RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 YEATS2Q9ULM3 1422 aa17.41■□□□□ 0.38
RFTN1-211ENST00000495666 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
RFTN1-211ENST00000495666 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
RFTN1-211ENST00000495666 ADAMTSL3P82987 1691 aa17.4■□□□□ 0.38
RFTN1-211ENST00000495666 SIGLEC1Q9BZZ2 1709 aa17.4■□□□□ 0.38
RFTN1-211ENST00000495666 TROQ12816 1431 aaPredicted RBP17.39■□□□□ 0.38
RFTN1-211ENST00000495666 PLCH2O75038 1416 aa17.38■□□□□ 0.37
RFTN1-211ENST00000495666 PTPRMP28827 1452 aa17.37■□□□□ 0.37
RFTN1-211ENST00000495666 POGZQ7Z3K3 1410 aa17.36■□□□□ 0.37
RFTN1-211ENST00000495666 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
RFTN1-211ENST00000495666 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
RFTN1-211ENST00000495666 CASKIN1Q8WXD9 1431 aa17.35■□□□□ 0.37
RFTN1-211ENST00000495666 ZMYM4Q5VZL5 1548 aa17.35■□□□□ 0.37
RFTN1-211ENST00000495666 CCDC18Q5T9S5 1454 aa17.34■□□□□ 0.37
RFTN1-211ENST00000495666 FER1L4A9Z1Z3 1794 aa17.33■□□□□ 0.36
RFTN1-211ENST00000495666 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
RFTN1-211ENST00000495666 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
RFTN1-211ENST00000495666 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
RFTN1-211ENST00000495666 CDC42BPAQ5VT25 1732 aa17.3■□□□□ 0.36
RFTN1-211ENST00000495666 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
RFTN1-211ENST00000495666 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.36
RFTN1-211ENST00000495666 ZNF518AQ6AHZ1 1483 aa17.26■□□□□ 0.35
RFTN1-211ENST00000495666 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
RFTN1-211ENST00000495666 C9orf84Q5VXU9 1444 aa17.24■□□□□ 0.35
RFTN1-211ENST00000495666 ABCC1P33527 1531 aa17.24■□□□□ 0.35
RFTN1-211ENST00000495666 ABCA6Q8N139 1617 aa17.24■□□□□ 0.35
RFTN1-211ENST00000495666 ATP10AO60312 1499 aa17.24■□□□□ 0.35
RFTN1-211ENST00000495666 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
RFTN1-211ENST00000495666 TRAPPC8Q9Y2L5 1435 aa17.22■□□□□ 0.35
RFTN1-211ENST00000495666 ILDR1Q86SU0 546 aaPredicted RBP17.22■□□□□ 0.35
RFTN1-211ENST00000495666 DIP2CQ9Y2E4 1556 aa17.22■□□□□ 0.35
RFTN1-211ENST00000495666 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
RFTN1-211ENST00000495666 KDM5CP41229 1560 aa17.21■□□□□ 0.35
RFTN1-211ENST00000495666 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
RFTN1-211ENST00000495666 HSPA2P54652 639 aa17.21■□□□□ 0.35
RFTN1-211ENST00000495666 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.34
RFTN1-211ENST00000495666 SAMD9LQ8IVG5 1584 aa17.2■□□□□ 0.34
RFTN1-211ENST00000495666 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
RFTN1-211ENST00000495666 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
RFTN1-211ENST00000495666 CEBPAP49715 358 aaPredicted RBP17.18■□□□□ 0.34
RFTN1-211ENST00000495666 HNRNPMP52272 730 aaKnown RBP eCLIP17.17■□□□□ 0.34
RFTN1-211ENST00000495666 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
RFTN1-211ENST00000495666 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
RFTN1-211ENST00000495666 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
RFTN1-211ENST00000495666 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
RFTN1-211ENST00000495666 CFDP1Q9UEE9 299 aaPredicted RBP17.14■□□□□ 0.33
RFTN1-211ENST00000495666 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
RFTN1-211ENST00000495666 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
RFTN1-211ENST00000495666 TIAM1Q13009 1591 aa17.12■□□□□ 0.33
RFTN1-211ENST00000495666 MLH3Q9UHC1 1453 aa17.11■□□□□ 0.33
RFTN1-211ENST00000495666 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
RFTN1-211ENST00000495666 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
RFTN1-211ENST00000495666 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
RFTN1-211ENST00000495666 C3P01024 1663 aa17.09■□□□□ 0.33
RFTN1-211ENST00000495666 ATP7AQ04656 1500 aa17.07■□□□□ 0.32
RFTN1-211ENST00000495666 REREQ9P2R6 1566 aa17.06■□□□□ 0.32
RFTN1-211ENST00000495666 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-211ENST00000495666 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
RFTN1-211ENST00000495666 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
RFTN1-211ENST00000495666 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
RFTN1-211ENST00000495666 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.31
RFTN1-211ENST00000495666 GGT6Q6P531 493 aa17.01■□□□□ 0.31
RFTN1-211ENST00000495666 AGLP35573 1532 aa17.01■□□□□ 0.31
RFTN1-211ENST00000495666 A2MP01023 1474 aa16.99■□□□□ 0.31
RFTN1-211ENST00000495666 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
RFTN1-211ENST00000495666 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
RFTN1-211ENST00000495666 ADGBQ8N7X0 1667 aa16.98■□□□□ 0.31
RFTN1-211ENST00000495666 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
RFTN1-211ENST00000495666 PLXNC1O60486 1568 aa16.95■□□□□ 0.3
RFTN1-211ENST00000495666 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
RFTN1-211ENST00000495666 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
RFTN1-211ENST00000495666 SETD1BQ9UPS6 1966 aaKnown RBP16.93■□□□□ 0.3
RFTN1-211ENST00000495666 KANK4Q5T7N3 995 aaPredicted RBP16.93■□□□□ 0.3
RFTN1-211ENST00000495666 MROH2AA6NES4 1674 aa16.93■□□□□ 0.3
RFTN1-211ENST00000495666 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
RFTN1-211ENST00000495666 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
RFTN1-211ENST00000495666 FBXO41Q8TF61 875 aa16.92■□□□□ 0.3
RFTN1-211ENST00000495666 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
RFTN1-211ENST00000495666 ZMYM3Q14202 1370 aa16.9■□□□□ 0.3
RFTN1-211ENST00000495666 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
RFTN1-211ENST00000495666 KIF3BO15066 747 aa16.88■□□□□ 0.29
RFTN1-211ENST00000495666 APLP2Q06481 763 aa16.87■□□□□ 0.29
RFTN1-211ENST00000495666 CAMSAP1Q5T5Y3 1602 aa16.86■□□□□ 0.29
RFTN1-211ENST00000495666 CERKQ8TCT0 537 aa16.85■□□□□ 0.29
RFTN1-211ENST00000495666 TSPY4P0CV99 314 aa16.84■□□□□ 0.29
RFTN1-211ENST00000495666 TSPY10P0CW01 314 aa16.84■□□□□ 0.29
RFTN1-211ENST00000495666 RTEL1-TNFRSF6BF6WH68 1400 aa16.83■□□□□ 0.28
RFTN1-211ENST00000495666 ARHGEF5Q12774 1597 aa16.83■□□□□ 0.28
RFTN1-211ENST00000495666 CEP170BQ9Y4F5 1589 aaPredicted RBP16.82■□□□□ 0.28
RFTN1-211ENST00000495666 DHX29Q7Z478 1369 aaKnown RBP16.82■□□□□ 0.28
RFTN1-211ENST00000495666 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
RFTN1-211ENST00000495666 NPATQ14207 1427 aa16.81■□□□□ 0.28
RFTN1-211ENST00000495666 PTPRKQ15262 1439 aa16.81■□□□□ 0.28
RFTN1-211ENST00000495666 MYOM3Q5VTT5 1437 aa16.81■□□□□ 0.28
RFTN1-211ENST00000495666 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
RFTN1-211ENST00000495666 ZNF142P52746 1687 aaPredicted RBP16.81■□□□□ 0.28
RFTN1-211ENST00000495666 FBXO31Q5XUX0 539 aaPredicted RBP16.8■□□□□ 0.28
RFTN1-211ENST00000495666 CFAP65Q6ZU64 1925 aaKnown RBP16.8■□□□□ 0.28
RFTN1-211ENST00000495666 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
RFTN1-211ENST00000495666 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms