705 KDM4FA0A1W2PPD8 638 aa30.75■■■□□ 2.51
LMO4-204ENST00000495705 ADAMTSL3P82987 1691 aa30.74■■■□□ 2.51
LMO4-204ENST00000495705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.74■■■□□ 2.511e-6■■■■■ 32.9
LMO4-204ENST00000495705 RRBP1Q9P2E9 1410 aaKnown RBP30.73■■■□□ 2.51
LMO4-204ENST00000495705 DHX29Q7Z478 1369 aaKnown RBP30.67■■■□□ 2.5
LMO4-204ENST00000495705 MADDQ8WXG6 1647 aa30.66■■■□□ 2.5
LMO4-204ENST00000495705 FER1L4A9Z1Z3 1794 aa30.64■■■□□ 2.49
LMO4-204ENST00000495705 MLECQ14165 292 aa30.63■■■□□ 2.49
LMO4-204ENST00000495705 ADGRL2O95490 1459 aa30.63■■■□□ 2.49
LMO4-204ENST00000495705 ANKRD30AQ9BXX3 1397 aa30.62■■■□□ 2.49
LMO4-204ENST00000495705 DUOX2Q9NRD8 1548 aa30.62■■■□□ 2.49
LMO4-204ENST00000495705 KIF15Q9NS87 1388 aa30.6■■■□□ 2.49
LMO4-204ENST00000495705 RIMS1Q86UR5 1692 aaKnown RBP30.58■■■□□ 2.49
LMO4-204ENST00000495705 EIF2AK4Q9P2K8 1649 aaKnown RBP30.58■■■□□ 2.49
LMO4-204ENST00000495705 CHIC2Q9UKJ5 165 aa30.58■■■□□ 2.49
LMO4-204ENST00000495705 NCOA1Q15788 1441 aa30.56■■■□□ 2.48
LMO4-204ENST00000495705 AEBP2Q6ZN18 517 aaPredicted RBP30.55■■■□□ 2.48
LMO4-204ENST00000495705 PTPRKQ15262 1439 aa30.55■■■□□ 2.48
LMO4-204ENST00000495705 ERBINQ96RT1 1412 aa30.54■■■□□ 2.48
LMO4-204ENST00000495705 RRP7BPQ9NSQ0 103 aa30.53■■■□□ 2.48
LMO4-204ENST00000495705 PTPRMP28827 1452 aa30.52■■■□□ 2.48
LMO4-204ENST00000495705 KIF3BO15066 747 aa30.51■■■□□ 2.47
LMO4-204ENST00000495705 ROCK1Q13464 1354 aa30.51■■■□□ 2.47
LMO4-204ENST00000495705 RNF17Q9BXT8 1623 aaKnown RBP30.5■■■□□ 2.47
LMO4-204ENST00000495705 CNTLNQ9NXG0 1405 aa30.48■■■□□ 2.47
LMO4-204ENST00000495705 ITGAEP38570 1179 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms